Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2547
Gene name
LocationContig_18:236585..237227
Strand-
Gene length (bp)642
Transcript length (bp)570
Coding sequence length (bp)570
Protein length (aa) 190

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14618 DUF4452 Domain of unknown function (DUF4452) 3.2E-73 23 184

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q10296|YD42_SCHPO Uncharacterized protein C22H10.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22H10.02 PE=1 SV=2 61 166 2.0E-07

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2547
MASYYHMNAQASSHGSPVSHNNHHGGGRNRRAPRLSVSHGPQQRHLKGPRSIKEFNEPVLLSAFRLKFEAGRSFD
LEDDMEFCPNLLTESDLVSISSGSERSSLASNSPESSPTQQPQTVAPGFSLNSTSPAFIPPSYQTHQNNIKLHHP
SATRGRNAIPIVNPATGVTMPSPSPSVSPGMQQHLGRRW*
Coding >OphauB2|2547
ATGGCCTCATACTATCATATGAATGCACAAGCGTCGTCACATGGCTCGCCCGTGTCGCACAATAACCACCACGGC
GGCGGTCGCAACCGCAGGGCCCCTCGTCTGTCTGTTTCTCACGGGCCTCAGCAAAGGCACCTCAAGGGTCCCCGC
AGTATAAAAGAATTCAACGAGCCTGTCCTTCTCTCCGCTTTTCGTCTCAAGTTTGAGGCTGGCCGATCCTTTGAC
CTCGAGGATGATATGGAATTTTGCCCAAATTTGCTTACTGAGTCGGACCTTGTTTCCATCTCCAGTGGCTCGGAA
CGTTCGTCGCTTGCTAGCAATTCGCCCGAATCCTCTCCTACTCAGCAACCGCAGACAGTGGCTCCTGGCTTTTCG
CTCAATTCCACGTCCCCCGCCTTCATCCCGCCCAGCTACCAAACTCACCAAAACAATATCAAACTACATCATCCC
TCAGCCACCCGCGGACGCAATGCCATTCCTATTGTAAACCCTGCAACGGGGGTCACCATGCCAAGTCCTTCTCCA
TCGGTGTCGCCCGGCATGCAACAGCATCTCGGCCGTCGGTGGTAA
Transcript >OphauB2|2547
ATGGCCTCATACTATCATATGAATGCACAAGCGTCGTCACATGGCTCGCCCGTGTCGCACAATAACCACCACGGC
GGCGGTCGCAACCGCAGGGCCCCTCGTCTGTCTGTTTCTCACGGGCCTCAGCAAAGGCACCTCAAGGGTCCCCGC
AGTATAAAAGAATTCAACGAGCCTGTCCTTCTCTCCGCTTTTCGTCTCAAGTTTGAGGCTGGCCGATCCTTTGAC
CTCGAGGATGATATGGAATTTTGCCCAAATTTGCTTACTGAGTCGGACCTTGTTTCCATCTCCAGTGGCTCGGAA
CGTTCGTCGCTTGCTAGCAATTCGCCCGAATCCTCTCCTACTCAGCAACCGCAGACAGTGGCTCCTGGCTTTTCG
CTCAATTCCACGTCCCCCGCCTTCATCCCGCCCAGCTACCAAACTCACCAAAACAATATCAAACTACATCATCCC
TCAGCCACCCGCGGACGCAATGCCATTCCTATTGTAAACCCTGCAACGGGGGTCACCATGCCAAGTCCTTCTCCA
TCGGTGTCGCCCGGCATGCAACAGCATCTCGGCCGTCGGTGGTAA
Gene >OphauB2|2547
ATGGCCTCATACTATCATATGAATGCACAAGCGTCGTCACATGGCTCGCCCGTGTCGCACAATAACCACCACGGC
GGCGGTCGCAACCGCAGGGCCCCTCGTCTGTCTGTTTCTCACGGGCCTCAGCAAAGGCACCTCAAGGGTCCCCGC
AGTATAAAAGAATTCAACGAGCCTGTCCTTCTCTCCGCTTTTCGTCTCAAGTTTGAGGCTGGCCGATCCTTTGAC
CTCGAGGATGATATGGAATTTTGCCCAAATTTGCTTACTGAGTCGGACGTGAGTCATCAAGTCCTTGCCCCTCCC
CTTTGATGCTTGAAGCCACGTGTATTGATCGCTTGCGCTTTGCAGCTTGTTTCCATCTCCAGTGGCTCGGAACGT
TCGTCGCTTGCTAGCAATTCGCCCGAATCCTCTCCTACTCAGCAACCGCAGACAGTGGCTCCTGGCTTTTCGCTC
AATTCCACGTCCCCCGCCTTCATCCCGCCCAGCTACCAAACTCACCAAAACAATATCAAACTACATCATCCCTCA
GCCACCCGCGGACGCAATGCCATTCCTATTGTAAACCCTGCAACGGGGGTCACCATGCCAAGTCCTTCTCCATCG
GTGTCGCCCGGCATGCAACAGCATCTCGGCCGTCGGTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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