© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|256 |
| Gene name | |
| Location | Contig_10:261901..263903 |
| Strand | + |
| Gene length (bp) | 2002 |
| Transcript length (bp) | 1581 |
| Coding sequence length (bp) | 1581 |
| Protein length (aa) | 527 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 1.3E-51 | 57 | 501 |
| PF00324 | AA_permease | Amino acid permease | 4.7E-29 | 62 | 515 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 31 | 524 | 7.0E-69 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 5 | 517 | 3.0E-63 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 41 | 524 | 2.0E-58 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 1 | 524 | 4.0E-58 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 41 | 497 | 8.0E-55 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60113|YG64_SCHPO | Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 | 31 | 524 | 7.0E-69 |
| sp|P19807|HNM1_YEAST | Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 | 5 | 517 | 3.0E-63 |
| sp|Q9ZU50|BAT1_ARATH | Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 | 41 | 524 | 2.0E-58 |
| sp|O74537|YCQ4_SCHPO | Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 | 1 | 524 | 4.0E-58 |
| sp|B9EXZ6|BAT1_ORYSJ | Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 | 41 | 497 | 8.0E-55 |
| sp|P36029|TPO5_YEAST | Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 | 33 | 521 | 1.0E-54 |
| sp|O59942|AAP2_NEUCR | Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 | 38 | 521 | 9.0E-54 |
| sp|P32837|UGA4_YEAST | GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 | 37 | 498 | 2.0E-48 |
| sp|Q09887|YC9D_SCHPO | Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 | 16 | 521 | 1.0E-47 |
| sp|Q9US40|YFZ1_SCHPO | Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 | 1 | 521 | 4.0E-47 |
| sp|Q9C0Z0|YKM2_SCHPO | Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 | 1 | 524 | 3.0E-41 |
| sp|Q10087|YAO8_SCHPO | Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 | 11 | 526 | 5.0E-40 |
| sp|O74248|GPT1_CANAX | Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 | 36 | 521 | 6.0E-37 |
| sp|Q9UT18|THI9_SCHPO | Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 | 8 | 498 | 3.0E-27 |
| sp|P53744|BIO5_YEAST | 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 | 32 | 508 | 1.0E-23 |
| sp|O59813|YCT3_SCHPO | Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 | 4 | 499 | 2.0E-21 |
| sp|Q9P768|YI26_SCHPO | Uncharacterized amino-acid permease P7G5.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAP7G5.06 PE=3 SV=1 | 11 | 476 | 5.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 68 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 57 | 79 | 22 |
| 2 | 89 | 108 | 19 |
| 3 | 141 | 163 | 22 |
| 4 | 186 | 208 | 22 |
| 5 | 215 | 234 | 19 |
| 6 | 262 | 281 | 19 |
| 7 | 294 | 316 | 22 |
| 8 | 344 | 366 | 22 |
| 9 | 396 | 418 | 22 |
| 10 | 422 | 444 | 22 |
| 11 | 457 | 479 | 22 |
