Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2486
Gene name
LocationContig_18:46474..47308
Strand-
Gene length (bp)834
Transcript length (bp)744
Coding sequence length (bp)744
Protein length (aa) 248

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04511 DER1 Der1-like family 5.0E-48 19 206

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8BNI4|DERL2_MOUSE Derlin-2 OS=Mus musculus GN=Derl2 PE=1 SV=2 12 216 3.0E-50
sp|Q5RC74|DERL2_PONAB Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1 12 216 4.0E-50
sp|Q9GZP9|DERL2_HUMAN Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1 12 216 4.0E-50
sp|Q96Q80|DERL3_HUMAN Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2 12 217 6.0E-46
sp|Q9D8K3|DERL3_MOUSE Derlin-3 OS=Mus musculus GN=Derl3 PE=1 SV=1 5 216 1.0E-44
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Swissprot ID Swissprot Description Start End E-value
sp|Q8BNI4|DERL2_MOUSE Derlin-2 OS=Mus musculus GN=Derl2 PE=1 SV=2 12 216 3.0E-50
sp|Q5RC74|DERL2_PONAB Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1 12 216 4.0E-50
sp|Q9GZP9|DERL2_HUMAN Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1 12 216 4.0E-50
sp|Q96Q80|DERL3_HUMAN Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2 12 217 6.0E-46
sp|Q9D8K3|DERL3_MOUSE Derlin-3 OS=Mus musculus GN=Derl3 PE=1 SV=1 5 216 1.0E-44
sp|Q4G2J3|DER22_MAIZE Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1 12 245 2.0E-44
sp|Q851X7|DERL2_ORYSJ Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1 12 245 2.0E-44
sp|Q9ZS88|DER22_ARATH Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1 12 215 2.0E-44
sp|Q4G2J4|DER21_MAIZE Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2 12 245 4.0E-44
sp|Q0P5E4|DERL3_BOVIN Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1 12 217 4.0E-44
sp|Q8VZ96|DER21_ARATH Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=3 12 230 3.0E-43
sp|Q54NN1|DERL2_DICDI Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1 11 217 4.0E-42
sp|Q21997|DERL2_CAEEL Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2 18 216 3.0E-36
sp|Q4G2J5|DER12_MAIZE Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1 15 239 2.0E-31
sp|Q4G2J6|DER11_MAIZE Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2 15 238 3.0E-30
sp|Q06397|DERL1_ORYSJ Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2 15 235 4.0E-27
sp|O94458|YFFH_SCHPO Uncharacterized derlin-like protein C1687.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1687.17c PE=3 SV=2 18 193 6.0E-27
sp|Q8VZU9|DERL1_ARATH Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1 18 229 4.0E-24
sp|Q9VQ57|DERL1_DROME Derlin-1 OS=Drosophila melanogaster GN=Der-1 PE=2 SV=1 5 214 2.0E-22
sp|Q9BUN8|DERL1_HUMAN Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1 15 196 3.0E-21
sp|Q5R9W3|DERL1_PONAB Derlin-1 OS=Pongo abelii GN=DERL1 PE=2 SV=1 15 196 5.0E-21
sp|Q71SS4|DERL1_BOVIN Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1 15 196 8.0E-21
sp|Q99J56|DERL1_MOUSE Derlin-1 OS=Mus musculus GN=Derl1 PE=1 SV=1 15 196 2.0E-20
sp|Q93561|DERL1_CAEEL Derlin-1 OS=Caenorhabditis elegans GN=cup-2 PE=2 SV=1 10 196 3.0E-18
sp|Q54IC9|DERL1_DICDI Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3 SV=1 5 216 4.0E-15
sp|Q9Y7Y0|YGR8_SCHPO Uncharacterized derlin-like protein C365.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC365.08c PE=3 SV=1 12 204 1.0E-14
sp|P38307|DER1_YEAST Degradation in the endoplasmic reticulum protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DER1 PE=1 SV=3 18 213 2.0E-13
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 30 0.5

Transmembrane Domains

Domain # Start End Length
1 25 47 22
2 62 84 22
3 104 126 22
4 146 168 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2486
MDQVMDGGRLPLEAWFWEMPLCTRWWTAATVLTSALVQCHMVTPFQLFYSFRAVFVKSQYWRLLTTFLYFGPFSL
DLLFHIYFLQRYARLLEEASGRSPAHFSWLLLYAMASLITLSPLVSMPFLGHPLSSTLVYIWSRRNPDTRLSFLG
LVVFTAPYLPWVLMAFSLFMHGTVPRDEIMGVIIGHVWYFFNDVYPPLHNDSRPLDPPAWWRRLFDGWVANASAD
AINNDVGAAAGGDFDPVPADVR*
Coding >OphauB2|2486
ATGGACCAAGTAATGGACGGCGGCCGCCTTCCGCTCGAGGCCTGGTTTTGGGAAATGCCACTCTGCACGCGCTGG
TGGACGGCGGCGACGGTGCTGACAAGTGCCCTTGTTCAGTGTCACATGGTTACTCCCTTTCAGCTCTTTTACAGC
TTTCGCGCCGTATTTGTCAAGTCGCAATATTGGCGCCTATTGACAACCTTTCTCTACTTTGGCCCGTTTTCTCTC
GACCTGCTCTTTCACATCTACTTTCTCCAGCGTTACGCTCGCCTTCTCGAAGAAGCATCGGGACGCTCGCCCGCC
CATTTCTCATGGCTCCTGTTATATGCCATGGCCAGTCTCATTACCCTATCTCCTCTTGTCTCGATGCCATTTCTT
GGCCACCCACTTTCTTCAACCCTCGTATATATATGGTCGCGCCGCAATCCCGACACAAGACTAAGCTTTCTCGGT
CTTGTCGTCTTTACGGCCCCTTACCTGCCTTGGGTCCTCATGGCTTTCAGCCTCTTCATGCATGGGACTGTCCCT
CGTGATGAAATCATGGGAGTCATTATCGGTCACGTTTGGTATTTTTTCAACGATGTTTATCCGCCTCTTCACAAT
GACTCGAGGCCACTGGATCCCCCAGCCTGGTGGAGACGCCTCTTTGATGGCTGGGTCGCCAACGCCTCGGCCGAC
GCGATCAACAACGATGTAGGTGCTGCTGCTGGCGGGGATTTCGACCCTGTGCCTGCCGATGTCAGATAG
Transcript >OphauB2|2486
ATGGACCAAGTAATGGACGGCGGCCGCCTTCCGCTCGAGGCCTGGTTTTGGGAAATGCCACTCTGCACGCGCTGG
TGGACGGCGGCGACGGTGCTGACAAGTGCCCTTGTTCAGTGTCACATGGTTACTCCCTTTCAGCTCTTTTACAGC
TTTCGCGCCGTATTTGTCAAGTCGCAATATTGGCGCCTATTGACAACCTTTCTCTACTTTGGCCCGTTTTCTCTC
GACCTGCTCTTTCACATCTACTTTCTCCAGCGTTACGCTCGCCTTCTCGAAGAAGCATCGGGACGCTCGCCCGCC
CATTTCTCATGGCTCCTGTTATATGCCATGGCCAGTCTCATTACCCTATCTCCTCTTGTCTCGATGCCATTTCTT
GGCCACCCACTTTCTTCAACCCTCGTATATATATGGTCGCGCCGCAATCCCGACACAAGACTAAGCTTTCTCGGT
CTTGTCGTCTTTACGGCCCCTTACCTGCCTTGGGTCCTCATGGCTTTCAGCCTCTTCATGCATGGGACTGTCCCT
CGTGATGAAATCATGGGAGTCATTATCGGTCACGTTTGGTATTTTTTCAACGATGTTTATCCGCCTCTTCACAAT
GACTCGAGGCCACTGGATCCCCCAGCCTGGTGGAGACGCCTCTTTGATGGCTGGGTCGCCAACGCCTCGGCCGAC
GCGATCAACAACGATGTAGGTGCTGCTGCTGGCGGGGATTTCGACCCTGTGCCTGCCGATGTCAGATAG
Gene >OphauB2|2486
ATGGACCAAGTAATGGACGGCGGCCGCCTTCCGCTCGAGGCCTGGTTTTGGGAAATGCCACTCTGCACGCGCTGG
TGGACGGCGGCGACGGTGCTGACAAGTGCCCTTGTTCAGTGTCACATGGTTACTCCCTTTCAGCTCTTTTACAGC
TTTCGCGCCGTATTTGTCAAGTCGCAAGTCAGTCAGCTGTGCCGTTATCCATTGTCGTTGTCGTCGGTTTCACAA
GGCCAACCGTTGCTAATCTGCTTATTATCCTTGGCCATATAGTATTGGCGCCTATTGACAACCTTTCTCTACTTT
GGCCCGTTTTCTCTCGACCTGCTCTTTCACATCTACTTTCTCCAGCGTTACGCTCGCCTTCTCGAAGAAGCATCG
GGACGCTCGCCCGCCCATTTCTCATGGCTCCTGTTATATGCCATGGCCAGTCTCATTACCCTATCTCCTCTTGTC
TCGATGCCATTTCTTGGCCACCCACTTTCTTCAACCCTCGTATATATATGGTCGCGCCGCAATCCCGACACAAGA
CTAAGCTTTCTCGGTCTTGTCGTCTTTACGGCCCCTTACCTGCCTTGGGTCCTCATGGCTTTCAGCCTCTTCATG
CATGGGACTGTCCCTCGTGATGAAATCATGGGAGTCATTATCGGTCACGTTTGGTATTTTTTCAACGATGTTTAT
CCGCCTCTTCACAATGACTCGAGGCCACTGGATCCCCCAGCCTGGTGGAGACGCCTCTTTGATGGCTGGGTCGCC
AACGCCTCGGCCGACGCGATCAACAACGATGTAGGTGCTGCTGCTGGCGGGGATTTCGACCCTGTGCCTGCCGAT
GTCAGATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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