Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2590
Gene name
LocationContig_182:33037..34769
Strand-
Gene length (bp)1732
Transcript length (bp)1539
Coding sequence length (bp)1539
Protein length (aa) 513

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 1.6E-48 36 476
PF00324 AA_permease Amino acid permease 3.3E-17 41 474

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 2 511 3.0E-69
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 11 505 9.0E-60
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 12 496 2.0E-54
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 8 496 9.0E-48
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 13 512 1.0E-43
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 2 511 3.0E-69
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 11 505 9.0E-60
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 12 496 2.0E-54
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 8 496 9.0E-48
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 13 512 1.0E-43
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 26 480 3.0E-42
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 16 501 5.0E-42
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 14 498 1.0E-41
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 4 499 2.0E-40
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 10 476 3.0E-37
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 13 509 1.0E-35
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 10 512 2.0E-34
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 4 499 1.0E-31
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 14 499 1.0E-29
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 4 510 8.0E-29
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 7 486 6.0E-27
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005215 transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.5

Transmembrane Domains

Domain # Start End Length
1 34 56 22
2 66 88 22
3 119 141 22
4 161 183 22
5 188 210 22
6 230 252 22
7 265 287 22
8 314 336 22
9 365 382 17
10 392 414 22
11 435 457 22
12 467 489 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2590
MKRDKRAVVNSGDDAAALASLGHAQELRRSFSPLALLGLAFAILNSWTALAAASSLALPSGGTSAVLWGLVVAGV
CNLCLAASLAEFLSAWPTAGGQYHWVALVAPQSSRRALSFVTGWISVCGWVALSASAPFFCSSFVGNIVAVFNGG
HELPPWQTFLLYVGFTSIGFVVNAFGTGLLPLITKAAFYWSMAGFVVMSITVLACAAPNFQSAAFVYGEFRNSTG
WPDGLAWLIGLLQGAFALTGFDAVAHMIEEIPEPQVEGPRIMLVTIVIGVVTGFISMSCLLFCLDSVEGVIESKL
GPLLQMLMDATESRAGSVCLLLLPIVCLVFTSVMLVCTSSRMTWAFARDGGMPLSHVFARVHARLGVPLNALLWT
