© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2592 |
| Gene name | |
| Location | Contig_182:37761..39678 |
| Strand | + |
| Gene length (bp) | 1917 |
| Transcript length (bp) | 1713 |
| Coding sequence length (bp) | 1713 |
| Protein length (aa) | 571 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.7E-25 | 50 | 451 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.1E-06 | 82 | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q04301|VBA1_YEAST | Vacuolar basic amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA1 PE=1 SV=1 | 48 | 361 | 5.0E-24 |
| sp|Q00357|TOXA_COCCA | Putative HC-toxin efflux carrier TOXA OS=Cochliobolus carbonum GN=TOXA PE=3 SV=1 | 55 | 361 | 1.0E-19 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 3 | 523 | 1.0E-16 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 3 | 343 | 4.0E-16 |
| sp|B5BP47|YP53_SCHPO | Uncharacterized transporter C460.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.03 PE=3 SV=1 | 1 | 549 | 1.0E-14 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q04301|VBA1_YEAST | Vacuolar basic amino acid transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA1 PE=1 SV=1 | 48 | 361 | 5.0E-24 |
| sp|Q00357|TOXA_COCCA | Putative HC-toxin efflux carrier TOXA OS=Cochliobolus carbonum GN=TOXA PE=3 SV=1 | 55 | 361 | 1.0E-19 |
| sp|Q10072|YAN6_SCHPO | Uncharacterized transporter C3H1.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.06c PE=3 SV=1 | 3 | 523 | 1.0E-16 |
| sp|Q9HE13|YI32_SCHPO | Uncharacterized MFS-type transporter C1399.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1399.02 PE=3 SV=1 | 3 | 343 | 4.0E-16 |
| sp|B5BP47|YP53_SCHPO | Uncharacterized transporter C460.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.03 PE=3 SV=1 | 1 | 549 | 1.0E-14 |
| sp|Q09752|FNX1_SCHPO | Multidrug resistance protein fnx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx1 PE=2 SV=2 | 49 | 454 | 3.0E-14 |
| sp|P96712|BMR3_BACSU | Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168) GN=bmr3 PE=1 SV=1 | 56 | 477 | 7.0E-14 |
| sp|P36172|VBA5_YEAST | Vacuolar basic amino acid transporter 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA5 PE=3 SV=1 | 27 | 265 | 3.0E-11 |
| sp|O59726|FNX2_SCHPO | Vacuolar membrane amino acid uptake transporter fnx2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fnx2 PE=3 SV=1 | 83 | 348 | 1.0E-10 |
