© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|270 |
| Gene name | |
| Location | Contig_100:6898..8199 |
| Strand | - |
| Gene length (bp) | 1301 |
| Transcript length (bp) | 1221 |
| Coding sequence length (bp) | 1221 |
| Protein length (aa) | 407 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03124 | EXS | EXS family | 4.5E-108 | 18 | 379 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTD8|ERD11_SCHPO | Protein ERD1 homolog 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erd1 PE=3 SV=2 | 6 | 382 | 1.0E-38 |
| sp|Q10151|ERD12_SCHPO | Protein ERD1 homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1D4.05c PE=3 SV=1 | 20 | 379 | 8.0E-33 |
| sp|P41771|ERD1_KLULA | Protein ERD1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ERD1 PE=3 SV=1 | 130 | 380 | 1.0E-24 |
| sp|Q55B06|SPXS1_DICDI | SPX and EXS domain-containing protein 1 OS=Dictyostelium discoideum GN=DDB_G0271664 PE=3 SV=2 | 8 | 380 | 2.0E-24 |
| sp|Q54G02|SPXS5_DICDI | SPX and EXS domain-containing protein 5 OS=Dictyostelium discoideum GN=DDB_G0290647 PE=3 SV=2 | 96 | 382 | 3.0E-24 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UTD8|ERD11_SCHPO | Protein ERD1 homolog 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erd1 PE=3 SV=2 | 6 | 382 | 1.0E-38 |
| sp|Q10151|ERD12_SCHPO | Protein ERD1 homolog 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1D4.05c PE=3 SV=1 | 20 | 379 | 8.0E-33 |
| sp|P41771|ERD1_KLULA | Protein ERD1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ERD1 PE=3 SV=1 | 130 | 380 | 1.0E-24 |
| sp|Q55B06|SPXS1_DICDI | SPX and EXS domain-containing protein 1 OS=Dictyostelium discoideum GN=DDB_G0271664 PE=3 SV=2 | 8 | 380 | 2.0E-24 |
| sp|Q54G02|SPXS5_DICDI | SPX and EXS domain-containing protein 5 OS=Dictyostelium discoideum GN=DDB_G0290647 PE=3 SV=2 | 96 | 382 | 3.0E-24 |
| sp|A7XZ53|XPR1_MUSPA | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus pahari GN=Xpr1 PE=1 SV=1 | 77 | 382 | 4.0E-22 |
| sp|Q9QZ71|XPR1_MUSTR | Xenotropic and polytropic retrovirus receptor 1 OS=Mus terricolor GN=Xpr1 PE=1 SV=1 | 77 | 382 | 5.0E-20 |
| sp|Q9R032|XPR1_MUSSP | Xenotropic and polytropic retrovirus receptor 1 OS=Mus spretus GN=Xpr1 PE=1 SV=1 | 77 | 380 | 9.0E-20 |
| sp|Q9UBH6|XPR1_HUMAN | Xenotropic and polytropic retrovirus receptor 1 OS=Homo sapiens GN=XPR1 PE=1 SV=1 | 77 | 382 | 2.0E-19 |
| sp|Q9QZ70|XPR1_CRIGR | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Cricetulus griseus GN=XPR1 PE=2 SV=1 | 77 | 382 | 4.0E-19 |
