© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2589 |
| Gene name | |
| Location | Contig_182:28179..31139 |
| Strand | - |
| Gene length (bp) | 2960 |
| Transcript length (bp) | 2862 |
| Coding sequence length (bp) | 2862 |
| Protein length (aa) | 954 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.6E-10 | 495 | 828 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 419 | 819 | 6.0E-13 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 414 | 860 | 9.0E-11 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 414 | 860 | 9.0E-11 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 414 | 860 | 2.0E-09 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 414 | 597 | 2.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 28 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 32 | 17 |
| 2 | 52 | 74 | 22 |
| 3 | 94 | 116 | 22 |
| 4 | 128 | 150 | 22 |
| 5 | 210 | 232 | 22 |
| 6 | 412 | 434 | 22 |
| 7 | 449 | 471 | 22 |
| 8 | 491 | 513 | 22 |
| 9 | 528 | 547 | 19 |
| 10 | 560 | 582 | 22 |
| 11 | 597 | 619 | 22 |
| 12 | 753 | 775 | 22 |
| 13 | 779 | 801 | 22 |
| 14 | 813 | 835 | 22 |
| 15 | 845 | 864 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2589 MATALDAQVPDRGPAVFAVTTATLVLASVFVGARIVCRHFIVRNVSWDDKIMALAWVFAFFLSFTIDLAAVNGLG KKDADIPGDDWGTLRHCEYVFSILYNPALMGTKTSILIFYLRLAKNTQIVLRYASWVTLAVVNLSGLVLTFMNIF QCTPIQAAWAADFHGPSTCIPLLTEFICAAPVNILTDLAILALPIPVLTGMRLPSRQKTILVITFALGIFVTIVD VVRIYYLQRAITDVPTGTTSDPESRFGGEADFAWNASLSLMWSAVEVNVGMACACIPTLKPLILKLLPAMLHDPN GTRTSSMSRGPMDPDMLRRGSMATGGAVAIKADEAFLADGDVPIKPVDFLTIPETAVIVGSSSRHASSDTATHAP TSFTASSAPENGVFFGFVNMAKPKSMLRAGTAESLKYCTIVSILFFLWGLSYGLLNTLNNAVAAVNHMRTSQTLG LTSAYFGGGYFFGPLLVGEWILRRDEHNRTKRHEKNEAEHVGGFKATFIVGLCIYGIGTIIFWPSAVTNSYGGFM LSNFVVGFGLSVLEVGANSFMVLCGPAEYGETRLLVAQGIQGVGSVLSGLLAQKVFFKGISQDNMPNSMTLINVQ WTYLGITLLCVILGLFFYYMPLPEVSDKELKRSASLLPSVDPKRRSIGGLELRTVSLILAVFTQWVYVASQESNS