| 12 | 494 | 513 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|256 MDARRPSQSKHHEMLQQGNMDPKLEKAPRPSISDGAEDQILESLGYKAELARNRSALQVAFMSFVLAAIPYGLAT TLNYPLVGGGPVNIIWGWVLVSAIILCVASSLGEITSVYPTAGGVYYQAFMLASARWRRIASWTCGWLYVVGNIA ITLSVNFGTTLFLVSCINVFEKAPGVPIFDASNWQTYLIFLAITILCNATSALGNRWLPWLDTAAIFVTFGGVIA IMISVLVIAKHGHHNAKYVFTHFESHSGWPDGWSFCVGLLHAGYATSSTGMVISMCEEVQKPAVQVPKAIVGTIG LNFIAGLIFLIPLVFVLPDIQTLIDSGQPVPLIIKDAVGSSGGAFGLLVPLLLLAFICGVGCTTAASRCTWAFAR DGAIPGSKWWMKVNRKLDVPLNAMLLSTAVQLILGLINFGSSAAFNAFSGVGVICLTASYACPIAISLWSGRKQV RTGQFYLGPIGILCNIVAIAWSLLALPLFCMPSVVPATASTVNYAPVVFVIAMAISAIWYWAWGHKNYAGPPVQG E* |
| Coding | >OphauB2|256 ATGGATGCCCGTCGACCCAGCCAAAGCAAGCATCACGAAATGCTGCAACAAGGCAACATGGACCCCAAGCTAGAA AAGGCTCCGCGGCCCTCCATCTCGGACGGGGCCGAGGACCAGATCCTCGAAAGCCTGGGATACAAGGCCGAGCTG GCGCGCAACCGCTCGGCGCTCCAAGTCGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCGTATGGCTTGGCTACG ACGCTCAACTATCCCCTGGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTCTCTGCCATTATT CTCTGTGTCGCTTCGTCCCTTGGTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTGTATACTACCAGGCCTTT ATGCTTGCCTCTGCCCGTTGGCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCA ATCACCCTTTCTGTCAACTTTGGCACAACTCTCTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAAGCGCCCGGC GTTCCAATTTTTGATGCTTCAAATTGGCAGACCTATCTCATCTTTCTGGCCATTACCATTTTGTGCAATGCTACT TCTGCACTCGGTAATCGATGGCTGCCCTGGCTTGATACGGCCGCAATCTTTGTGACGTTTGGTGGCGTCATCGCC ATCATGATTTCCGTTCTCGTCATTGCCAAGCATGGCCACCACAATGCGAAATACGTCTTTACGCACTTTGAGTCA CACTCGGGCTGGCCAGACGGGTGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCGTCAACAGGC ATGGTAATCTCCATGTGCGAAGAAGTGCAGAAGCCTGCAGTCCAAGTACCCAAGGCTATTGTCGGAACCATTGGC CTCAACTTTATAGCCGGACTCATCTTTTTGATCCCGCTAGTCTTTGTGCTGCCCGACATCCAGACGCTGATTGAC TCGGGACAGCCAGTGCCCTTGATCATCAAGGACGCTGTTGGGTCCTCGGGCGGCGCCTTTGGGCTCCTGGTGCCC CTTCTTCTGCTTGCCTTTATTTGCGGTGTGGGTTGCACAACTGCTGCCTCACGGTGCACATGGGCATTTGCCAGA GACGGCGCCATTCCGGGCTCCAAGTGGTGGATGAAGGTCAACCGCAAGCTCGACGTGCCTCTGAATGCCATGTTG CTAAGCACAGCTGTCCAACTCATCCTCGGCCTCATCAACTTTGGCTCGTCTGCCGCCTTTAACGCCTTTTCCGGC GTTGGTGTCATTTGCCTGACTGCGTCATACGCCTGTCCGATAGCGATTAGCTTGTGGAGCGGAAGGAAACAGGTC AGGACGGGCCAGTTTTACCTTGGGCCCATTGGCATACTGTGCAACATTGTTGCAATCGCATGGTCTCTTCTGGCA CTACCGCTGTTTTGCATGCCTTCTGTCGTTCCAGCCACCGCCTCGACAGTCAACTATGCGCCAGTCGTCTTTGTC ATTGCCATGGCCATTTCGGCAATATGGTACTGGGCCTGGGGCCACAAGAACTACGCTGGACCGCCTGTTCAGGGA GAGTAG |
| Transcript | >OphauB2|256 ATGGATGCCCGTCGACCCAGCCAAAGCAAGCATCACGAAATGCTGCAACAAGGCAACATGGACCCCAAGCTAGAA AAGGCTCCGCGGCCCTCCATCTCGGACGGGGCCGAGGACCAGATCCTCGAAAGCCTGGGATACAAGGCCGAGCTG GCGCGCAACCGCTCGGCGCTCCAAGTCGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCGTATGGCTTGGCTACG ACGCTCAACTATCCCCTGGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTCTCTGCCATTATT CTCTGTGTCGCTTCGTCCCTTGGTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTGTATACTACCAGGCCTTT ATGCTTGCCTCTGCCCGTTGGCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCA ATCACCCTTTCTGTCAACTTTGGCACAACTCTCTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAAGCGCCCGGC GTTCCAATTTTTGATGCTTCAAATTGGCAGACCTATCTCATCTTTCTGGCCATTACCATTTTGTGCAATGCTACT TCTGCACTCGGTAATCGATGGCTGCCCTGGCTTGATACGGCCGCAATCTTTGTGACGTTTGGTGGCGTCATCGCC