Protein ID | OphauB2|2615 |
Gene name | |
Location | Contig_184:17756..19828 |
Strand | + |
Gene length (bp) | 2072 |
Transcript length (bp) | 1878 |
Coding sequence length (bp) | 1878 |
Protein length (aa) | 626 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13369 | Transglut_core2 | Transglutaminase-like superfamily | 1.5E-18 | 196 | 367 |
PF08755 | YccV-like | Hemimethylated DNA-binding protein YccV like | 1.1E-12 | 503 | 610 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q8VDH1|FBX21_MOUSE | F-box only protein 21 OS=Mus musculus GN=Fbxo21 PE=1 SV=1 | 247 | 525 | 1.0E-07 |
sp|O94952|FBX21_HUMAN | F-box only protein 21 OS=Homo sapiens GN=FBXO21 PE=2 SV=2 | 124 | 525 | 2.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003677 | DNA binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0003676 | nucleic acid binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|2615 MSFNRVPDEIIQHLFYHVSPADNLDSLQLLSRRLHRLATEPLLWRYHCRNSFRYWNPSHCFDQRLRLRALDVEWQ QLYIKRMHCNKRIATLLREIIASKVGRLKRFEEIARLGYDAKDYLISQCRVDESAHDYLARRYYSNALLDAIHRS IAIDEWHQLWLQRDSLQAQVAGVRLERALGAFDMFVLHDDFGDVADISHMLDERIAEFRASLPNLCDLSTRQKAL ALNRWLRANGLTGICNQEGAHYRNLRNLFIGQALRHDNHDSLPVISSAIFCCLAARLGLTAQCCAFPGHVHAIVS AAPGLTLDGAPADEHGEPPQRMYLDPFGFDHEVPAAGFHALLAHLGWHTSADALLAPVSTLAIVLRTAHNIKATF LEFLALQDTAPSQLNQLLSGNNSMNMEAALYSSMWAPLMLTPPNTFEWDDHLASFLRRFAGSWPEDVWLVEKYLK PMYSHVAPVGDGFAHHHANRGLGDPWEHWRLVRNQDGMKPPVFRRSSSANQPVPFKIGQVFRHRRYGWIGVITGW SDKGTRHLPVPHATDLDEAIDTHATELPSILVQPPNQFYFMCFPSTGSEPHVVAAHNIELIQDATQINDDMFPLA GKFFKRFDRSTCTFVSNIKEQYPDD* |
Coding | >OphauB2|2615 ATGTCTTTCAACCGGGTGCCGGATGAGATTATCCAGCACCTGTTCTACCATGTCTCCCCGGCAGACAATCTCGAC AGCCTGCAGCTTCTCTCTCGCCGTCTTCACCGTCTCGCCACGGAGCCGCTGCTCTGGCGCTACCACTGCCGCAAC TCGTTCCGATACTGGAACCCCAGCCACTGCTTTGACCAGCGTCTGCGCCTCAGGGCCCTCGACGTTGAATGGCAA CAACTCTACATCAAGAGAATGCACTGCAACAAGCGCATCGCCACGCTGCTCAGGGAAATCATTGCATCCAAAGTC