Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2664
Gene name
LocationContig_188:14651..15505
Strand-
Gene length (bp)854
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01965 DJ-1_PfpI DJ-1/PfpI family 2.5E-13 71 210

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1 69 213 8.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2664
MKSSFLLSTLMLPLASVAKTAQNIHIGVYMANDSQVLDTAAVDILGCMSKQFISTLPRGLPPNITWDQVPDVKVS
YITADEQGQDMIMSSDMVVRATHTIDDEEVAPGKLDMVVVPGPSRWNNLDKRGLDWVREQYTKGVDILSICTGIF
ICCDAGIASGKKATGPKPLQKLLKAKYPDVDFQGDKYRYLQDGNFWSSGSVTNGNDLLAAYARASSLWPQPIVEM
ILDLMDTGNRGQTFANVKF*
Coding >OphauB2|2664
ATGAAGTCTTCGTTCCTCCTTAGCACCCTTATGCTCCCTCTTGCCTCAGTGGCAAAGACGGCACAAAATATTCAC
ATTGGTGTCTACATGGCCAATGATTCGCAGGTGCTCGATACTGCCGCCGTCGACATCTTGGGATGCATGTCAAAG
CAATTTATTTCTACTCTTCCTCGCGGACTTCCTCCAAATATAACCTGGGATCAGGTTCCTGACGTCAAAGTTAGC
TACATCACCGCAGACGAGCAAGGCCAAGACATGATTATGTCGTCTGATATGGTGGTACGGGCAACACACACGATT
GACGATGAAGAAGTGGCTCCGGGGAAGCTCGACATGGTGGTGGTTCCAGGCCCGTCTCGTTGGAATAACCTGGAC
AAAAGGGGGTTGGACTGGGTGCGAGAGCAGTACACCAAGGGCGTCGACATCTTGTCCATTTGCACGGGAATTTTT
ATTTGCTGCGATGCGGGCATTGCAAGCGGCAAGAAAGCCACGGGTCCCAAGCCCCTTCAGAAGCTTCTCAAAGCC
AAGTATCCCGACGTTGATTTCCAGGGAGACAAGTACCGCTATCTCCAAGATGGCAACTTTTGGTCAAGTGGCAGC
GTCACCAATGGCAACGACTTGCTGGCAGCCTATGCCCGGGCCAGCAGCCTTTGGCCCCAGCCAATTGTCGAAATG
ATTCTCGATCTCATGGATACGGGTAACCGCGGCCAAACATTTGCCAATGTCAAGTTCTGA
Transcript >OphauB2|2664
ATGAAGTCTTCGTTCCTCCTTAGCACCCTTATGCTCCCTCTTGCCTCAGTGGCAAAGACGGCACAAAATATTCAC
ATTGGTGTCTACATGGCCAATGATTCGCAGGTGCTCGATACTGCCGCCGTCGACATCTTGGGATGCATGTCAAAG
CAATTTATTTCTACTCTTCCTCGCGGACTTCCTCCAAATATAACCTGGGATCAGGTTCCTGACGTCAAAGTTAGC
TACATCACCGCAGACGAGCAAGGCCAAGACATGATTATGTCGTCTGATATGGTGGTACGGGCAACACACACGATT
GACGATGAAGAAGTGGCTCCGGGGAAGCTCGACATGGTGGTGGTTCCAGGCCCGTCTCGTTGGAATAACCTGGAC
AAAAGGGGGTTGGACTGGGTGCGAGAGCAGTACACCAAGGGCGTCGACATCTTGTCCATTTGCACGGGAATTTTT
ATTTGCTGCGATGCGGGCATTGCAAGCGGCAAGAAAGCCACGGGTCCCAAGCCCCTTCAGAAGCTTCTCAAAGCC
AAGTATCCCGACGTTGATTTCCAGGGAGACAAGTACCGCTATCTCCAAGATGGCAACTTTTGGTCAAGTGGCAGC
GTCACCAATGGCAACGACTTGCTGGCAGCCTATGCCCGGGCCAGCAGCCTTTGGCCCCAGCCAATTGTCGAAATG
ATTCTCGATCTCATGGATACGGGTAACCGCGGCCAAACATTTGCCAATGTCAAGTTCTGA
Gene >OphauB2|2664
ATGAAGTCTTCGTTCCTCCTTAGCACCCTTATGCTCCCTCTTGCCTCAGTGGCAAAGACGGCACAAAATATTCAC
ATTGGTGTCTACATGGCCAATGATTCGCAGGTGCTCGATACTGCCGCCGTCGACATCTTGGGATGCATGTCAAAG
CAATTTATTTCTACTCTTCCTCGCGGACTTCCTCCAAATATAACCTGGGATCAGGTTCCTGACGTCAAAGTTAGC
TACATCACCGCAGACGAGCAAGGCCAAGACATGATTATGTCGTCTGATATGGTGGTACGGGCAACACACACGATT
GACGATGAAGAAGTGGCTCCGGGGAAGCTCGACATGGTGGTGGTTCCAGGCCCGTCTCGTTGGAATAACCTGGAC
AAAAGGGGGTTGGACTGGGTGCGAGAGCAGTACACCAAGGGCGTCGACATCTTGTCCATTTGCACGGGAATTTTT
ATTTGCTGCGATGCGGGCATTGCAAGCGGCAAGAAAGCCACGGGTCCCAAGCCCCTTCAGAAGCTTCTCAAAGCC
AAGTATCCCGACGTTGATTTCCAGGGAGACAAGTACCGCTATCTCCAAGATGGCAACTTTTGGTCAAGTGGTGCG
TTGTCTCGGCTTTGAGTTGAAGCTCTGCGCAGTTTCTGACTGTTGATTATAGGCAGCGTCACCAATGGCAACGAC
TTGCTGGCAGCCTATGCCCGGGCCAGCAGCCTTTGGCCCCAGCCAATTGTCGAAATGATTCTCGATCTCATGGAT
ACGGGTAACCGCGGCCAAACATTTGCCAATGTCAAGTGTGAGTCGAGCCGTCGTGCTGTGCTGAGAGAACAAGAC
ATGCTTACAAGCTCTGTTGACTAGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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