Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|24
Gene name
LocationContig_1:61335..62519
Strand+
Gene length (bp)1184
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12955 DUF3844 Domain of unknown function (DUF3844) 3.0E-35 272 370

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O74728|YH93_SCHPO Uncharacterized endoplasmic reticulum membrane protein C1709.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1709.03 PE=3 SV=2 210 368 8.0E-17

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 335 357 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|24
MKLCAGLSAAFAGLVAAAQNADVYIVPAPDVSTSASAPTRLSPSMARLVLLQRLSPGGRGPYISDFPKDTDLEQI
VSIVSRFGKAPPPLFARSGTHDSSQLVVMLEEMSVAQMDEAARAFKTQPTFSIPNPPGGQAHDDLIKTDLRSLGV
VNGNECSMAQAFNPLDECWSGKQAAVVRYKVDKDPDTLSHVLRRLPQLSQLGKAGEMETTFVLLPSTSRASSWSD
QPSELRRRQAAERVMASPDKSAQPVAPASSGLDKTLLMASGSRVASCFTSQEGCVTATGNCSGHGTCLNKYPKEE
NSCFACHCLSTRTKSGSLTHWAGATCSKRDVSMAFWLFAGFTVALVSVLWMAIYMLFDVGQEKLPGVIGAGVSRS
K*
Coding >OphauB2|24
ATGAAGCTGTGTGCCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAACGCCGACGTCTATATT
GTGCCTGCGCCAGATGTCTCGACTTCGGCCTCAGCCCCAACGCGGCTGTCACCCAGCATGGCGCGTCTGGTGCTG
CTTCAACGCCTATCTCCTGGTGGGCGAGGACCGTACATCAGCGATTTCCCCAAAGACACCGACTTGGAGCAGATT
GTGTCGATTGTCAGCCGATTCGGCAAAGCACCACCGCCCCTGTTTGCTCGCAGTGGTACGCACGACTCGAGCCAG
CTTGTGGTGATGCTTGAAGAAATGTCGGTTGCACAAATGGACGAGGCGGCGCGGGCGTTCAAGACTCAACCCACA
TTTTCAATTCCAAACCCGCCAGGGGGACAAGCCCACGATGATCTCATCAAGACGGATCTGCGCAGCCTTGGAGTT
GTCAATGGCAACGAGTGCAGCATGGCGCAGGCCTTCAACCCGCTGGATGAGTGCTGGAGCGGGAAACAGGCTGCT
GTTGTTCGCTACAAAGTTGACAAGGACCCGGACACGCTCAGCCATGTTTTGCGCAGACTCCCCCAGCTCTCGCAG
CTTGGCAAAGCCGGTGAAATGGAGACTACCTTTGTGCTTCTGCCCTCGACAAGCCGCGCATCGTCATGGTCCGAC
CAACCGTCAGAGCTGCGCCGTCGCCAAGCAGCCGAGCGAGTCATGGCTTCCCCAGACAAGTCTGCGCAGCCCGTA
GCCCCGGCTTCTTCAGGCTTGGACAAGACCTTGTTGATGGCATCTGGATCTCGCGTGGCATCGTGCTTTACAAGC
CAAGAAGGCTGCGTTACAGCTACGGGAAATTGCTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAAGGAGGAA
AACAGCTGCTTCGCCTGTCATTGCCTTAGCACTCGGACCAAATCCGGCAGTCTAACGCACTGGGCCGGGGCGACA
TGCTCCAAGAGGGACGTAAGCATGGCTTTTTGGTTGTTCGCTGGCTTTACCGTGGCCCTTGTCAGCGTGCTGTGG
ATGGCCATCTACATGCTCTTTGACGTGGGACAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTGTCGCGGTCC
AAGTAG
Transcript >OphauB2|24
ATGAAGCTGTGTGCCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAACGCCGACGTCTATATT
GTGCCTGCGCCAGATGTCTCGACTTCGGCCTCAGCCCCAACGCGGCTGTCACCCAGCATGGCGCGTCTGGTGCTG