GGCCGCCTGAAGCGCTTTGAAGAAATTGCCCGCCTGGGCTACGATGCCAAGGACTATCTCATTTCGCAGTGCCGC GTAGACGAGTCGGCCCATGACTATCTCGCCCGCAGGTACTACAGTAATGCCTTGCTCGATGCCATACATCGCAGC ATAGCCATTGACGAGTGGCACCAATTGTGGCTCCAGCGCGACTCTCTCCAAGCCCAAGTTGCTGGTGTTCGCCTC GAACGGGCATTGGGCGCCTTTGACATGTTTGTCTTGCATGACGACTTTGGTGATGTTGCTGATATTTCTCACATG CTGGATGAGAGAATAGCCGAATTCCGTGCCAGCCTCCCCAACCTCTGCGACCTCAGTACCCGCCAAAAGGCGCTC GCTCTGAATCGATGGCTTCGTGCCAACGGCCTCACGGGCATTTGCAACCAAGAGGGCGCCCATTACCGCAATTTA CGCAACCTCTTTATTGGTCAGGCCCTTCGACACGACAACCACGACTCCCTCCCAGTCATTTCAAGCGCCATTTTT TGCTGCCTGGCTGCTCGCTTGGGCCTTACTGCCCAGTGCTGCGCCTTTCCCGGCCATGTCCATGCCATTGTTTCC GCTGCTCCAGGCCTTACTCTCGACGGAGCACCCGCCGACGAGCATGGTGAGCCCCCTCAACGCATGTATCTCGAC CCCTTTGGCTTCGACCACGAGGTGCCGGCTGCCGGCTTCCATGCTCTATTGGCACATCTAGGGTGGCACACTAGC GCCGATGCCCTTCTTGCCCCCGTCTCCACCTTGGCCATTGTACTGAGAACAGCGCACAATATCAAAGCAACCTTT CTCGAATTCCTCGCGCTGCAGGACACTGCCCCCAGCCAGCTCAATCAGCTCCTAAGCGGAAACAACTCGATGAAC ATGGAGGCTGCTCTTTACTCGTCCATGTGGGCGCCTCTGATGCTCACACCGCCCAACACTTTTGAATGGGACGAC CATTTGGCCAGTTTTCTACGTCGCTTTGCTGGTTCCTGGCCCGAGGATGTATGGCTGGTTGAAAAGTATCTCAAG CCCATGTATAGTCATGTGGCGCCAGTCGGAGACGGCTTTGCTCACCATCATGCCAATCGCGGACTCGGAGATCCA TGGGAGCACTGGCGCCTCGTACGAAATCAAGATGGCATGAAGCCGCCCGTCTTCCGCAGAAGTTCTTCGGCCAAT CAGCCTGTGCCATTCAAGATTGGCCAAGTGTTCCGCCATCGCCGATATGGCTGGATTGGGGTCATTACTGGCTGG TCTGACAAGGGCACCAGGCACCTTCCCGTTCCGCACGCGACAGATTTGGATGAAGCCATCGACACTCACGCCACA GAGCTACCGTCGATATTAGTTCAGCCACCAAACCAATTCTACTTTATGTGCTTTCCCAGCACTGGCTCGGAACCG CACGTTGTGGCAGCCCACAATATTGAGCTAATCCAAGATGCCACCCAAATCAATGACGACATGTTTCCATTGGCG GGCAAGTTTTTCAAAAGATTTGATCGCTCGACTTGTACTTTTGTCTCCAACATCAAGGAGCAGTATCCTGATGAC TGA |
Transcript | >OphauB2|2615 ATGTCTTTCAACCGGGTGCCGGATGAGATTATCCAGCACCTGTTCTACCATGTCTCCCCGGCAGACAATCTCGAC AGCCTGCAGCTTCTCTCTCGCCGTCTTCACCGTCTCGCCACGGAGCCGCTGCTCTGGCGCTACCACTGCCGCAAC TCGTTCCGATACTGGAACCCCAGCCACTGCTTTGACCAGCGTCTGCGCCTCAGGGCCCTCGACGTTGAATGGCAA CAACTCTACATCAAGAGAATGCACTGCAACAAGCGCATCGCCACGCTGCTCAGGGAAATCATTGCATCCAAAGTC