| sp|Q9Z0U0|XPR1_MOUSE | Xenotropic and polytropic retrovirus receptor 1 OS=Mus musculus GN=Xpr1 PE=1 SV=1 | 77 | 382 | 5.0E-19 |
| sp|Q6DD44|XPR1_XENLA | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus laevis GN=xpr1 PE=2 SV=1 | 106 | 382 | 7.0E-19 |
| sp|A8DZH4|XPR1_DANRE | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Danio rerio GN=xpr1 PE=3 SV=1 | 77 | 382 | 8.0E-19 |
| sp|Q9TU72|XPR1_NEOVI | Xenotropic and polytropic retrovirus receptor 1 OS=Neovison vison GN=XPR1 PE=2 SV=1 | 77 | 382 | 9.0E-19 |
| sp|Q28CY9|XPR1_XENTR | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Xenopus tropicalis GN=xpr1 PE=2 SV=1 | 106 | 382 | 2.0E-18 |
| sp|Q9R031|XPR1_MUSMC | Xenotropic and polytropic retrovirus receptor 1 homolog OS=Mus musculus castaneus GN=Xpr1 PE=2 SV=1 | 77 | 382 | 3.0E-17 |
| sp|P16151|ERD1_YEAST | Protein ERD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERD1 PE=1 SV=3 | 16 | 378 | 3.0E-15 |
| sp|Q9UU86|SYG1_SCHPO | Protein SYG1 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1827.07c PE=3 SV=1 | 104 | 380 | 5.0E-15 |
| sp|Q6R8G7|PHO13_ARATH | Phosphate transporter PHO1 homolog 3 OS=Arabidopsis thaliana GN=PHO1;H3 PE=2 SV=2 | 7 | 382 | 4.0E-14 |
| sp|P40528|SYG1_YEAST | Protein SYG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SYG1 PE=1 SV=1 | 26 | 380 | 1.0E-13 |
| sp|Q6R8G2|PHO18_ARATH | Phosphate transporter PHO1 homolog 8 OS=Arabidopsis thaliana GN=PHO1-H8 PE=2 SV=1 | 103 | 382 | 3.0E-13 |
| sp|Q54MJ9|SPXS3_DICDI | SPX and EXS domain-containing protein 3 OS=Dictyostelium discoideum GN=xpr1 PE=3 SV=1 | 16 | 380 | 4.0E-13 |
| sp|Q6K991|PHO12_ORYSJ | Phosphate transporter PHO1-2 OS=Oryza sativa subsp. japonica GN=PHO1-2 PE=2 SV=1 | 27 | 382 | 1.0E-12 |
| sp|Q6R8G3|PHO17_ARATH | Phosphate transporter PHO1 homolog 7 OS=Arabidopsis thaliana GN=PHO1-H7 PE=2 SV=1 | 103 | 382 | 3.0E-12 |
| sp|Q8S403|PHO1_ARATH | Phosphate transporter PHO1 OS=Arabidopsis thaliana GN=PHO1 PE=2 SV=1 | 10 | 382 | 2.0E-11 |
| sp|Q6R8G6|PHO14_ARATH | Phosphate transporter PHO1 homolog 4 OS=Arabidopsis thaliana GN=PHO1-H4 PE=2 SV=1 | 18 | 382 | 3.0E-10 |
| sp|Q54HI2|SPXS4_DICDI | SPX and EXS domain-containing protein 4 OS=Dictyostelium discoideum GN=DDB_G0289423 PE=3 SV=1 | 105 | 381 | 4.0E-10 |
| sp|Q93ZF5|PHO11_ARATH | Phosphate transporter PHO1 homolog 1 OS=Arabidopsis thaliana GN=PHO1-H1 PE=2 SV=1 | 154 | 380 | 5.0E-08 |
| sp|Q6R8G8|PHO12_ARATH | Phosphate transporter PHO1 homolog 2 OS=Arabidopsis thaliana GN=PHO1-H2 PE=2 SV=2 | 154 | 380 | 5.0E-08 |
| sp|Q9LJW0|PHO19_ARATH | Phosphate transporter PHO1 homolog 9 OS=Arabidopsis thaliana GN=PHO1-H9 PE=2 SV=1 | 18 | 382 | 4.0E-07 |