IFFRGLLISIFPSQDARPKSEHVETPDRKYNPDRPPGISLPIPDYLLVGHSAFAVSRFLVGYLTYLSVSRPRLPQ PRTYLSICVAICFICALLLVTVRPAKPDLLVIPVLFFFFAEGPIWPLIFALGLRGQGRRTKRAAAFITMGGSGPA FFPFIMYSIARYGNVQRAYIVIMALQVAMMAYPAFLEVSRAARRLVDQRPDLRHGLPSDDTPLHEIIARREAHTD VCDGQPSPGFLRRMSKGLDFGFGGAHKGSHPGGADHSADVSPRTSTADAARPV* |
| Coding | >OphauB2|2589 ATGGCCACGGCTTTGGATGCACAAGTCCCGGATCGTGGGCCCGCCGTCTTTGCCGTCACAACTGCCACCTTGGTG CTGGCCTCGGTCTTTGTTGGTGCTCGCATCGTCTGCCGCCACTTTATTGTCCGCAATGTTAGCTGGGACGACAAG ATTATGGCCCTGGCCTGGGTCTTTGCTTTTTTCCTCTCCTTCACCATTGACTTGGCTGCCGTCAATGGCCTGGGT AAAAAGGATGCCGATATCCCAGGCGACGACTGGGGTACTTTGCGCCACTGCGAATATGTCTTTTCCATTCTCTAC AATCCGGCCCTCATGGGAACAAAAACCAGCATCCTCATCTTCTACCTCCGCCTTGCAAAGAATACCCAAATTGTG CTGCGCTATGCCTCTTGGGTTACGCTCGCCGTTGTCAACCTCTCTGGCCTTGTCCTTACCTTTATGAACATTTTT CAGTGCACCCCGATACAGGCAGCCTGGGCGGCTGACTTTCACGGGCCTTCAACCTGCATCCCGCTCCTCACAGAG TTTATATGCGCTGCGCCAGTCAATATTCTTACTGATTTAGCTATTCTCGCTTTGCCCATTCCCGTGCTTACTGGC ATGCGCTTGCCCTCGCGCCAAAAGACTATTCTCGTCATCACCTTTGCTCTTGGAATCTTCGTCACCATTGTCGAT GTCGTTCGAATCTACTACCTGCAGCGCGCCATTACCGATGTGCCGACTGGCACCACGTCGGACCCCGAGTCTCGA TTTGGCGGCGAGGCTGATTTCGCCTGGAATGCCTCCCTCTCTCTTATGTGGAGCGCCGTCGAGGTCAATGTGGGC ATGGCTTGCGCCTGCATCCCTACCTTGAAACCCTTGATCCTCAAGCTTCTCCCCGCGATGCTTCATGATCCCAAC GGTACCAGGACATCGAGCATGTCTCGCGGTCCCATGGATCCTGACATGCTCCGCCGCGGCAGCATGGCCACGGGA GGTGCCGTCGCCATCAAGGCTGACGAGGCGTTTCTGGCCGACGGCGATGTCCCCATTAAACCTGTCGACTTTTTG ACTATTCCTGAAACGGCGGTCATCGTCGGCAGTAGTTCGCGACATGCGAGCTCAGACACGGCCACGCATGCTCCC ACTAGCTTCACCGCCTCTTCAGCTCCCGAAAATGGCGTCTTTTTTGGCTTTGTCAACATGGCCAAGCCCAAGAGC ATGCTCAGGGCTGGCACGGCGGAATCTCTAAAGTACTGCACCATTGTCTCGATTTTATTTTTTCTATGGGGTCTT TCCTATGGCCTCCTCAACACGCTTAATAACGCCGTTGCCGCTGTCAATCACATGCGAACATCACAGACCCTTGGT CTCACCAGCGCCTACTTTGGCGGCGGCTACTTTTTTGGTCCCTTGCTTGTTGGCGAGTGGATACTGCGCCGCGAC GAGCATAATCGGACCAAGCGCCATGAAAAGAATGAGGCTGAACACGTGGGAGGCTTCAAGGCGACCTTTATTGTC