Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2456
Gene name
LocationContig_179:1323..2409
Strand+
Gene length (bp)1086
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q00371|CAP22_COLGL Protein CAP22 OS=Colletotrichum gloeosporioides GN=CAP22 PE=2 SV=1 232 305 7.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2456
MRTPPPSLAVVSGLLAAGLAATTGLRPEDIPLQCVSMCGPMVELAAKCRPPSLPRRALVVDNGGGDAVLLERGLR
IIIAAPRKTGAEQTTTTTIVQPSRTSTAYPKLATRPFTSQTRLIPTPSAAPASSLPATTSLLASSTSLLVSTTSL
LASPPTLLPSASIPLAPDPAAPTTRRLRPQPISPPLDPSSPLDSTSQTRQTRDSTSLVTTTTAVVPTSLRTPSAA
PPKAPADGKADTTQLDAEEQCVCLNKSFDVPKVAALCASCIAQSGDDENNVNVIMSRCMFSPLEYSPGNESAVNN
VHVVAMLGSQRGVVNMGPGNKPISSSVALTIACVLAALLVAA*
Coding >OphauB2|2456
ATGAGGACGCCACCGCCGAGCCTGGCTGTCGTGTCGGGCCTGCTGGCGGCTGGTCTGGCTGCCACGACGGGGCTG
CGGCCAGAAGACATTCCGCTGCAATGCGTCTCAATGTGCGGGCCCATGGTTGAGCTGGCGGCCAAGTGTCGTCCG
CCCTCGTTGCCGCGCCGAGCACTCGTTGTCGACAATGGTGGCGGCGACGCAGTGCTGCTGGAGCGAGGCCTGAGA
ATCATTATTGCCGCTCCCAGAAAGACTGGTGCCGAGCAAACGACGACGACGACGATTGTCCAGCCATCGAGAACA
AGCACCGCCTATCCCAAGCTTGCCACGCGGCCCTTTACCAGCCAGACGCGCCTTATTCCCACTCCTTCTGCTGCT
CCAGCCTCTTCTCTTCCTGCCACGACTTCGTTGCTTGCCTCTAGCACCTCGCTGCTTGTCTCTACCACTTCGCTG
CTTGCATCGCCCCCCACTCTCTTGCCCTCTGCTTCGATTCCTCTGGCCCCCGATCCCGCAGCTCCCACGACGCGA
CGCCTCAGGCCTCAGCCCATTTCTCCGCCCCTTGACCCGTCTTCTCCTCTCGACTCCACGTCACAGACTAGGCAG
ACTAGAGACTCTACCAGCCTCGTCACAACAACAACAGCCGTGGTGCCAACGTCGTTGCGCACGCCCTCGGCTGCT
CCGCCCAAGGCTCCTGCAGACGGCAAGGCCGACACGACGCAGCTTGATGCCGAGGAGCAGTGCGTTTGCTTGAAC
AAGAGTTTTGACGTGCCCAAGGTGGCTGCGCTGTGCGCCAGCTGCATTGCCCAGTCTGGCGATGACGAGAATAAC
GTCAATGTCATCATGTCAAGATGCATGTTTTCTCCCCTCGAATACTCGCCCGGAAACGAAAGCGCCGTCAACAAT
GTACACGTTGTCGCCATGCTGGGCAGCCAAAGGGGCGTCGTCAACATGGGCCCGGGTAACAAGCCTATTAGCAGC
AGTGTCGCCTTGACTATTGCATGCGTATTGGCTGCTCTACTCGTGGCCGCATAG
Transcript >OphauB2|2456
ATGAGGACGCCACCGCCGAGCCTGGCTGTCGTGTCGGGCCTGCTGGCGGCTGGTCTGGCTGCCACGACGGGGCTG
CGGCCAGAAGACATTCCGCTGCAATGCGTCTCAATGTGCGGGCCCATGGTTGAGCTGGCGGCCAAGTGTCGTCCG
CCCTCGTTGCCGCGCCGAGCACTCGTTGTCGACAATGGTGGCGGCGACGCAGTGCTGCTGGAGCGAGGCCTGAGA