| sp|Q86HQ3|SPXS2_DICDI | SPX and EXS domain-containing protein 2 OS=Dictyostelium discoideum GN=DDB_G0274481 PE=3 SV=1 | 117 | 406 | 4.0E-07 |
| sp|Q6R8G5|PHO15_ARATH | Phosphate transporter PHO1 homolog 5 OS=Arabidopsis thaliana GN=PHO1-H5 PE=2 SV=2 | 154 | 382 | 7.0E-07 |
| sp|Q651J5|PHO13_ORYSJ | Phosphate transporter PHO1-3 OS=Oryza sativa subsp. japonica GN=PHO1-3 PE=2 SV=1 | 235 | 382 | 1.0E-06 |
| sp|Q657S5|PHO11_ORYSJ | Phosphate transporter PHO1-1 OS=Oryza sativa subsp. japonica GN=PHO1-1 PE=2 SV=2 | 154 | 382 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 42 | 22 |
| 2 | 73 | 95 | 22 |
| 3 | 99 | 121 | 22 |
| 4 | 266 | 288 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|270 MDGDAAVEPQLDSFSLAFPLPYRVGFIVTLGVWGWGLNLHYLGLAKIDVAGLIGYAGRSSQQQGGAQASTYRLAS LLSGLLGVSLTLFWLATWRVPQRVVAYDWLPVTYLAAVVATMLVPLRSLPSRGRQCFLATLRRIGLGGIAEAPEA RFRDILLADVLTSYAKVCGDVFVALCMFVRPGSSATQRPDRNCGGRIVVPLLMGLPSLMRLRQCLTDYVRVRRAP RNASTGWGGQHLANALKYSTAFPVILSSSLQRNLESPEAKAAWYRAWLVAVVVNSLYSFYWDVTMDWSLTLLASK RLRNAPQHAWGLRQPLLFSPLSLYYTAVVVDLALRCTWSMKLSPHLDKFSDFESGIFLIEFLEVFRRWLWIFLRV ETESIKKHCALDHDNALVLLGDYHDRYEDEA* |
| Coding | >OphauB2|270 ATGGACGGCGACGCAGCGGTTGAGCCTCAGCTCGACTCGTTCAGCCTGGCGTTTCCGCTGCCCTACCGGGTGGGC TTTATTGTCACTTTGGGCGTCTGGGGCTGGGGCCTCAACCTGCACTACCTCGGACTGGCCAAGATTGACGTTGCA GGCCTGATAGGATACGCGGGTCGCTCCTCGCAGCAGCAGGGCGGCGCTCAGGCATCGACTTACCGGCTGGCGAGT CTGCTGTCGGGCCTGCTGGGCGTGTCGCTGACGCTGTTTTGGCTGGCGACGTGGCGCGTCCCCCAGCGCGTCGTG GCGTACGACTGGCTGCCCGTGACATATCTGGCAGCCGTGGTGGCGACCATGTTGGTGCCTCTGCGCAGCCTGCCG AGCCGGGGACGACAATGCTTCCTGGCGACGCTGCGGCGCATCGGGCTGGGCGGCATAGCGGAAGCGCCCGAGGCG CGGTTCAGAGACATACTGTTGGCCGACGTGCTCACGTCGTACGCCAAGGTGTGCGGCGACGTCTTTGTTGCGCTG TGCATGTTTGTGAGGCCCGGCAGCTCGGCGACGCAGCGCCCCGACCGCAACTGTGGCGGCAGGATTGTGGTGCCG CTGCTCATGGGCCTGCCCAGCCTGATGCGCCTCCGCCAGTGCCTGACAGACTATGTTCGCGTGCGCCGCGCCCCT CGCAACGCGTCGACGGGCTGGGGCGGCCAGCACCTGGCCAATGCGCTCAAGTACTCGACGGCCTTTCCCGTCATC CTGTCGAGCTCCCTGCAGAGAAATCTCGAGAGCCCCGAGGCCAAGGCTGCCTGGTACCGCGCCTGGCTGGTGGCG GTTGTGGTCAACTCGCTCTACTCCTTCTACTGGGACGTGACCATGGACTGGAGTCTGACGCTGCTGGCCTCGAAG CGCCTGCGCAACGCGCCCCAGCACGCCTGGGGCCTCCGCCAGCCTCTGCTCTTCAGCCCCTTGTCCCTCTACTAC ACTGCCGTTGTGGTGGACCTGGCCCTGCGCTGCACCTGGTCCATGAAGCTCAGCCCTCACCTGGACAAGTTTAGC GACTTTGAGAGCGGCATCTTCCTCATTGAGTTCCTCGAGGTCTTTCGGCGCTGGCTGTGGATCTTTTTGCGCGTC GAGACGGAAAGCATCAAGAAGCACTGTGCCCTGGACCACGACAACGCCTTGGTGCTGCTGGGAGATTACCACGAC AGATATGAGGATGAGGCCTAG |