GGCCTGTGCATCTATGGCATCGGCACCATCATCTTTTGGCCCTCGGCTGTGACAAACTCTTATGGCGGCTTCATG CTGAGCAACTTTGTCGTGGGCTTTGGTCTCTCGGTCCTCGAGGTTGGTGCCAACTCATTCATGGTGCTCTGCGGG CCGGCAGAATATGGCGAGACGCGCCTGCTGGTGGCGCAGGGCATTCAGGGCGTTGGCAGCGTCTTGAGTGGCTTG CTAGCTCAAAAAGTCTTTTTCAAGGGCATTTCCCAGGATAATATGCCCAACAGCATGACTCTAATCAATGTGCAA TGGACCTATCTCGGCATCACTCTGCTCTGCGTCATTCTTGGTCTCTTTTTTTACTACATGCCGCTGCCAGAGGTG AGCGACAAGGAGTTGAAGCGATCGGCCAGTCTGTTGCCGTCTGTTGATCCTAAGCGGAGAAGCATTGGCGGCTTG GAGCTGCGGACCGTGAGCTTGATATTGGCCGTCTTTACGCAGTGGGTCTATGTCGCCTCCCAGGAGAGCAACAGC ATATTCTTTCGCGGCCTCCTTATTTCCATATTCCCGAGCCAAGACGCAAGGCCTAAAAGCGAGCACGTGGAGACG CCAGACCGAAAGTACAATCCAGATCGACCCCCGGGCATCTCTCTGCCAATTCCCGACTACCTGCTGGTTGGCCAT TCCGCCTTTGCCGTGTCGAGGTTTCTTGTCGGCTATCTCACCTATCTCTCCGTCTCGCGGCCGCGGCTGCCACAG CCACGCACCTATCTTAGCATTTGCGTCGCCATTTGCTTCATTTGCGCCCTGTTGCTCGTTACCGTGCGGCCCGCC AAGCCCGATCTTCTCGTCATTCCCGTCCTCTTCTTCTTCTTTGCCGAGGGGCCAATTTGGCCGTTAATATTTGCC CTTGGTCTGCGCGGACAGGGCCGTCGGACCAAGCGCGCAGCGGCCTTTATCACCATGGGAGGCTCAGGCCCGGCC TTTTTCCCCTTTATAATGTATAGCATTGCACGCTATGGCAACGTCCAGCGGGCCTATATTGTCATTATGGCGCTG CAAGTGGCCATGATGGCGTATCCTGCCTTTCTCGAAGTGTCACGGGCGGCGCGGCGGCTTGTTGACCAGCGGCCC GACTTGCGACACGGGCTGCCGAGCGACGACACGCCCTTGCACGAGATTATTGCGAGGCGCGAGGCACATACTGAT GTGTGTGATGGGCAGCCGAGCCCGGGCTTCTTGCGCCGCATGTCCAAGGGACTCGACTTTGGCTTTGGCGGAGCG CACAAGGGATCCCACCCGGGGGGTGCTGACCATAGTGCGGATGTTAGTCCGAGGACCAGTACGGCGGATGCGGCT CGGCCTGTTTAA |
| Transcript | >OphauB2|2589 ATGGCCACGGCTTTGGATGCACAAGTCCCGGATCGTGGGCCCGCCGTCTTTGCCGTCACAACTGCCACCTTGGTG CTGGCCTCGGTCTTTGTTGGTGCTCGCATCGTCTGCCGCCACTTTATTGTCCGCAATGTTAGCTGGGACGACAAG ATTATGGCCCTGGCCTGGGTCTTTGCTTTTTTCCTCTCCTTCACCATTGACTTGGCTGCCGTCAATGGCCTGGGT AAAAAGGATGCCGATATCCCAGGCGACGACTGGGGTACTTTGCGCCACTGCGAATATGTCTTTTCCATTCTCTAC AATCCGGCCCTCATGGGAACAAAAACCAGCATCCTCATCTTCTACCTCCGCCTTGCAAAGAATACCCAAATTGTG