GGCCGCCTGAAGCGCTTTGAAGAAATTGCCCGCCTGGGCTACGATGCCAAGGACTATCTCATTTCGCAGTGCCGC GTAGACGAGTCGGCCCATGACTATCTCGCCCGCAGGTACTACAGTAATGCCTTGCTCGATGCCATACATCGCAGC ATAGCCATTGACGAGTGGCACCAATTGTGGCTCCAGCGCGACTCTCTCCAAGCCCAAGTTGCTGGTGTTCGCCTC GAACGGGCATTGGGCGCCTTTGACATGTTTGTCTTGCATGACGACTTTGGTGATGTTGCTGATATTTCTCACATG CTGGATGAGAGAATAGCCGAATTCCGTGCCAGCCTCCCCAACCTCTGCGACCTCAGTACCCGCCAAAAGGCGCTC GCTCTGAATCGATGGCTTCGTGCCAACGGCCTCACGGGCATTTGCAACCAAGAGGGCGCCCATTACCGCAATTTA CGCAACCTCTTTATTGGTCAGGCCCTTCGACACGACAACCACGACTCCCTCCCAGTCATTTCAAGCGCCATTTTT TGCTGCCTGGCTGCTCGCTTGGGCCTTACTGCCCAGTGCTGCGCCTTTCCCGGCCATGTCCATGCCATTGTTTCC GCTGCTCCAGGCCTTACTCTCGACGGAGCACCCGCCGACGAGCATGGTGAGCCCCCTCAACGCATGTATCTCGAC CCCTTTGGCTTCGACCACGAGGTGCCGGCTGCCGGCTTCCATGCTCTATTGGCACATCTAGGGTGGCACACTAGC GCCGATGCCCTTCTTGCCCCCGTCTCCACCTTGGCCATTGTACTGAGAACAGCGCACAATATCAAAGCAACCTTT CTCGAATTCCTCGCGCTGCAGGACACTGCCCCCAGCCAGCTCAATCAGCTCCTAAGCGGAAACAACTCGATGAAC ATGGAGGCTGCTCTTTACTCGTCCATGTGGGCGCCTCTGATGCTCACACCGCCCAACACTTTTGAATGGGACGAC CATTTGGCCAGTTTTCTACGTCGCTTTGCTGGTTCCTGGCCCGAGGATGTATGGCTGGTTGAAAAGTATCTCAAG CCCATGTATAGTCATGTGGCGCCAGTCGGAGACGGCTTTGCTCACCATCATGCCAATCGCGGACTCGGAGATCCA TGGGAGCACTGGCGCCTCGTACGAAATCAAGATGGCATGAAGCCGCCCGTCTTCCGCAGAAGTTCTTCGGCCAAT CAGCCTGTGCCATTCAAGATTGGCCAAGTGTTCCGCCATCGCCGATATGGCTGGATTGGGGTCATTACTGGCTGG TCTGACAAGGGCACCAGGCACCTTCCCGTTCCGCACGCGACAGATTTGGATGAAGCCATCGACACTCACGCCACA GAGCTACCGTCGATATTAGTTCAGCCACCAAACCAATTCTACTTTATGTGCTTTCCCAGCACTGGCTCGGAACCG CACGTTGTGGCAGCCCACAATATTGAGCTAATCCAAGATGCCACCCAAATCAATGACGACATGTTTCCATTGGCG GGCAAGTTTTTCAAAAGATTTGATCGCTCGACTTGTACTTTTGTCTCCAACATCAAGGAGCAGTATCCTGATGAC TGA |