| sp|P9WG89|EMRB_MYCTU | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=emrB PE=3 SV=1 | 83 | 367 | 1.0E-10 |
| sp|P9WG88|EMRB_MYCTO | Multidrug resistance protein B homolog OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=emrB PE=3 SV=1 | 83 | 367 | 1.0E-10 |
| sp|P54585|YHCA_BACSU | Uncharacterized MFS-type transporter YhcA OS=Bacillus subtilis (strain 168) GN=yhcA PE=3 SV=2 | 82 | 348 | 2.0E-10 |
| sp|Q08902|YO378_YEAST | Drug resistance protein YOR378W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOR378W PE=1 SV=1 | 83 | 385 | 5.0E-08 |
| sp|P33335|SGE1_YEAST | Protein SGE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGE1 PE=1 SV=1 | 83 | 252 | 2.0E-07 |
| sp|O32182|YUSP_BACSU | Uncharacterized MFS-type transporter YusP OS=Bacillus subtilis (strain 168) GN=yusP PE=3 SV=1 | 83 | 348 | 2.0E-07 |
| sp|Q9P6J7|YHD3_SCHPO | Uncharacterized MFS-type transporter C1683.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.03c PE=3 SV=1 | 78 | 384 | 3.0E-07 |
| sp|P94422|YCNB_BACSU | Uncharacterized MFS-type transporter YcnB OS=Bacillus subtilis (strain 168) GN=ycnB PE=3 SV=1 | 79 | 348 | 3.0E-07 |
| sp|O42922|YBIH_SCHPO | Uncharacterized MFS-type transporter C16A3.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16A3.17c PE=3 SV=1 | 6 | 567 | 5.0E-07 |
| sp|P50080|AZR1_YEAST | Azole resistance protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AZR1 PE=1 SV=1 | 70 | 207 | 7.0E-07 |
| sp|O35018|LMRB_BACSU | Lincomycin resistance protein LmrB OS=Bacillus subtilis (strain 168) GN=lmrB PE=3 SV=1 | 82 | 227 | 2.0E-06 |
| sp|P9WG87|Y1250_MYCTU | Uncharacterized MFS-type transporter Rv1250 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1250 PE=3 SV=1 | 83 | 360 | 2.0E-06 |
| sp|P9WG86|Y1250_MYCTO | Uncharacterized MFS-type transporter MT1289 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1289 PE=3 SV=1 | 83 | 360 | 2.0E-06 |
| sp|P38358|VBA2_YEAST | Vacuolar basic amino acid transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VBA2 PE=1 SV=1 | 81 | 520 | 2.0E-06 |
| sp|P9WG85|Y1877_MYCTU | Uncharacterized MFS-type transporter Rv1877 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1877 PE=3 SV=1 | 36 | 468 | 3.0E-06 |
| sp|P9WG84|Y1877_MYCTO | Uncharacterized MFS-type transporter MT1926 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1926 PE=3 SV=1 | 36 | 468 | 3.0E-06 |