CTGCGCTATGCCTCTTGGGTTACGCTCGCCGTTGTCAACCTCTCTGGCCTTGTCCTTACCTTTATGAACATTTTT CAGTGCACCCCGATACAGGCAGCCTGGGCGGCTGACTTTCACGGGCCTTCAACCTGCATCCCGCTCCTCACAGAG TTTATATGCGCTGCGCCAGTCAATATTCTTACTGATTTAGCTATTCTCGCTTTGCCCATTCCCGTGCTTACTGGC ATGCGCTTGCCCTCGCGCCAAAAGACTATTCTCGTCATCACCTTTGCTCTTGGAATCTTCGTCACCATTGTCGAT GTCGTTCGAATCTACTACCTGCAGCGCGCCATTACCGATGTGCCGACTGGCACCACGTCGGACCCCGAGTCTCGA TTTGGCGGCGAGGCTGATTTCGCCTGGAATGCCTCCCTCTCTCTTATGTGGAGCGCCGTCGAGGTCAATGTGGGC ATGGCTTGCGCCTGCATCCCTACCTTGAAACCCTTGATCCTCAAGCTTCTCCCCGCGATGCTTCATGATCCCAAC GGTACCAGGACATCGAGCATGTCTCGCGGTCCCATGGATCCTGACATGCTCCGCCGCGGCAGCATGGCCACGGGA GGTGCCGTCGCCATCAAGGCTGACGAGGCGTTTCTGGCCGACGGCGATGTCCCCATTAAACCTGTCGACTTTTTG ACTATTCCTGAAACGGCGGTCATCGTCGGCAGTAGTTCGCGACATGCGAGCTCAGACACGGCCACGCATGCTCCC ACTAGCTTCACCGCCTCTTCAGCTCCCGAAAATGGCGTCTTTTTTGGCTTTGTCAACATGGCCAAGCCCAAGAGC ATGCTCAGGGCTGGCACGGCGGAATCTCTAAAGTACTGCACCATTGTCTCGATTTTATTTTTTCTATGGGGTCTT TCCTATGGCCTCCTCAACACGCTTAATAACGCCGTTGCCGCTGTCAATCACATGCGAACATCACAGACCCTTGGT CTCACCAGCGCCTACTTTGGCGGCGGCTACTTTTTTGGTCCCTTGCTTGTTGGCGAGTGGATACTGCGCCGCGAC GAGCATAATCGGACCAAGCGCCATGAAAAGAATGAGGCTGAACACGTGGGAGGCTTCAAGGCGACCTTTATTGTC GGCCTGTGCATCTATGGCATCGGCACCATCATCTTTTGGCCCTCGGCTGTGACAAACTCTTATGGCGGCTTCATG CTGAGCAACTTTGTCGTGGGCTTTGGTCTCTCGGTCCTCGAGGTTGGTGCCAACTCATTCATGGTGCTCTGCGGG CCGGCAGAATATGGCGAGACGCGCCTGCTGGTGGCGCAGGGCATTCAGGGCGTTGGCAGCGTCTTGAGTGGCTTG CTAGCTCAAAAAGTCTTTTTCAAGGGCATTTCCCAGGATAATATGCCCAACAGCATGACTCTAATCAATGTGCAA TGGACCTATCTCGGCATCACTCTGCTCTGCGTCATTCTTGGTCTCTTTTTTTACTACATGCCGCTGCCAGAGGTG AGCGACAAGGAGTTGAAGCGATCGGCCAGTCTGTTGCCGTCTGTTGATCCTAAGCGGAGAAGCATTGGCGGCTTG GAGCTGCGGACCGTGAGCTTGATATTGGCCGTCTTTACGCAGTGGGTCTATGTCGCCTCCCAGGAGAGCAACAGC ATATTCTTTCGCGGCCTCCTTATTTCCATATTCCCGAGCCAAGACGCAAGGCCTAAAAGCGAGCACGTGGAGACG CCAGACCGAAAGTACAATCCAGATCGACCCCCGGGCATCTCTCTGCCAATTCCCGACTACCTGCTGGTTGGCCAT TCCGCCTTTGCCGTGTCGAGGTTTCTTGTCGGCTATCTCACCTATCTCTCCGTCTCGCGGCCGCGGCTGCCACAG