© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | OphauB2|255 |
| Gene name | |
| Location | Contig_10:260128..260569 |
| Strand | + |
| Gene length (bp) | 441 |
| Transcript length (bp) | 441 |
| Coding sequence length (bp) | 441 |
| Protein length (aa) | 147 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00241 | Cofilin_ADF | Cofilin/tropomyosin-type actin-binding protein | 7.4E-25 | 10 | 130 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P34121|COAA_DICDI | Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1 | 1 | 145 | 3.0E-23 |
| sp|Q6GM14|DBNLB_XENLA | Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1 | 5 | 142 | 1.0E-13 |
| sp|A6H7G2|DBNL_BOVIN | Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1 | 9 | 141 | 5.0E-13 |
| sp|Q14019|COTL1_HUMAN | Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3 | 4 | 142 | 2.0E-12 |
| sp|Q7ZXQ9|DBNLA_XENLA | Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1 | 5 | 142 | 2.0E-12 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P34121|COAA_DICDI | Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1 | 1 | 145 | 3.0E-23 |
| sp|Q6GM14|DBNLB_XENLA | Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1 | 5 | 142 | 1.0E-13 |
| sp|A6H7G2|DBNL_BOVIN | Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1 | 9 | 141 | 5.0E-13 |
| sp|Q14019|COTL1_HUMAN | Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3 | 4 | 142 | 2.0E-12 |
| sp|Q7ZXQ9|DBNLA_XENLA | Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1 | 5 | 142 | 2.0E-12 |
| sp|Q2HJ57|COTL1_BOVIN | Coactosin-like protein OS=Bos taurus GN=COTL1 PE=2 SV=3 | 4 | 142 | 3.0E-12 |
| sp|B0BNA5|COTL1_RAT | Coactosin-like protein OS=Rattus norvegicus GN=Cotl1 PE=1 SV=1 | 4 | 142 | 3.0E-12 |
| sp|Q9CQI6|COTL1_MOUSE | Coactosin-like protein OS=Mus musculus GN=Cotl1 PE=1 SV=3 | 4 | 142 | 7.0E-12 |
| sp|Q9UJU6|DBNL_HUMAN | Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1 | 12 | 142 | 2.0E-11 |
| sp|Q557J6|DBNL_DICDI | Drebrin-like protein OS=Dictyostelium discoideum GN=abpE-1 PE=2 SV=1 | 1 | 144 | 3.0E-10 |
| sp|Q9VU84|DBNL_DROME | Drebrin-like protein OS=Drosophila melanogaster GN=Abp1 PE=1 SV=1 | 7 | 95 | 2.0E-09 |
| sp|Q9QXS6|DREB_MOUSE | Drebrin OS=Mus musculus GN=Dbn1 PE=1 SV=4 | 8 | 133 | 8.0E-09 |
| sp|Q07266|DREB_RAT | Drebrin OS=Rattus norvegicus GN=Dbn1 PE=1 SV=3 | 8 | 133 | 8.0E-09 |
| sp|Q16643|DREB_HUMAN | Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4 | 8 | 133 | 2.0E-08 |
| sp|Q9P7E8|APP1_SCHPO | Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=app1 PE=2 SV=1 | 7 | 142 | 4.0E-08 |
| sp|Q9JHL4|DBNL_RAT | Drebrin-like protein OS=Rattus norvegicus GN=Dbnl PE=1 SV=1 | 12 | 142 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003779 | actin binding | Yes |
| GO:0005515 | protein binding | No |
| GO:0008092 | cytoskeletal protein binding | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|255 MSGLDSADIVAAYEAVRSDKDTTDWLLISHATPTDSTLSLSKTGSGGMAELVAALNDSQVQYGYVRIEYANDAES RRVKFVLIVWIGDKTRVMRKARVSIESGQVKQALHHHSIALTATDRAELEEKDVVTRLRRAGGADYNGGRG* |
| Coding | >OphauB2|255 ATGAGCGGCCTCGACTCAGCCGACATTGTGGCTGCATACGAAGCGGTGCGAAGCGACAAGGACACGACCGACTGG CTCCTCATCTCCCACGCCACGCCCACCGACAGCACGCTCTCGCTCAGCAAGACTGGCAGCGGCGGCATGGCGGAG CTCGTGGCGGCGCTCAACGACTCTCAAGTACAGTATGGCTACGTGCGCATCGAGTACGCAAACGACGCCGAGAGC AGGCGCGTAAAGTTTGTCCTGATTGTGTGGATCGGCGACAAGACCAGGGTGATGCGCAAGGCGCGCGTCAGCATT GAGAGCGGCCAGGTCAAGCAGGCGCTGCATCACCATAGCATTGCCCTAACGGCAACGGATCGGGCGGAGCTGGAG GAAAAGGACGTCGTGACGAGGCTGAGAAGAGCGGGTGGCGCAGACTATAACGGAGGGCGTGGCTGA |
| Transcript | >OphauB2|255 ATGAGCGGCCTCGACTCAGCCGACATTGTGGCTGCATACGAAGCGGTGCGAAGCGACAAGGACACGACCGACTGG CTCCTCATCTCCCACGCCACGCCCACCGACAGCACGCTCTCGCTCAGCAAGACTGGCAGCGGCGGCATGGCGGAG CTCGTGGCGGCGCTCAACGACTCTCAAGTACAGTATGGCTACGTGCGCATCGAGTACGCAAACGACGCCGAGAGC AGGCGCGTAAAGTTTGTCCTGATTGTGTGGATCGGCGACAAGACCAGGGTGATGCGCAAGGCGCGCGTCAGCATT GAGAGCGGCCAGGTCAAGCAGGCGCTGCATCACCATAGCATTGCCCTAACGGCAACGGATCGGGCGGAGCTGGAG GAAAAGGACGTCGTGACGAGGCTGAGAAGAGCGGGTGGCGCAGACTATAACGGAGGGCGTGGCTGA |
| Gene | >OphauB2|255 ATGAGCGGCCTCGACTCAGCCGACATTGTGGCTGCATACGAAGCGGTGCGAAGCGACAAGGACACGACCGACTGG CTCCTCATCTCCCACGCCACGCCCACCGACAGCACGCTCTCGCTCAGCAAGACTGGCAGCGGCGGCATGGCGGAG CTCGTGGCGGCGCTCAACGACTCTCAAGTACAGTATGGCTACGTGCGCATCGAGTACGCAAACGACGCCGAGAGC AGGCGCGTAAAGTTTGTCCTGATTGTGTGGATCGGCGACAAGACCAGGGTGATGCGCAAGGCGCGCGTCAGCATT GAGAGCGGCCAGGTCAAGCAGGCGCTGCATCACCATAGCATTGCCCTAACGGCAACGGATCGGGCGGAGCTGGAG GAAAAGGACGTCGTGACGAGGCTGAGAAGAGCGGGTGGCGCAGACTATAACGGAGGGCGTGGCTGA |