Gene | >OphauB2|2615 ATGTCTTTCAACCGGGTGCCGGATGAGATTATCCAGCACCTGTTCTACCATGTCTCCCCGGCAGACAATCTCGAC AGCCTGCAGCTTCTCTCTCGCCGTCTTCACCGTCTCGCCACGGAGCCGCTGCTCTGGCGCTACCACTGCCGCAAC TCGTTCCGATACTGGAACCCCAGCCACTGCTTTGACCAGCGTCTGCGCCTCAGGGCCCTCGACGTTGAATGGCAA CAACTCTACATCAAGAGAATGCACTGCAACAAGCGCATCGCCACGCTGCTCAGGGAAATCATTGCATCCAAAGTC GGCCGCCTGAAGCGCTTTGAAGAAATTGCCCGCCTGGGCTACGATGCCAAGGACTATCTCATTTCGCAGTGCCGC GTAGACGAGTCGGCCCATGACTATCTCGCCCGCAGGTGCGCTCCTTGGCCCATGATGACACGCCCGCCGCCACCC TGACTATTGCTCCCAGGTACTACAGTAATGCCTTGCTCGATGCCATACATCGCAGCATAGCCATTGACGAGTGGC ACCAATTGTGGCTCCAGCGCGACTCTCTCCAAGCCCAAGTTGCTGGTGTTCGCCTCGAACGGGCATTGGGCGCCT TTGACATGTTTGTCTTGCATGACGACTTTGGTGATGTTGCTGATGTGCGCCATGATGCCTTCTCCCGGCCTACTT GTCTTTTACCACGGCTGATTCTTCTCGGCCCCTTCAGATTTCTCACATGCTGGATGAGAGAATAGCCGAATTCCG TGCCAGCCTCCCCAACCTCTGCGACCTCAGTACCCGCCAAAAGGCGCTCGCTCTGAATCGATGGCTTCGTGCCAA CGGCCTCACGGGCATTTGCAACCAAGAGGGCGCCCATTACCGCAATTTACGCAACCTCTTTATTGGTCAGGCCCT TCGACACGACAACCACGACTCCCTCCCAGTCATTTCAAGCGCCATTTTTTGCTGCCTGGCTGCTCGCTTGGGCCT TACTGCCCAGTGCTGCGCCTTTCCCGGCCATGTCCATGCCATTGTTTCCGCTGCTCCAGGCCTTACTCTCGACGG AGCACCCGCCGACGAGCATGGTGAGCCCCCTCAACGCATGTATCTCGACCCCTTTGGCTTCGACCACGAGGTGCC GGCTGCCGGCTTCCATGCTCTATTGGCACATCTAGGGTGGCACACTAGCGCCGATGCCCTTCTTGCCCCCGTCTC CACCTTGGCCATTGTACTGAGAACAGCGCACAATATCAAAGCAACCTTTCTCGAATTCCTCGCGCTGCAGGACAC TGCCCCCAGCCAGCTCAATCAGCTCCTAAGCGGAAACAACTCGATGAACATGGAGGCTGCTCTTTACTCGTCCAT GTGGGCGCCTCTGATGCTCACACCGCCCAACACTTTTGAATGGGACGACCATTTGGCCAGTTTTCTACGTCGCTT TGCTGGTTCCTGGCCCGAGGATGTATGGCTGGTTGAAAAGTATCTCAAGCCCATGTATAGTCATGTGGCGCCAGT CGGAGACGGCTTTGCTCACCATCATGCCAATCGCGGACTCGGAGATCCATGGGAGCACTGGCGCCTCGTACGAAA TCAAGATGGCATGAAGCCGCCCGTCTTCCGCAGAAGTTCTTCGGCCAATCAGCCTGTGCCATTCAAGATTGGCCA AGTGTTCCGCCATCGCCGATATGGCTGGATTGGGGTCATTACTGGCTGGTCTGACAAGGGCACCAGGCACCTTCC CGTTCCGCACGCGACAGATTTGGATGAAGCCATCGACACTCACGCCACAGAGCTACCGTCGATATTAGTTCAGCC ACCAAACCAATTCTACTTTATGTGCTTGTAAGTACCATTGCCACACCACACTGACTGTGGCGCAGTCAAACGCGC TTGGCTAATGAGACGCTTCTAGTCCCAGCACTGGCTCGGAACCGCACGTTGTGGCAGCCCACAATATTGAGCTAA TCCAAGATGCCACCCAAATCAATGACGACATGTTTCCATTGGCGGGCAAGTTTTTCAAAAGATTTGATCGCTCGA CTTGTACTTTTGTCTCCAACATCAAGGAGCAGTATCCTGATGACTGA |