CCACGCACCTATCTTAGCATTTGCGTCGCCATTTGCTTCATTTGCGCCCTGTTGCTCGTTACCGTGCGGCCCGCC AAGCCCGATCTTCTCGTCATTCCCGTCCTCTTCTTCTTCTTTGCCGAGGGGCCAATTTGGCCGTTAATATTTGCC CTTGGTCTGCGCGGACAGGGCCGTCGGACCAAGCGCGCAGCGGCCTTTATCACCATGGGAGGCTCAGGCCCGGCC TTTTTCCCCTTTATAATGTATAGCATTGCACGCTATGGCAACGTCCAGCGGGCCTATATTGTCATTATGGCGCTG CAAGTGGCCATGATGGCGTATCCTGCCTTTCTCGAAGTGTCACGGGCGGCGCGGCGGCTTGTTGACCAGCGGCCC GACTTGCGACACGGGCTGCCGAGCGACGACACGCCCTTGCACGAGATTATTGCGAGGCGCGAGGCACATACTGAT GTGTGTGATGGGCAGCCGAGCCCGGGCTTCTTGCGCCGCATGTCCAAGGGACTCGACTTTGGCTTTGGCGGAGCG CACAAGGGATCCCACCCGGGGGGTGCTGACCATAGTGCGGATGTTAGTCCGAGGACCAGTACGGCGGATGCGGCT CGGCCTGTTTAA |
| Gene | >OphauB2|2589 ATGGCCACGGCTTTGGATGCACAAGTCCCGGATCGTGGGCCCGCCGTCTTTGCCGTCACAACTGCCACCTTGGTG CTGGCCTCGGTCTTTGTTGGTGCTCGCATCGTCTGCCGCCACTTTATTGTCCGCAATGTTAGCTGGGACGACAAG ATTATGGCCCTGGCCTGGGTCTTTGCTTTTTTCCTCTCCTTCACCATTGACTTGGCTGCCGTCAATGGCCTGGGT AAAAAGGATGCCGATATCCCAGGCGACGACTGGGGTACTTTGCGCCACTGCGAATATGTCTTTTCCATTCTCTAC GTGAGTGGCGTTGAATCCTCTTTTTTTTTCCTTTTTTTTTCTTTTTTTTTGGCGGTGGGGGGCTTCATCCTCTTG CTGGCAGCTAACCATGAGTCTAGAATCCGGCCCTCATGGGAACAAAAACCAGCATCCTCATCTTCTACCTCCGCC TTGCAAAGAATACCCAAATTGTGCTGCGCTATGCCTCTTGGGTTACGCTCGCCGTTGTCAACCTCTCTGGCCTTG TCCTTACCTTTATGAACATTTTTCAGTGCACCCCGATACAGGCAGCCTGGGCGGCTGACTTTCACGGGCCTTCAA CCTGCATCCCGCTCCTCACAGAGTTTATATGCGCTGCGCCAGTCAATATTCTTACTGATTTAGCTATTCTCGCTT TGCCCATTCCCGTGCTTACTGGCATGCGCTTGCCCTCGCGCCAAAAGACTATTCTCGTCATCACCTTTGCTCTTG GAATCTTCGTCACCATTGTCGATGTCGTTCGAATCTACTACCTGCAGCGCGCCATTACCGATGTGCCGACTGGCA CCACGTCGGACCCCGAGTCTCGATTTGGCGGCGAGGCTGATTTCGCCTGGAATGCCTCCCTCTCTCTTATGTGGA GCGCCGTCGAGGTCAATGTGGGCATGGCTTGCGCCTGCATCCCTACCTTGAAACCCTTGATCCTCAAGCTTCTCC CCGCGATGCTTCATGATCCCAACGGTACCAGGACATCGAGCATGTCTCGCGGTCCCATGGATCCTGACATGCTCC GCCGCGGCAGCATGGCCACGGGAGGTGCCGTCGCCATCAAGGCTGACGAGGCGTTTCTGGCCGACGGCGATGTCC