| sp|P52600|EMRY_ECOLI | Probable multidrug resistance protein EmrY OS=Escherichia coli (strain K12) GN=emrY PE=2 SV=1 | 43 | 454 | 3.0E-06 |
| sp|O31563|YFIU_BACSU | Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis (strain 168) GN=yfiU PE=3 SV=1 | 77 | 367 | 7.0E-06 |
| sp|Q92EE1|LMRB_LISIN | Lincomycin resistance protein LmrB OS=Listeria innocua serovar 6a (strain CLIP 11262) GN=lmrB PE=3 SV=1 | 82 | 361 | 8.0E-06 |
| sp|Q8Y9K8|LMRB_LISMO | Lincomycin resistance protein LmrB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=lmrB PE=3 SV=1 | 82 | 361 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 38 | 56 | 18 |
| 2 | 83 | 105 | 22 |
| 3 | 110 | 128 | 18 |
| 4 | 135 | 157 | 22 |
| 5 | 172 | 194 | 22 |
| 6 | 201 | 223 | 22 |
| 7 | 243 | 265 | 22 |
| 8 | 270 | 292 | 22 |
| 9 | 312 | 334 | 22 |
| 10 | 341 | 360 | 19 |
| 11 | 370 | 392 | 22 |
| 12 | 399 | 421 | 22 |
| 13 | 441 | 463 | 22 |
| 14 | 521 | 543 | 22 |
| Gene cluster ID | Type of secondary metabolism gene |
|---|---|
| Cluster 15 | Decorating |
| Orthofinder run ID | 4 |
| Orthogroup | 6361 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2592 MQSHSHQTATEHSRLLPSRDAPHDAAAHGSDQESPPLLAPWRAVAVGLSLWLLIFLEATNMSGMAIIQGPVAHAL DAPRRARWFTTSYLIATSSLAPLVGRLATIFSPRALAPLVAMLFALGSLVASQATNADVFILGRVLAGAAGGGVL SLSVVFVVALSKPHTRGVCFGMATAGITAGVSFGAVVYGGLLPIIGWRPLFWIQAPIAMVLGLAIYQSAPMAMTA PRSALTPHVSASVLKRLSQIDYLGALLLTLTIVLFLYGLAGDIQLMYIAISLVSLAAFISVEYLVAADPVIPLSV LSSRGVLLTCLGQLGLMSARWSLLFYAPVFMLAVRGAAPAAAGSVLIPTNLGFVVGGVLAGSLHIRRPGSFWLPT LVVFAAAAMSYLCLSLVASPSVALSALVVIVFFNGAATGAALNYSLAHLLHLSYPGTHYVTSSLHSTFRGLGSSF GTSIGGGIFFRLLRTNLGRGFQVLDGSQDLSQSRKDLIVRLLAVPDAVFHGGLNLDERQVAITGYSFAIKGVWKA AGVLVIVMVAVQALTGWTSPSAKSLSNGQEGAVQDSDETRGQGEE* |
| Coding | >OphauB2|2592 ATGCAGTCTCATTCGCATCAGACAGCCACTGAACACTCTCGGCTGCTTCCATCTCGCGACGCGCCTCACGATGCA GCTGCACATGGCTCGGACCAGGAGTCGCCTCCGCTTCTTGCTCCCTGGCGCGCTGTAGCTGTCGGGCTCTCGCTA TGGCTGCTCATCTTTCTCGAGGCTACAAACATGTCTGGCATGGCCATTATTCAAGGCCCCGTTGCCCACGCCCTC GATGCTCCACGACGCGCTCGCTGGTTCACCACGTCATACCTCATTGCCACGTCGTCTCTGGCGCCTCTTGTCGGC CGCTTGGCCACCATCTTTAGCCCTCGCGCCCTTGCTCCTCTGGTAGCCATGCTCTTCGCCCTTGGAAGCCTCGTT GCTTCGCAAGCCACCAACGCCGACGTCTTCATTCTTGGCCGAGTCTTGGCCGGTGCTGCAGGTGGCGGCGTGCTC TCTCTATCCGTGGTATTTGTCGTTGCTCTTTCCAAGCCCCACACCCGTGGTGTCTGTTTCGGCATGGCTACCGCC GGAATCACGGCCGGTGTCTCATTTGGAGCTGTGGTCTATGGTGGCTTGCTGCCCATCATTGGATGGCGACCCCTG TTTTGGATCCAAGCACCTATTGCCATGGTTCTCGGTCTCGCCATCTATCAAAGTGCGCCCATGGCAATGACTGCC