© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2419 |
| Gene name | |
| Location | Contig_176:18191..19887 |
| Strand | - |
| Gene length (bp) | 1696 |
| Transcript length (bp) | 1431 |
| Coding sequence length (bp) | 1431 |
| Protein length (aa) | 477 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-21 | 39 | 374 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.8E-06 | 86 | 219 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 26 | 415 | 4.0E-54 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 30 | 406 | 5.0E-53 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 30 | 406 | 5.0E-53 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 30 | 406 | 3.0E-51 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 21 | 410 | 2.0E-37 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 26 | 415 | 4.0E-54 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 30 | 406 | 5.0E-53 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 30 | 406 | 5.0E-53 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 30 | 406 | 3.0E-51 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 21 | 410 | 2.0E-37 |
| sp|Q9ZK41|GLUP_HELPJ | Putative glucose/galactose transporter OS=Helicobacter pylori (strain J99 / ATCC 700824) GN=gluP PE=3 SV=1 | 35 | 395 | 1.0E-35 |
| sp|O25788|GLUP_HELPY | Putative glucose/galactose transporter OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=gluP PE=3 SV=1 | 35 | 395 | 3.0E-34 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0005575 | cellular_component | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 29 | 48 | 19 |
| 2 | 68 | 90 | 22 |
| 3 | 97 | 116 | 19 |
| 4 | 121 | 143 | 22 |
| 5 | 164 | 186 | 22 |
| 6 | 196 | 218 | 22 |
| 7 | 247 | 269 | 22 |
| 8 | 284 | 306 | 22 |
| 9 | 313 | 332 | 19 |
| 10 | 336 | 358 | 22 |
| 11 | 370 | 392 | 22 |
| 12 | 402 | 424 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2419 MAMRLTGVFKRGSHDKAIPAARLTLRESIFPIALVTVLFFLWGFSYGLLDTLNKHFQDVLKIDRARSAGLQAAYF GAYPLASIGHAAWLLRHYGYRVVFIWGLCLYALGALLAIAALKNKSFGGFCACIFIIGNGLGSLETAANPFITVC GPPKYAELRLNFSQAFNGIGSVIAPVLGSYVFFNFSDNKALDNVQWVYLSIAVFVLILACAFFFANIPEVTDEDM ETQAQETGDMGNTKPFRKQYRLFHAAFAQFCYTGAQVAIASFFINYAMGTRPNTDASLGAKFFAGAQAAFAIGRF FGSALIKYMRPRHVFLAFLTCCIIFIGPAITQRGNIGISMLYIVLFFESICFPSIVALGMRGLGRHTKRGSGLII GGVIGGACAPPLTGVAGDHLGDGKAMVVPMIFFVVAWSYALCVNFVPAYSRVLDSYNDRPAGLRGQSQDDIEGVT SEASGLSEKHLGQSLQTAQNKVPVAS* |