ATCATGATTTCCGTTCTCGTCATTGCCAAGCATGGCCACCACAATGCGAAATACGTCTTTACGCACTTTGAGTCA CACTCGGGCTGGCCAGACGGGTGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCGTCAACAGGC ATGGTAATCTCCATGTGCGAAGAAGTGCAGAAGCCTGCAGTCCAAGTACCCAAGGCTATTGTCGGAACCATTGGC CTCAACTTTATAGCCGGACTCATCTTTTTGATCCCGCTAGTCTTTGTGCTGCCCGACATCCAGACGCTGATTGAC TCGGGACAGCCAGTGCCCTTGATCATCAAGGACGCTGTTGGGTCCTCGGGCGGCGCCTTTGGGCTCCTGGTGCCC CTTCTTCTGCTTGCCTTTATTTGCGGTGTGGGTTGCACAACTGCTGCCTCACGGTGCACATGGGCATTTGCCAGA GACGGCGCCATTCCGGGCTCCAAGTGGTGGATGAAGGTCAACCGCAAGCTCGACGTGCCTCTGAATGCCATGTTG CTAAGCACAGCTGTCCAACTCATCCTCGGCCTCATCAACTTTGGCTCGTCTGCCGCCTTTAACGCCTTTTCCGGC GTTGGTGTCATTTGCCTGACTGCGTCATACGCCTGTCCGATAGCGATTAGCTTGTGGAGCGGAAGGAAACAGGTC AGGACGGGCCAGTTTTACCTTGGGCCCATTGGCATACTGTGCAACATTGTTGCAATCGCATGGTCTCTTCTGGCA CTACCGCTGTTTTGCATGCCTTCTGTCGTTCCAGCCACCGCCTCGACAGTCAACTATGCGCCAGTCGTCTTTGTC ATTGCCATGGCCATTTCGGCAATATGGTACTGGGCCTGGGGCCACAAGAACTACGCTGGACCGCCTGTTCAGGGA GAGTAG |
| Gene | >OphauB2|256 ATGGATGCCCGTCGACCCAGCCAAAGCAAGCATCACGAAATGCTGCAACAAGGCAACATGGACCCCAAGCTAGAA AAGGCTCCGCGGCCCTCCATCTCGGACGGGGCCGAGGACCAGATCCTCGAAAGCCTGGGATACAAGGCCGAGCTG GCGCGCAACCGCTCGGCGCTCCAAGTCGCCTTCATGTCCTTTGTGCTCGCTGCCATTCCGTATGGCTTGGCTACG ACGCTCAACTATCCCCTGGTGGGCGGCGGCCCCGTCAACATCATCTGGGGCTGGGTGCTTGTCTCTGCCATTATT CTCTGTGTCGCTTCGTCCCTTGGTGAGATTACAAGTGTCTACCCGACAGCCGGAGGTATATACTTGACCGCTCCG AGTCCCATCAACCTGTCTTGTGCGAAAATAAGACGCATCGCGCTCGAATCCTTCCCGCCCCCCTGCTCGCTCAGA GGTGCATAATGGTTGATTGTCGTCTTCTCCTTCAGGTGTATACTACCAGGCCTTTATGCTTGCCTCTGCCCGTTG GCGGCGCATTGCAAGCTGGACCTGTGGATGGCTGTATGTTGTCGGCAACATTGCAATCACCCTTTCTGTCAACTT TGGCACAACTCTCTTTCTCGTCTCGTGCATCAATGTCTTTGAAAAAGCGCCCGGCGTTCCAATTTTTGATGCTTC AAATTGGCAGACCTATCTCATCTTTCTGGCCATTACCATTTTGTGCAATGCTACTTCTGCACTCGGTAATCGATG GCTGCCCTGGCTTGATGTAAGAATCTGCAGTCCACGCTTCGTCTTGTTGTATTTTTCTTTTTTAATTAAAAAAAA AAAAGAAGAATCATTTTCATCTCTCTTTTTTTTTTCCGACGGCCTCCTCAGTGTCGTGTCACCCCATCTGTCCAG TCTGTGTTGCTAACCAAGTCGCTCATCAGACGGCCGCAATCTTTGTGACGTTTGGTGGCGTCATCGCCATCATGA TTTCCGTTCTCGTCATTGCCAAGCATGGCCACCACAATGCGAAATACGTCTTTACGCACTTTGAGTCACACTCGG GCTGGCCAGACGGGTGGTCGTTTTGCGTCGGACTTCTCCATGCTGGCTATGCCACGTCGTCAACAGGCATGGTAA TCTCGTGAGACCAGCCCAAATCCCAAGGCGGCAGTGACTTGTTTGCGCTGACGAGGAGCTGCAGCATGTGCGAAG AAGTGCAGAAGCCTGCAGTCCAAGTACCCAAGGCTATTGTCGGAACCATTGGCCTCAACTTTATAGCCGGACTCA TCTTTTTGATCCCGCTAGTCTTTGTGCTGCCCGACATCCAGACGCTGATTGACTCGGGACAGCCAGTGCCCTTGA TCATCAAGGACGCTGTTGGGTCCTCGGGCGGCGCCTTTGGGCTCCTGGTGCCCCTTCTTCTGCTTGCCTTTATTT GCGGTGTGGGTTGCACAACTGCTGCCTCACGGTGCACATGGGCATTTGCCAGAGACGGCGCCATTCCGGGCTCCA AGTGGTGGATGAAGGTCAACCGCAAGCTCGACGTGCCTCTGAATGCCATGTTGCTAAGCACAGCTGTCCAACTCA TCCTCGGCCTCATCAACTTTGGCTCGTCTGCCGCCTTTAACGCCTTTTCCGGCGTTGGTGTCATTTGCCTGACTG CGTCATACGCCTGTCCGATAGCGATTAGCTTGTGGAGCGGAAGGAAACAGGTCAGGACGGGCCAGTTTTACCTTG GGCCCATTGGCATACTGTGCAACATTGTTGCAATCGGTTCGTCGATACCCCTCTTCTGCTTGGCGTCCAGTGTTG AAACGTTGAGACGAGACTAACTTGAGCAGCATGGTCTCTTCTGGCACTACCGCTGTTTTGCATGCCTTCTGTCGT TCCAGCCACCGCCTCGACAGTCAACTATGCGCCAGTCGTCTTTGTCATTGCCATGGCCATTTCGGCAATATGGTA CTGGGCCTGGGGCCACAAGAACTACGCTGGACCGCCTGTTCAGGGAGAGTAG |