CTTCAACGCCTATCTCCTGGTGGGCGAGGACCGTACATCAGCGATTTCCCCAAAGACACCGACTTGGAGCAGATT
GTGTCGATTGTCAGCCGATTCGGCAAAGCACCACCGCCCCTGTTTGCTCGCAGTGGTACGCACGACTCGAGCCAG
CTTGTGGTGATGCTTGAAGAAATGTCGGTTGCACAAATGGACGAGGCGGCGCGGGCGTTCAAGACTCAACCCACA
TTTTCAATTCCAAACCCGCCAGGGGGACAAGCCCACGATGATCTCATCAAGACGGATCTGCGCAGCCTTGGAGTT
GTCAATGGCAACGAGTGCAGCATGGCGCAGGCCTTCAACCCGCTGGATGAGTGCTGGAGCGGGAAACAGGCTGCT
GTTGTTCGCTACAAAGTTGACAAGGACCCGGACACGCTCAGCCATGTTTTGCGCAGACTCCCCCAGCTCTCGCAG
CTTGGCAAAGCCGGTGAAATGGAGACTACCTTTGTGCTTCTGCCCTCGACAAGCCGCGCATCGTCATGGTCCGAC
CAACCGTCAGAGCTGCGCCGTCGCCAAGCAGCCGAGCGAGTCATGGCTTCCCCAGACAAGTCTGCGCAGCCCGTA
GCCCCGGCTTCTTCAGGCTTGGACAAGACCTTGTTGATGGCATCTGGATCTCGCGTGGCATCGTGCTTTACAAGC
CAAGAAGGCTGCGTTACAGCTACGGGAAATTGCTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAAGGAGGAA
AACAGCTGCTTCGCCTGTCATTGCCTTAGCACTCGGACCAAATCCGGCAGTCTAACGCACTGGGCCGGGGCGACA
TGCTCCAAGAGGGACGTAAGCATGGCTTTTTGGTTGTTCGCTGGCTTTACCGTGGCCCTTGTCAGCGTGCTGTGG
ATGGCCATCTACATGCTCTTTGACGTGGGACAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTGTCGCGGTCC
AAGTAG
Gene >OphauB2|24
ATGAAGCTGTGTGCCGGGCTTTCTGCGGCTTTTGCCGGGCTCGTGGCAGCTGCTCAAAACGCCGACGTCTATATT
GTGCCTGCGCCAGATGTCTCGACTTCGGCCTCAGCCCCAACGCGGCTGTCACCCAGCATGGCGCGTCTGGTGCTG
CTTCAACGCCTATCTCCTGGTGGGCGAGGACCGTACATCAGCGATTTCCCCAAAGACACCGACTTGGAGCAGATT
GTGTCGATTGTCAGCCGATTCGGCAAAGCACCACCGCCCCTGTTTGCTCGCAGTGGTACGCACGACTCGAGCCAG
CTTGTGGTGATGCTTGAAGAAATGTCGGTTGCACAAATGGACGAGGCGGCGCGGGCGTTCAAGACTCAACCCACA
TTTTCAATTCCAAACCCGCCAGGGGGACAAGCCCACGATGATCTCATCAAGACGGATCTGCGCAGCCTTGGAGTT
GTCAATGGCAACGAGTGCAGCATGGCGCAGGCCTTCAACCCGCTGGATGAGTGCTGGAGCGGGAAACAGGCTGCT
GTTGTTCGCTACAAAGTTGACAAGGTGATGACTTTGTGCACGAGGCCATGTAGTACGGCAGCTAACGCCTGCAGC
AGGACCCGGACACGCTCAGCCATGTTTTGCGCAGACTCCCCCAGCTCTCGCAGCTTGGCAAAGCCGGTGAAATGG
AGACTACCTTTGTGCTTCTGCCCTCGACAAGCCGCGCATCGTCATGGTCCGACCAACCGTCAGAGCTGCGCCGTC
GCCAAGCAGCCGAGCGAGTCATGGCTTCCCCAGACAAGTCTGCGCAGCCCGTAGCCCCGGCTTCTTCAGGCTTGG
ACAAGACCTTGTTGATGGCATCTGGATCTCGCGTGGCATCGTGCTTTACAAGCCAAGAAGGCTGCGTTACAGCTA
CGGGAAATTGCTCGGGGCACGGAACGTGTCTGAATAAGTATCCCAAGGAGGAAAACAGCTGCTTCGCCTGTCATT
GCCTTAGCACTCGGACCAAATCCGGCAGTCTAACGCACTGGGCCGGGGCGACATGCTCCAAGAGGGACGTAAGCA
TGGCTTTTTGGTTGTTCGCTGGCTTTACCGTGGCCCTTGTCAGCGTGCTGTGGATGGCCATCTACATGCTCTTTG
ACGTGGGACAGGAGAAGCTACCAGGCGTGATTGGAGCAGGGGTGTCGCGGTCCAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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