| Transcript | >OphauB2|270 ATGGACGGCGACGCAGCGGTTGAGCCTCAGCTCGACTCGTTCAGCCTGGCGTTTCCGCTGCCCTACCGGGTGGGC TTTATTGTCACTTTGGGCGTCTGGGGCTGGGGCCTCAACCTGCACTACCTCGGACTGGCCAAGATTGACGTTGCA GGCCTGATAGGATACGCGGGTCGCTCCTCGCAGCAGCAGGGCGGCGCTCAGGCATCGACTTACCGGCTGGCGAGT CTGCTGTCGGGCCTGCTGGGCGTGTCGCTGACGCTGTTTTGGCTGGCGACGTGGCGCGTCCCCCAGCGCGTCGTG GCGTACGACTGGCTGCCCGTGACATATCTGGCAGCCGTGGTGGCGACCATGTTGGTGCCTCTGCGCAGCCTGCCG AGCCGGGGACGACAATGCTTCCTGGCGACGCTGCGGCGCATCGGGCTGGGCGGCATAGCGGAAGCGCCCGAGGCG CGGTTCAGAGACATACTGTTGGCCGACGTGCTCACGTCGTACGCCAAGGTGTGCGGCGACGTCTTTGTTGCGCTG TGCATGTTTGTGAGGCCCGGCAGCTCGGCGACGCAGCGCCCCGACCGCAACTGTGGCGGCAGGATTGTGGTGCCG CTGCTCATGGGCCTGCCCAGCCTGATGCGCCTCCGCCAGTGCCTGACAGACTATGTTCGCGTGCGCCGCGCCCCT CGCAACGCGTCGACGGGCTGGGGCGGCCAGCACCTGGCCAATGCGCTCAAGTACTCGACGGCCTTTCCCGTCATC CTGTCGAGCTCCCTGCAGAGAAATCTCGAGAGCCCCGAGGCCAAGGCTGCCTGGTACCGCGCCTGGCTGGTGGCG GTTGTGGTCAACTCGCTCTACTCCTTCTACTGGGACGTGACCATGGACTGGAGTCTGACGCTGCTGGCCTCGAAG CGCCTGCGCAACGCGCCCCAGCACGCCTGGGGCCTCCGCCAGCCTCTGCTCTTCAGCCCCTTGTCCCTCTACTAC ACTGCCGTTGTGGTGGACCTGGCCCTGCGCTGCACCTGGTCCATGAAGCTCAGCCCTCACCTGGACAAGTTTAGC GACTTTGAGAGCGGCATCTTCCTCATTGAGTTCCTCGAGGTCTTTCGGCGCTGGCTGTGGATCTTTTTGCGCGTC GAGACGGAAAGCATCAAGAAGCACTGTGCCCTGGACCACGACAACGCCTTGGTGCTGCTGGGAGATTACCACGAC AGATATGAGGATGAGGCCTAG |
| Gene | >OphauB2|270 ATGGACGGCGACGCAGCGGTTGAGCCTCAGCTCGACTCGTTCAGCCTGGCGTTTCCGCTGCCCTACCGGGTGGGC TTTATTGTCACTTTGGGTTTGTGCAAAGAAGGAGAAGAGGAAGAAGAAGAGGAAGAGGAAGAAGCAAGGGCAGTA CTGACTTGTGCTCGATTCTAGGCGTCTGGGGCTGGGGCCTCAACCTGCACTACCTCGGACTGGCCAAGATTGACG TTGCAGGCCTGATAGGATACGCGGGTCGCTCCTCGCAGCAGCAGGGCGGCGCTCAGGCATCGACTTACCGGCTGG CGAGTCTGCTGTCGGGCCTGCTGGGCGTGTCGCTGACGCTGTTTTGGCTGGCGACGTGGCGCGTCCCCCAGCGCG TCGTGGCGTACGACTGGCTGCCCGTGACATATCTGGCAGCCGTGGTGGCGACCATGTTGGTGCCTCTGCGCAGCC TGCCGAGCCGGGGACGACAATGCTTCCTGGCGACGCTGCGGCGCATCGGGCTGGGCGGCATAGCGGAAGCGCCCG AGGCGCGGTTCAGAGACATACTGTTGGCCGACGTGCTCACGTCGTACGCCAAGGTGTGCGGCGACGTCTTTGTTG CGCTGTGCATGTTTGTGAGGCCCGGCAGCTCGGCGACGCAGCGCCCCGACCGCAACTGTGGCGGCAGGATTGTGG TGCCGCTGCTCATGGGCCTGCCCAGCCTGATGCGCCTCCGCCAGTGCCTGACAGACTATGTTCGCGTGCGCCGCG CCCCTCGCAACGCGTCGACGGGCTGGGGCGGCCAGCACCTGGCCAATGCGCTCAAGTACTCGACGGCCTTTCCCG TCATCCTGTCGAGCTCCCTGCAGAGAAATCTCGAGAGCCCCGAGGCCAAGGCTGCCTGGTACCGCGCCTGGCTGG TGGCGGTTGTGGTCAACTCGCTCTACTCCTTCTACTGGGACGTGACCATGGACTGGAGTCTGACGCTGCTGGCCT CGAAGCGCCTGCGCAACGCGCCCCAGCACGCCTGGGGCCTCCGCCAGCCTCTGCTCTTCAGCCCCTTGTCCCTCT ACTACACTGCCGTTGTGGTGGACCTGGCCCTGCGCTGCACCTGGTCCATGAAGCTCAGCCCTCACCTGGACAAGT TTAGCGACTTTGAGAGCGGCATCTTCCTCATTGAGTTCCTCGAGGTCTTTCGGCGCTGGCTGTGGATCTTTTTGC GCGTCGAGACGGAAAGCATCAAGAAGCACTGTGCCCTGGACCACGACAACGCCTTGGTGCTGCTGGGAGATTACC ACGACAGATATGAGGATGAGGCCTAG |