CCCAGGTCGGCCTTGACGCCTCATGTGTCTGCCTCTGTCTTGAAGAGGTTGTCGCAAATCGATTATCTCGGCGCC CTTCTTCTTACCCTTACAATTGTTCTCTTTCTTTACGGCCTCGCAGGTGATATTCAGCTCATGTACATTGCCATT TCGCTCGTCTCTCTGGCCGCCTTTATCTCGGTCGAGTATCTCGTGGCTGCCGATCCAGTCATTCCCCTCTCAGTG CTTTCCTCTCGTGGCGTTCTACTCACCTGTCTTGGTCAGCTCGGTCTCATGTCAGCCCGCTGGAGTCTTCTCTTT TATGCACCCGTCTTCATGCTCGCCGTCCGTGGCGCTGCCCCAGCCGCTGCTGGCTCCGTCTTGATTCCCACAAAT CTCGGTTTTGTTGTCGGCGGCGTACTCGCTGGCTCGCTACATATTCGCCGGCCCGGCTCCTTTTGGCTCCCCACT CTTGTCGTCTTTGCCGCTGCTGCAATGTCGTATCTCTGCCTTTCCCTCGTGGCCTCGCCCTCGGTGGCCCTTTCC GCCCTGGTTGTCATTGTCTTTTTCAATGGAGCTGCAACGGGTGCCGCTCTAAACTATAGCCTTGCCCATCTCCTT CACCTGAGCTATCCTGGCACCCACTACGTCACGAGCAGCCTGCACTCCACCTTTCGAGGCCTTGGTAGTAGCTTT GGCACCTCTATTGGCGGCGGCATATTTTTTCGCCTGTTGCGCACAAACCTTGGTCGCGGCTTCCAAGTCTTGGAT GGCTCTCAAGACTTGTCGCAATCACGCAAAGACCTCATTGTTCGCCTGCTTGCTGTTCCCGATGCCGTCTTTCAT GGCGGTCTAAACCTAGACGAGCGACAAGTCGCCATTACTGGTTACAGTTTTGCCATCAAGGGGGTGTGGAAGGCT GCTGGCGTGCTTGTCATTGTCATGGTTGCCGTCCAGGCCTTGACGGGCTGGACAAGCCCAAGCGCAAAGTCTCTG TCTAATGGCCAAGAAGGAGCAGTGCAAGACTCTGATGAGACAAGAGGCCAAGGGGAAGAGTAA |
| Transcript | >OphauB2|2592 ATGCAGTCTCATTCGCATCAGACAGCCACTGAACACTCTCGGCTGCTTCCATCTCGCGACGCGCCTCACGATGCA GCTGCACATGGCTCGGACCAGGAGTCGCCTCCGCTTCTTGCTCCCTGGCGCGCTGTAGCTGTCGGGCTCTCGCTA TGGCTGCTCATCTTTCTCGAGGCTACAAACATGTCTGGCATGGCCATTATTCAAGGCCCCGTTGCCCACGCCCTC GATGCTCCACGACGCGCTCGCTGGTTCACCACGTCATACCTCATTGCCACGTCGTCTCTGGCGCCTCTTGTCGGC CGCTTGGCCACCATCTTTAGCCCTCGCGCCCTTGCTCCTCTGGTAGCCATGCTCTTCGCCCTTGGAAGCCTCGTT GCTTCGCAAGCCACCAACGCCGACGTCTTCATTCTTGGCCGAGTCTTGGCCGGTGCTGCAGGTGGCGGCGTGCTC TCTCTATCCGTGGTATTTGTCGTTGCTCTTTCCAAGCCCCACACCCGTGGTGTCTGTTTCGGCATGGCTACCGCC GGAATCACGGCCGGTGTCTCATTTGGAGCTGTGGTCTATGGTGGCTTGCTGCCCATCATTGGATGGCGACCCCTG TTTTGGATCCAAGCACCTATTGCCATGGTTCTCGGTCTCGCCATCTATCAAAGTGCGCCCATGGCAATGACTGCC CCCAGGTCGGCCTTGACGCCTCATGTGTCTGCCTCTGTCTTGAAGAGGTTGTCGCAAATCGATTATCTCGGCGCC CTTCTTCTTACCCTTACAATTGTTCTCTTTCTTTACGGCCTCGCAGGTGATATTCAGCTCATGTACATTGCCATT TCGCTCGTCTCTCTGGCCGCCTTTATCTCGGTCGAGTATCTCGTGGCTGCCGATCCAGTCATTCCCCTCTCAGTG CTTTCCTCTCGTGGCGTTCTACTCACCTGTCTTGGTCAGCTCGGTCTCATGTCAGCCCGCTGGAGTCTTCTCTTT TATGCACCCGTCTTCATGCTCGCCGTCCGTGGCGCTGCCCCAGCCGCTGCTGGCTCCGTCTTGATTCCCACAAAT CTCGGTTTTGTTGTCGGCGGCGTACTCGCTGGCTCGCTACATATTCGCCGGCCCGGCTCCTTTTGGCTCCCCACT CTTGTCGTCTTTGCCGCTGCTGCAATGTCGTATCTCTGCCTTTCCCTCGTGGCCTCGCCCTCGGTGGCCCTTTCC GCCCTGGTTGTCATTGTCTTTTTCAATGGAGCTGCAACGGGTGCCGCTCTAAACTATAGCCTTGCCCATCTCCTT