CCATTAAACCTGTCGACTTTTTGACTATTCCTGAAACGGCGGTCATCGTCGGCAGTAGTTCGCGACATGCGAGCT CAGACACGGCCACGCATGCTCCCACTAGCTTCACCGCCTCTTCAGCTCCCGAAAATGGCGTCTTTTTTGGCTTTG TCAACATGGCCAAGCCCAAGAGCATGCTCAGGGCTGGCACGGCGGAATCTCTAAAGTACTGCACCATTGTCTCGA TTTTATTTTTTCTATGGGGTCTTTCCTATGGCCTCCTCAACACGCTTAATAACGCCGTTGCCGCTGTCAATCACA TGCGAACATCACAGACCCTTGGTCTCACCAGCGCCTACTTTGGCGGCGGCTACTTTTTTGGTCCCTTGCTTGTTG GCGAGTGGATACTGCGCCGCGACGAGCATAATCGGACCAAGCGCCATGAAAAGAATGAGGCTGAACACGTGGGAG GCTTCAAGGCGACCTTTATTGTCGGCCTGTGCATCTATGGCATCGGCACCATCATCTTTTGGCCCTCGGCTGTGA CAAACTCTTATGGCGGCTTCATGCTGAGCAACTTTGTCGTGGGCTTTGGTCTCTCGGTCCTCGAGGTTGGTGCCA ACTCATTCATGGTGCTCTGCGGGCCGGCAGAATATGGCGAGACGCGCCTGCTGGTGGCGCAGGGCATTCAGGGCG TTGGCAGCGTCTTGAGTGGCTTGCTAGCTCAAAAAGTCTTTTTCAAGGGCATTTCCCAGGATAATATGCCCAACA GCATGACTCTAATCAATGTGCAATGGACCTATCTCGGCATCACTCTGCTCTGCGTCATTCTTGGTCTCTTTTTTT ACTACATGCCGCTGCCAGAGGTGAGCGACAAGGAGTTGAAGCGATCGGCCAGTCTGTTGCCGTCTGTTGATCCTA AGCGGAGAAGCATTGGCGGCTTGGAGCTGCGGACCGTGAGCTTGATATTGGCCGTCTTTACGCAGTGGGTCTATG TCGCCTCCCAGGAGAGCAACAGCATATTCTTTCGCGGCCTCCTTATTTCCATATTCCCGAGCCAAGACGCAAGGC CTAAAAGCGAGCACGTGGAGACGCCAGACCGAAAGTACAATCCAGATCGACCCCCGGGCATCTCTCTGCCAATTC CCGACTACCTGCTGGTTGGCCATTCCGCCTTTGCCGTGTCGAGGTTTCTTGTCGGCTATCTCACCTATCTCTCCG TCTCGCGGCCGCGGCTGCCACAGCCACGCACCTATCTTAGCATTTGCGTCGCCATTTGCTTCATTTGCGCCCTGT TGCTCGTTACCGTGCGGCCCGCCAAGCCCGATCTTCTCGTCATTCCCGTCCTCTTCTTCTTCTTTGCCGAGGGGC CAATTTGGCCGTTAATATTTGCCCTTGGTCTGCGCGGACAGGGCCGTCGGACCAAGCGCGCAGCGGCCTTTATCA CCATGGGAGGCTCAGGCCCGGCCTTTTTCCCCTTTATAATGTATAGCATTGCACGCTATGGCAACGTCCAGCGGG CCTATATTGTCATTATGGCGCTGCAAGTGGCCATGATGGCGTATCCTGCCTTTCTCGAAGTGTCACGGGCGGCGC GGCGGCTTGTTGACCAGCGGCCCGACTTGCGACACGGGCTGCCGAGCGACGACACGCCCTTGCACGAGATTATTG CGAGGCGCGAGGCACATACTGATGTGTGTGATGGGCAGCCGAGCCCGGGCTTCTTGCGCCGCATGTCCAAGGGAC TCGACTTTGGCTTTGGCGGAGCGCACAAGGGATCCCACCCGGGGGGTGCTGACCATAGTGCGGATGTTAGTCCGA GGACCAGTACGGCGGATGCGGCTCGGCCTGTTTAA |