| Coding | >OphauB2|2419 ATGGCCATGAGGCTCACCGGCGTCTTCAAACGTGGCTCTCATGACAAGGCGATCCCTGCCGCCAGACTGACGCTG CGCGAATCCATCTTCCCCATTGCCCTCGTCACCGTCCTCTTCTTTCTCTGGGGCTTCAGCTACGGCCTGCTCGAC ACGCTCAACAAGCACTTTCAAGACGTGCTCAAGATTGACCGCGCTCGCTCAGCCGGCCTACAGGCTGCCTATTTT GGCGCATACCCCCTGGCCTCAATTGGTCACGCTGCCTGGCTTCTTCGCCATTACGGCTACCGCGTCGTCTTCATC TGGGGACTCTGTCTCTACGCCCTTGGCGCTCTGCTTGCCATTGCGGCTCTCAAGAACAAGAGCTTTGGTGGCTTC TGCGCCTGCATCTTCATCATCGGCAACGGACTGGGCTCTCTTGAGACGGCGGCAAACCCCTTCATTACAGTCTGC GGCCCTCCCAAGTACGCCGAGCTGCGCCTCAACTTCTCCCAGGCCTTTAATGGCATTGGCTCCGTGATTGCGCCT GTGCTTGGCTCCTACGTCTTCTTCAACTTTAGCGACAACAAGGCTCTGGACAATGTGCAATGGGTCTATCTCTCC ATTGCCGTCTTTGTCCTCATCCTGGCCTGCGCCTTCTTCTTTGCCAACATTCCCGAGGTGACGGATGAGGACATG GAGACTCAGGCCCAGGAAACGGGCGACATGGGCAACACAAAGCCCTTTCGCAAGCAGTACCGCCTCTTCCACGCC GCATTTGCCCAGTTTTGCTACACTGGCGCCCAGGTGGCAATTGCCAGCTTCTTCATCAACTACGCCATGGGCACG CGGCCCAACACCGACGCCTCGCTCGGAGCCAAATTTTTTGCCGGCGCTCAGGCCGCCTTTGCCATTGGCCGCTTC TTTGGCTCTGCCCTCATCAAGTACATGCGGCCGCGACACGTCTTCCTCGCCTTCTTGACCTGCTGCATCATCTTC ATTGGTCCGGCCATAACGCAACGCGGCAACATTGGCATCTCAATGCTCTACATCGTGCTCTTTTTTGAGTCCATT TGCTTCCCGTCCATTGTTGCTCTGGGCATGCGCGGCCTGGGACGACACACCAAGCGCGGCAGCGGCCTCATTATT GGCGGCGTCATTGGCGGTGCCTGTGCTCCCCCACTGACGGGCGTGGCTGGCGATCATTTGGGCGACGGCAAAGCC ATGGTGGTGCCCATGATCTTCTTCGTCGTTGCATGGTCATATGCCTTGTGCGTCAACTTTGTCCCGGCCTACTCT CGTGTTCTCGACTCGTACAATGACAGGCCAGCCGGCCTGCGCGGCCAGAGCCAAGACGATATCGAGGGCGTCACC AGCGAAGCCTCTGGTCTGTCAGAAAAGCATCTCGGCCAGTCGTTGCAGACAGCCCAAAACAAAGTGCCTGTTGCA TCATGA |
| Transcript | >OphauB2|2419 ATGGCCATGAGGCTCACCGGCGTCTTCAAACGTGGCTCTCATGACAAGGCGATCCCTGCCGCCAGACTGACGCTG CGCGAATCCATCTTCCCCATTGCCCTCGTCACCGTCCTCTTCTTTCTCTGGGGCTTCAGCTACGGCCTGCTCGAC ACGCTCAACAAGCACTTTCAAGACGTGCTCAAGATTGACCGCGCTCGCTCAGCCGGCCTACAGGCTGCCTATTTT GGCGCATACCCCCTGGCCTCAATTGGTCACGCTGCCTGGCTTCTTCGCCATTACGGCTACCGCGTCGTCTTCATC TGGGGACTCTGTCTCTACGCCCTTGGCGCTCTGCTTGCCATTGCGGCTCTCAAGAACAAGAGCTTTGGTGGCTTC TGCGCCTGCATCTTCATCATCGGCAACGGACTGGGCTCTCTTGAGACGGCGGCAAACCCCTTCATTACAGTCTGC GGCCCTCCCAAGTACGCCGAGCTGCGCCTCAACTTCTCCCAGGCCTTTAATGGCATTGGCTCCGTGATTGCGCCT GTGCTTGGCTCCTACGTCTTCTTCAACTTTAGCGACAACAAGGCTCTGGACAATGTGCAATGGGTCTATCTCTCC ATTGCCGTCTTTGTCCTCATCCTGGCCTGCGCCTTCTTCTTTGCCAACATTCCCGAGGTGACGGATGAGGACATG GAGACTCAGGCCCAGGAAACGGGCGACATGGGCAACACAAAGCCCTTTCGCAAGCAGTACCGCCTCTTCCACGCC GCATTTGCCCAGTTTTGCTACACTGGCGCCCAGGTGGCAATTGCCAGCTTCTTCATCAACTACGCCATGGGCACG