CACCTGAGCTATCCTGGCACCCACTACGTCACGAGCAGCCTGCACTCCACCTTTCGAGGCCTTGGTAGTAGCTTT GGCACCTCTATTGGCGGCGGCATATTTTTTCGCCTGTTGCGCACAAACCTTGGTCGCGGCTTCCAAGTCTTGGAT GGCTCTCAAGACTTGTCGCAATCACGCAAAGACCTCATTGTTCGCCTGCTTGCTGTTCCCGATGCCGTCTTTCAT GGCGGTCTAAACCTAGACGAGCGACAAGTCGCCATTACTGGTTACAGTTTTGCCATCAAGGGGGTGTGGAAGGCT GCTGGCGTGCTTGTCATTGTCATGGTTGCCGTCCAGGCCTTGACGGGCTGGACAAGCCCAAGCGCAAAGTCTCTG TCTAATGGCCAAGAAGGAGCAGTGCAAGACTCTGATGAGACAAGAGGCCAAGGGGAAGAGTAA |
| Gene | >OphauB2|2592 ATGCAGTCTCATTCGCATCAGACAGCCACTGAACACTCTCGGCTGCTTCCATCTCGCGACGCGCCTCACGATGCA GCTGCACATGGCTCGGACCAGGAGTCGCCTCCGCTTCTTGCTCCCTGGCGCGCTGTAGCTGTCGGGCTCTCGCTA TGGCTGCTCATCTTTCTCGAGGGTACTCTTCTTCTCCTCCCCTTGTCCCTTTTCTCTTTGCGCTGTTGAGCAGTC GTGGAGCTTCGGCCTTGGGAGCTAACTGGTAAGCTACAAACATGTCTGGCATGGCCATTATTCAAGGCCCCGTTG CCCACGCCCTCGATGCTCCACGACGCGCTCGCTGGTTCACCACGTCATACCTCATTGCCACGTCGTCTCTGGCGC CTCTTGTCGGCCGCTTGGCCACCATCTTTAGCCCTCGCGCCCTTGCTCCTCTGGTAGCCATGCTCTTCGCCCTTG GAAGCCTCGTTGCTTCGCAAGCCACCAACGCCGACGTCTTCATTCTTGGCCGAGTCTTGGCCGGTGCTGCAGGTG GCGGCGTGCTCTCTCTATCCGTGGTATTTGTCGTTGCTCTTTCCAAGCCCCACACCCGTGGTGTCTGTTTCGGCA TGGCTACCGCCGGAATCACGGCCGGTGTCTCATTTGGAGCTGTGGTCTATGGTGGCTTGCTGCCCATCATTGGAT GGGTTCGTGATGCCTTTTTTTTTCTTCTTCTCACCATGCCATGATTGACTAATTCTCATCTGTCTAGCGACCCCT GTTTTGGATCCAAGCACCTATTGCCATGGTTCTCGGTCTCGCCATCTATCAAAGTGCGCCCATGGCAATGACTGC CCCCAGGTCGGCCTTGACGCCTCATGTGTCTGCCTCTGTCTTGAAGAGGTTGTCGCAAATCGATTATCTCGGCGC CCTTCTTCTTGTACGTCATTCGACACCTTGCTCATGACACCTCTTGACTTTTGGCAATGACAGACCCTTACAATT GTTCTCTTTCTTTACGGCCTCGCAGGTGATATTCAGCTCATGTACATTGCCATTTCGCTCGTCTCTCTGGCCGCC TTTATCTCGGTCGAGTATCTCGTGGCTGCCGATCCAGTCATTCCCCTCTCAGTGCTTTCCTCTCGTGGCGTTCTA CTCACCTGTCTTGGTCAGCTCGGTCTCATGTCAGCCCGCTGGAGTCTTCTCTTTTATGCACCCGTCTTCATGCTC GCCGTCCGTGGCGCTGCCCCAGCCGCTGCTGGCTCCGTCTTGATTCCCACAAATCTCGGTTTTGTTGTCGGCGGC GTACTCGCTGGCTCGCTACATATTCGCCGGCCCGGCTCCTTTTGGCTCCCCACTCTTGTCGTCTTTGCCGCTGCT GCAATGTCGTATCTCTGCCTTTCCCTCGTGGCCTCGCCCTCGGTGGCCCTTTCCGCCCTGGTTGTCATTGTCTTT TTCAATGGAGCTGCAACGGGTGCCGCTCTAAACTATAGCCTTGCCCATCTCCTTCACCTGAGCTATCCTGGCACC CACTACGTCACGAGCAGCCTGCACTCCACCTTTCGAGGCCTTGGTAGTAGCTTTGGCACCTCTATTGGCGGCGGC ATATTTTTTCGCCTGTTGCGCACAAACCTTGGTCGCGGCTTCCAAGTCTTGGATGGCTCTCAAGACTTGTCGCAA TCACGCAAAGACCTCATTGTTCGCCTGCTTGCTGTTCCCGATGCCGTCTTTCATGGCGGTCTAAACCTAGACGAG CGACAAGTCGCCATTACTGGTTACAGTTTTGCCATCAAGGGGGTGTGGAAGGCTGCTGGCGTGCTTGTCATTGTC ATGGTTGCCGTCCAGGCCTTGACGGGCTGGACAAGCCCAAGCGCAAAGTCTCTGTCTAATGGCCAAGAAGGAGCA GTGCAAGACTCTGATGAGACAAGAGGCCAAGGGGAAGAGTAA |