QAWVIVFGCVNLGSTSGFSAITSASVVALGVTYAIPPAVNMARGRRMLPASRAFRLSETVGWMVNAVGILWTVLT
TVLFVFPPNLPTTASNMNYCIVAFGVMLCIACLTWLVDGRKHYQGPRMDRELLQQASMEETS*
Coding >OphauB2|2590
ATGAAGAGAGACAAGAGAGCAGTGGTGAACAGTGGGGATGACGCGGCCGCACTGGCTAGTCTGGGCCACGCACAA
GAGTTGCGCCGCTCCTTTTCGCCGCTGGCGCTGCTGGGCCTTGCCTTTGCCATACTCAACAGCTGGACGGCTCTG
GCTGCAGCCTCGTCGCTCGCACTACCCTCGGGTGGGACGAGCGCGGTGCTCTGGGGCTTGGTGGTGGCTGGAGTG
TGCAATCTGTGTCTGGCGGCGTCTCTGGCAGAGTTTCTGTCGGCGTGGCCCACGGCAGGCGGGCAGTACCATTGG
GTGGCTCTGGTGGCGCCACAGAGCAGTCGGCGTGCCTTGAGCTTCGTGACGGGCTGGATCAGCGTATGCGGATGG
GTGGCGTTGAGTGCCAGCGCGCCCTTTTTCTGCAGTTCCTTTGTCGGCAACATTGTGGCCGTGTTTAATGGCGGA
CACGAGCTACCGCCATGGCAGACGTTTCTGCTCTACGTTGGCTTCACGAGCATTGGCTTTGTCGTCAATGCCTTT
GGCACGGGTCTGCTGCCTCTAATCACCAAGGCGGCCTTTTACTGGTCCATGGCGGGCTTTGTGGTGATGAGCATT
ACGGTGCTGGCGTGTGCGGCTCCCAACTTCCAGTCGGCGGCGTTTGTCTATGGCGAGTTTCGAAACAGCACGGGC
TGGCCGGATGGCTTGGCGTGGCTCATTGGTCTGCTCCAAGGCGCTTTTGCGTTGACGGGCTTTGACGCCGTGGCG
CACATGATTGAAGAAATCCCAGAGCCTCAAGTCGAGGGCCCGCGCATCATGCTAGTTACTATTGTGATTGGCGTG
GTTACGGGATTTATATCCATGAGCTGTCTGTTGTTTTGTCTTGACAGTGTCGAGGGCGTCATCGAGTCCAAGCTT
GGGCCGCTGCTGCAAATGCTCATGGATGCGACGGAGAGCCGGGCGGGCAGTGTCTGCTTGCTTCTTTTGCCCATT
GTGTGTCTCGTATTTACGTCGGTGATGCTTGTTTGCACGAGCAGCCGCATGACGTGGGCTTTTGCACGCGACGGC
GGGATGCCCTTGAGCCATGTCTTTGCTCGGGTGCATGCGCGGCTTGGCGTGCCTCTGAATGCGCTCTTGTGGACG
CAGGCGTGGGTCATCGTCTTTGGGTGTGTGAATCTGGGCTCGACGAGTGGCTTCAGCGCCATCACGTCGGCGTCT
GTGGTGGCTCTCGGCGTCACGTATGCCATTCCTCCGGCGGTGAACATGGCCCGGGGGCGGCGCATGCTGCCTGCG
AGCCGGGCCTTTAGGCTGTCCGAGACGGTGGGTTGGATGGTCAACGCGGTGGGCATCTTGTGGACAGTCTTGACC
ACGGTGCTTTTTGTCTTTCCGCCTAATCTACCAACAACTGCTAGTAACATGAACTACTGCATAGTGGCCTTTGGC
GTTATGCTTTGCATAGCTTGTCTGACGTGGCTGGTTGATGGGCGCAAGCACTACCAAGGGCCCCGGATGGACCGA
GAGCTGCTTCAGCAGGCAAGCATGGAGGAGACAAGCTGA
Transcript >OphauB2|2590
ATGAAGAGAGACAAGAGAGCAGTGGTGAACAGTGGGGATGACGCGGCCGCACTGGCTAGTCTGGGCCACGCACAA
GAGTTGCGCCGCTCCTTTTCGCCGCTGGCGCTGCTGGGCCTTGCCTTTGCCATACTCAACAGCTGGACGGCTCTG
GCTGCAGCCTCGTCGCTCGCACTACCCTCGGGTGGGACGAGCGCGGTGCTCTGGGGCTTGGTGGTGGCTGGAGTG
TGCAATCTGTGTCTGGCGGCGTCTCTGGCAGAGTTTCTGTCGGCGTGGCCCACGGCAGGCGGGCAGTACCATTGG
GTGGCTCTGGTGGCGCCACAGAGCAGTCGGCGTGCCTTGAGCTTCGTGACGGGCTGGATCAGCGTATGCGGATGG
GTGGCGTTGAGTGCCAGCGCGCCCTTTTTCTGCAGTTCCTTTGTCGGCAACATTGTGGCCGTGTTTAATGGCGGA
CACGAGCTACCGCCATGGCAGACGTTTCTGCTCTACGTTGGCTTCACGAGCATTGGCTTTGTCGTCAATGCCTTT
GGCACGGGTCTGCTGCCTCTAATCACCAAGGCGGCCTTTTACTGGTCCATGGCGGGCTTTGTGGTGATGAGCATT
ACGGTGCTGGCGTGTGCGGCTCCCAACTTCCAGTCGGCGGCGTTTGTCTATGGCGAGTTTCGAAACAGCACGGGC
TGGCCGGATGGCTTGGCGTGGCTCATTGGTCTGCTCCAAGGCGCTTTTGCGTTGACGGGCTTTGACGCCGTGGCG
CACATGATTGAAGAAATCCCAGAGCCTCAAGTCGAGGGCCCGCGCATCATGCTAGTTACTATTGTGATTGGCGTG
GTTACGGGATTTATATCCATGAGCTGTCTGTTGTTTTGTCTTGACAGTGTCGAGGGCGTCATCGAGTCCAAGCTT
GGGCCGCTGCTGCAAATGCTCATGGATGCGACGGAGAGCCGGGCGGGCAGTGTCTGCTTGCTTCTTTTGCCCATT
GTGTGTCTCGTATTTACGTCGGTGATGCTTGTTTGCACGAGCAGCCGCATGACGTGGGCTTTTGCACGCGACGGC
GGGATGCCCTTGAGCCATGTCTTTGCTCGGGTGCATGCGCGGCTTGGCGTGCCTCTGAATGCGCTCTTGTGGACG
CAGGCGTGGGTCATCGTCTTTGGGTGTGTGAATCTGGGCTCGACGAGTGGCTTCAGCGCCATCACGTCGGCGTCT
GTGGTGGCTCTCGGCGTCACGTATGCCATTCCTCCGGCGGTGAACATGGCCCGGGGGCGGCGCATGCTGCCTGCG
AGCCGGGCCTTTAGGCTGTCCGAGACGGTGGGTTGGATGGTCAACGCGGTGGGCATCTTGTGGACAGTCTTGACC
ACGGTGCTTTTTGTCTTTCCGCCTAATCTACCAACAACTGCTAGTAACATGAACTACTGCATAGTGGCCTTTGGC
GTTATGCTTTGCATAGCTTGTCTGACGTGGCTGGTTGATGGGCGCAAGCACTACCAAGGGCCCCGGATGGACCGA
GAGCTGCTTCAGCAGGCAAGCATGGAGGAGACAAGCTGA
Gene >OphauB2|2590
ATGAAGAGAGACAAGAGAGCAGTGGTGAACAGTGGGGATGACGCGGCCGCACTGGCTAGTCTGGGCCACGCACAA
GAGTTGCGCCGCTCCTTTTCGCCGCTGGCGCTGCTGGGCCTTGCCTTTGCCATACTCAACAGCTGGACGGCTCTG
GCTGCAGCCTCGTCGCTCGCACTACCCTCGGGTGGGACGAGCGCGGTGCTCTGGGGCTTGGTGGTGGCTGGAGTG
TGCAATCTGTGTCTGGCGGCGTCTCTGGCAGAGTTTCTGTCGGCGTGGCCCACGGCAGGCGGGCAGTACCATTGG
GTGGCTCTGGTGGCGCCACAGAGCAGTCGGCGTGCCTTGAGCTTCGTGACGGGCTGGATCAGCGTATGCGGATGG
GTGGCGTTGAGTGCCAGCGCGCCCTTTTTCTGCAGTTCCTTTGTCGGCAACATTGTGGCCGTGTTTAATGGCGGA
CACGAGCTACCGCCATGGCAGACGTTTCTGCTCTACGTTGGCTTCACGAGCATTGGCTTTGTCGTCAATGCCTTT
GGCACGGGTCTGCTGCCTCTAATCACCAAGGCGGCCTTTTACTGGTCCATGGCGGGCTTTGTGGTGATGAGCATT
ACGGTGCTGGCGTGTGCGGCTCCCAACTTCCAGTCGGCGGCGTTTGTCTATGGCGAGTTTCGAAACAGCACGGGC
TGGCCGGATGGCTTGGCGTGGCTCATTGGTCTGCTCCAAGGCGCTTTTGCGTTGACGGGTGAGTTGCGAGAAGGA
GGAGAGTGAAGGAGGGAGAGTCGAGGAGAGGGAGGAGAGAAAAGAGAGACATGTGGTGACGGGACGGCTAACGCG
GCATCTGGCAGGCTTTGACGCCGTGGCGCACATGATTGAAGAAATCCCAGAGCCTCAAGTCGAGGGCCCGCGCAT
CATGCTAGTTACTATTGTGATTGGCGTGGTTACGGGATTTATATCCATGAGCTGTCTGTTGTTTTGTCTTGACAG
TGTCGAGGGCGTCATCGAGTCCAAGCTTGGGCCGCTGCTGCAAATGCTCATGGATGCGACGGAGAGCCGGGCGGG
CAGTGTCTGCTTGCTTCTTTTGCCCATTGTGTGTCTCGTATTTACGTCGGTGATGCTTGTTTGCACGAGCAGCCG
CATGACGTGGGCTTTTGCACGCGACGGCGGGATGCCCTTGAGCCATGTCTTTGCTCGGGTGCATGCGCGGCTTGG
CGTGCCTCTGAATGCGCTCTTGTGGACGCAGGCGTGGGTCATCGTCTTTGGGTGTGTGAATCTGGGCTCGACGAG
TGGCTTCAGCGCCATCACGTCGGCGTCTGTGGTGGCTCTCGGCGTCACGTATGCCATTCCTCCGGCGGTGAACAT
GGCCCGGGGGCGGCGCATGCTGCCTGCGAGCCGGGCCTTTAGGCTGTCCGAGACGGTGGGTTGGATGGTCAACGC
GGTGAGTGCATATATACCACCGTACTAAAATACTACTATTAGTATATATAGGCAATTCGCGTGTGCTAATGGCGG
TTGTGAGGCGCCACAGGTGGGCATCTTGTGGACAGTCTTGACCACGGTGCTTTTTGTCTTTCCGCCTAATCTACC
AACAACTGCTAGTAACATGAACTACTGCATAGTGGCCTTTGGCGTTATGCTTTGCATAGCTTGTCTGACGTGGCT
GGTTGATGGGCGCAAGCACTACCAAGGGCCCCGGATGGACCGAGAGCTGCTTCAGCAGGCAAGCATGGAGGAGAC
AAGCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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