CGGCCCAACACCGACGCCTCGCTCGGAGCCAAATTTTTTGCCGGCGCTCAGGCCGCCTTTGCCATTGGCCGCTTC TTTGGCTCTGCCCTCATCAAGTACATGCGGCCGCGACACGTCTTCCTCGCCTTCTTGACCTGCTGCATCATCTTC ATTGGTCCGGCCATAACGCAACGCGGCAACATTGGCATCTCAATGCTCTACATCGTGCTCTTTTTTGAGTCCATT TGCTTCCCGTCCATTGTTGCTCTGGGCATGCGCGGCCTGGGACGACACACCAAGCGCGGCAGCGGCCTCATTATT GGCGGCGTCATTGGCGGTGCCTGTGCTCCCCCACTGACGGGCGTGGCTGGCGATCATTTGGGCGACGGCAAAGCC ATGGTGGTGCCCATGATCTTCTTCGTCGTTGCATGGTCATATGCCTTGTGCGTCAACTTTGTCCCGGCCTACTCT CGTGTTCTCGACTCGTACAATGACAGGCCAGCCGGCCTGCGCGGCCAGAGCCAAGACGATATCGAGGGCGTCACC AGCGAAGCCTCTGGTCTGTCAGAAAAGCATCTCGGCCAGTCGTTGCAGACAGCCCAAAACAAAGTGCCTGTTGCA TCATGA |
| Gene | >OphauB2|2419 ATGGCCATGAGGCTCACCGGCGTCTTCAAACGTGGCTCTCATGACAAGGCGATCCCTGCCGCCAGACTGACGCTG CGCGAATCCATCTTCCCCATTGCCCTCGTCACCGTCCTCTTCTTTCTCTGGGGCTTCAGCTACGGCCTGCTCGAC ACGCTCAACAAGCACTTTCAAGACGTGCTCAAGATTGACCGCGCTCGCTCAGCCGGCCTACAGGCTGCCTATTTT GGGTCCGTCCCGCCAGACCTTGTTTTTGTTTTTGTTTACTTCATCTTGTTGGCTTGCCTTTCCTGGCCTCTTCCT GGCCTCGCCCTCTTCACCTTGTGCACCTTGATGTCTAACGCGCTCTCATTTCCATGGCTGTAGCGCATACCCCCT GGCCTCAATTGGTCACGCTGCCTGGCTTCTTCGCCATTACGGCTACCGCGTCGTCTTCATCTGGGGACTCTGTCT CTACGCCCTTGGCGCTCTGCTTGCCATTGCGGCTCTCAAGAACAAGAGCTTTGGTGGCTTCTGCGCCTGCATCTT CATCATCGGCAACGGACTGGGCTCTCTTGAGACGGCGGCAAACCCCTTCATTACAGGTGCGTCTGTTGCAGCAAC TTGACCCTTTGCCAGGAGCGACTGCTTAGTCTCGACCAGTCTGCGGCCCTCCCAAGTACGCCGAGCTGCGCCTCA ACTTCTCCCAGGCCTTTAATGGCATTGGCTCCGTGATTGCGCCTGTGCTTGGCTCCTACGTCTTCTTCAACTTTA GCGACAACAAGGCTCTGGACAATGTGCAATGGGTCTATCTCTCCATTGCCGTCTTTGTCCTCATCCTGGCCTGCG CCTTCTTCTTTGCCAACATTCCCGAGGTGACGGATGAGGGTGAGTAGAGAGCCCCTCTTGAGCCAGTCTCGTAGT CCCCGAGCCAGCTAACGTTGGCCCTTGTTATCAAGACATGGAGACTCAGGCCCAGGAAACGGGCGACATGGGCAA CACAAAGCCCTTTCGCAAGCAGTACCGCCTCTTCCACGCCGCATTTGCCCAGTTTTGCTACACTGGCGCCCAGGT GGCAATTGCCAGCTTCTTCATCAACTACGCCATGGGCACGCGGCCCAACACCGACGCCTCGCTCGGAGCCAAATT TTTTGCCGGCGCTCAGGCCGCCTTTGCCATTGGCCGCTTCTTTGGCTCTGCCCTCATCAAGTACATGCGGCCGCG ACACGTCTTCCTCGCCTTCTTGACCTGCTGCATCATCTTCATTGGTCCGGCCATAACGCAACGCGGCAACATTGG CATCTCAATGCTCTACATCGTGCTCTTTTTTGAGTCCATTTGCTTCCCGTCCATTGTTGCTCTGGGCATGCGCGG CCTGGGACGACACACCAAGCGCGGCAGCGGCCTCATTATTGGCGGCGTCATTGGCGGTGCCTGTGCTCCCCCACT GACGGGCGTGGCTGGCGATCATTTGGGCGACGGCAAAGCCATGGTGGTGCCCATGATCTTCTTCGTCGTTGCATG GTCATATGCCTTGTGCGTCAACTTTGTCCCGGCCTACTCTCGTGTTCTCGACTCGTACAATGACAGGCCAGCCGG CCTGCGCGGCCAGAGCCAAGACGATATCGAGGGCGTCACCAGCGAAGCCTCTGGTCTGTCAGAAAAGCATCTCGG CCAGTCGTTGCAGACAGCCCAAAACAAAGTGCCTGTTGCATCATGA |