ATCATTATTGCCGCTCCCAGAAAGACTGGTGCCGAGCAAACGACGACGACGACGATTGTCCAGCCATCGAGAACA
AGCACCGCCTATCCCAAGCTTGCCACGCGGCCCTTTACCAGCCAGACGCGCCTTATTCCCACTCCTTCTGCTGCT
CCAGCCTCTTCTCTTCCTGCCACGACTTCGTTGCTTGCCTCTAGCACCTCGCTGCTTGTCTCTACCACTTCGCTG
CTTGCATCGCCCCCCACTCTCTTGCCCTCTGCTTCGATTCCTCTGGCCCCCGATCCCGCAGCTCCCACGACGCGA
CGCCTCAGGCCTCAGCCCATTTCTCCGCCCCTTGACCCGTCTTCTCCTCTCGACTCCACGTCACAGACTAGGCAG
ACTAGAGACTCTACCAGCCTCGTCACAACAACAACAGCCGTGGTGCCAACGTCGTTGCGCACGCCCTCGGCTGCT
CCGCCCAAGGCTCCTGCAGACGGCAAGGCCGACACGACGCAGCTTGATGCCGAGGAGCAGTGCGTTTGCTTGAAC
AAGAGTTTTGACGTGCCCAAGGTGGCTGCGCTGTGCGCCAGCTGCATTGCCCAGTCTGGCGATGACGAGAATAAC
GTCAATGTCATCATGTCAAGATGCATGTTTTCTCCCCTCGAATACTCGCCCGGAAACGAAAGCGCCGTCAACAAT
GTACACGTTGTCGCCATGCTGGGCAGCCAAAGGGGCGTCGTCAACATGGGCCCGGGTAACAAGCCTATTAGCAGC
AGTGTCGCCTTGACTATTGCATGCGTATTGGCTGCTCTACTCGTGGCCGCATAG
Gene >OphauB2|2456
ATGAGGACGCCACCGCCGAGCCTGGCTGTCGTGTCGGGCCTGCTGGCGGCTGGTCTGGCTGCCACGACGGGGCTG
CGGCCAGAAGACATTCCGCTGCAATGCGTCTCAATGTGCGGGCCCATGGTTGAGCTGGCGGCCAAGTGTCGTCCG
CCCTCGTTGCCGCGCCGAGCACTCGTTGTCGACAATGGTGGCGGCGACGCAGTGCTGCTGGAGCGAGGCCTGAGA
ATCATTATTGCCGCTCCCAGAAAGACTGGTGCCGAGCAAACGACGACGACGACGATTGTCCAGCCATCGAGAACA
AGCACCGCCTATCCCAAGCTTGCCACGCGGCCCTTTACCAGCCAGACGCGCCTTATTCCCACTCCTTCTGCTGCT
CCAGCCTCTTCTCTTCCTGCCACGACTTCGTTGCTTGCCTCTAGCACCTCGCTGCTTGTCTCTACCACTTCGCTG
CTTGCATCGCCCCCCACTCTCTTGCCCTCTGCTTCGATTCCTCTGGCCCCCGATCCCGCAGCTCCCACGACGCGA
CGCCTCAGGCCTCAGCCCATTTCTCCGCCCCTTGACCCGTCTTCTCCTCTCGACTCCACGTCACAGACTAGGCAG
ACTAGAGACTCTACCAGCCTCGTCACAACAACAACAGCCGTGGTGCCAACGTCGTTGCGCACGCCCTCGGCTGCT
CCGCCCAAGGCTCCTGCAGACGGCAAGGCCGACACGACGCAGCTTGATGCCGAGGAGCAGTGCGTTTGCTTGAAC
AAGAGTTTTGACGTGCCCAAGGTGGCTGCGCTGTGCGCCAGCTGCATTGCCCAGTCTGGCGATGACGAGAATAGT
AAGTGGCTTGGTCCTTTCTTTGTCACTCTGCTTAATAGCCAACACGCCGCCACAGACGTCAATGTCATCATGTCA
AGATGCATGTTTTCTCCCCTCGAATACTCGCCCGGAAACGAAAGCGCCGTCAACAATGTACACGTTGTCGCCATG
CTGGGCAGCCAAAGGGGCGTCGTCAACATGGGCCCGGGTAACAAGCCTATTAGCAGCAGTGTCGCCTTGACTATT
GCATGCGTATTGGCTGCTCTACTCGTGGCCGCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail