Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|230
Gene name
LocationContig_10:174303..175602
Strand-
Gene length (bp)1299
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01522 Polysacc_deac_1 Polysaccharide deacetylase 9.3E-26 105 244

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 70 328 6.0E-31
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 96 326 1.0E-25
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 103 315 6.0E-14
sp|O34798|PDAC_BACSU Peptidoglycan-N-acetylmuramic acid deacetylase PdaC OS=Bacillus subtilis (strain 168) GN=pdaC PE=1 SV=1 110 231 3.0E-10
sp|Q8DP63|PGDA_STRR6 Peptidoglycan-N-acetylglucosamine deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pgdA PE=1 SV=1 110 318 4.0E-09
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Swissprot ID Swissprot Description Start End E-value
sp|D4AM78|CDA_ARTBC Chitin deacetylase ARB_04768 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04768 PE=3 SV=1 70 328 6.0E-31
sp|D4B5F9|PGDA_ARTBC Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03699 PE=1 SV=2 96 326 1.0E-25
sp|P83513|XY11A_PSEXY Bifunctional xylanase/deacetylase OS=Pseudobutyrivibrio xylanivorans GN=xyn11A PE=1 SV=2 103 315 6.0E-14
sp|O34798|PDAC_BACSU Peptidoglycan-N-acetylmuramic acid deacetylase PdaC OS=Bacillus subtilis (strain 168) GN=pdaC PE=1 SV=1 110 231 3.0E-10
sp|Q8DP63|PGDA_STRR6 Peptidoglycan-N-acetylglucosamine deacetylase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pgdA PE=1 SV=1 110 318 4.0E-09
sp|P02963|NODB_RHIME Chitooligosaccharide deacetylase OS=Rhizobium meliloti (strain 1021) GN=nodB PE=3 SV=3 111 228 9.0E-09
sp|O07596|YHEN_BACSU Putative polysaccharide deacetylase YheN OS=Bacillus subtilis (strain 168) GN=yheN PE=3 SV=1 92 181 1.0E-08
sp|P54865|XYND_CELFI Bifunctional xylanase/deacetylase OS=Cellulomonas fimi GN=xynD PE=1 SV=1 104 246 3.0E-08
sp|P50325|CDA_AMYRO Chitin deacetylase OS=Amylomyces rouxii PE=1 SV=1 100 270 6.0E-08
sp|P04676|NODB_RHILT Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. trifolii GN=nodB PE=3 SV=1 111 188 7.0E-08
sp|Q04729|YFUM2_GEOSE Uncharacterized 30.6 kDa protein in fumA 3'region OS=Geobacillus stearothermophilus PE=3 SV=1 111 186 1.0E-07
sp|P04675|NODB_BRASP Chitooligosaccharide deacetylase OS=Bradyrhizobium sp. (strain ANU 289) GN=nodB PE=3 SV=2 111 306 3.0E-07
sp|Q59674|XY11A_CELJA Bifunctional xylanase/xylan deacetylase OS=Cellvibrio japonicus GN=xyn11A PE=1 SV=1 109 246 6.0E-07
sp|P50352|NODB_BRAEL Chitooligosaccharide deacetylase OS=Bradyrhizobium elkanii GN=nodB PE=3 SV=1 111 182 2.0E-06
sp|P04339|NODB_RHILV Chitooligosaccharide deacetylase OS=Rhizobium leguminosarum bv. viciae GN=nodB PE=3 SV=1 111 182 4.0E-06
sp|P50355|NODB_RHISN Chitooligosaccharide deacetylase OS=Rhizobium sp. (strain NGR234) GN=nodB PE=3 SV=2 111 184 5.0E-06
sp|O34928|PDAA_BACSU Peptidoglycan-N-acetylmuramic acid deacetylase PdaA OS=Bacillus subtilis (strain 168) GN=pdaA PE=1 SV=1 107 194 9.0E-06
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GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Yes
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0003674 molecular_function No
GO:0016787 hydrolase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|230
MKATICLVALAAPVAATIPPTNLLDTFNLSNYDTIGDAASSYIVHRKTRKPFRCSFISTARLYHFCQVKFSRACD
QFVGPKGKYTKNIPRPLNSKVRYGDRLTQCHKPGMIALTFDDGPHHQTARLLDILKKYNVKATFFISGNNRRKGF
IDDPETPWPEVLHRMHREGHQLASHGWTHRNIFALTWEWDYDRVHDGPGMRENQIVYNEMAFRNIFGWVPTYFRA
PFNACHRPCQKFLASMGYHLIGRTNTLKDQNESVRKSLERIRLSFRSRWHSRHSIIIQSSDVQWKSVEHMTPKII
RRGRELGWYFVTIGECMNDPKENWYRQAAFLDDLNPWNATSASRSGVPLFYNSSMSWNATSASRSDVSLLANSP*
Coding >OphauB2|230
ATGAAGGCAACAATCTGCCTCGTCGCTCTCGCCGCACCAGTCGCCGCCACGATTCCCCCCACCAATCTCCTCGAT
ACCTTTAACCTCAGCAATTACGACACAATCGGCGACGCAGCAAGCTCCTACATTGTGCACCGCAAGACGAGAAAG
CCGTTTCGTTGCTCCTTTATTTCTACGGCTCGTCTATATCACTTTTGCCAGGTCAAGTTTAGCAGGGCGTGTGAT
CAATTCGTCGGCCCCAAGGGCAAATATACCAAGAATATTCCTCGCCCGCTGAATAGCAAAGTCCGCTATGGAGAC
CGCCTGACGCAATGCCACAAACCTGGCATGATTGCTCTCACATTCGACGACGGCCCCCACCACCAAACAGCCCGA
CTCCTCGACATTCTCAAAAAATACAACGTCAAGGCCACCTTTTTCATCAGCGGCAACAACCGCCGCAAGGGCTTC
ATCGACGACCCCGAAACCCCTTGGCCCGAGGTCCTTCACCGCATGCACCGCGAAGGCCACCAGCTCGCCAGCCAC
GGCTGGACCCATCGCAACATCTTTGCCCTAACCTGGGAATGGGACTATGACAGAGTCCACGACGGACCCGGCATG
CGCGAAAACCAAATCGTCTACAACGAAATGGCCTTTCGCAACATTTTTGGCTGGGTGCCTACTTACTTTCGCGCG
CCATTCAACGCCTGCCATAGACCGTGTCAAAAGTTTCTCGCTAGTATGGGCTATCACCTCATTGGGCGGACAAAC
ACGCTCAAGGATCAAAACGAGAGTGTGAGAAAGTCTTTGGAGCGGATCCGGCTGTCGTTTCGCTCGCGGTGGCAT
TCGCGCCATAGCATCATTATCCAGAGCAGTGATGTGCAGTGGAAGTCGGTTGAGCACATGACGCCTAAGATTATT
CGGAGGGGGAGAGAACTGGGATGGTACTTTGTCACGATTGGCGAGTGCATGAATGATCCCAAGGAGAATTGGTAT
CGTCAGGCCGCGTTTCTGGACGATTTGAATCCTTGGAACGCCACGTCTGCGAGTAGATCGGGTGTTCCGCTCTTT
TACAACTCTTCCATGAGTTGGAATGCCACGTCTGCGAGTAGATCGGATGTTTCGCTCTTGGCCAACTCTCCATGA
Transcript >OphauB2|230
ATGAAGGCAACAATCTGCCTCGTCGCTCTCGCCGCACCAGTCGCCGCCACGATTCCCCCCACCAATCTCCTCGAT
ACCTTTAACCTCAGCAATTACGACACAATCGGCGACGCAGCAAGCTCCTACATTGTGCACCGCAAGACGAGAAAG
CCGTTTCGTTGCTCCTTTATTTCTACGGCTCGTCTATATCACTTTTGCCAGGTCAAGTTTAGCAGGGCGTGTGAT
CAATTCGTCGGCCCCAAGGGCAAATATACCAAGAATATTCCTCGCCCGCTGAATAGCAAAGTCCGCTATGGAGAC
CGCCTGACGCAATGCCACAAACCTGGCATGATTGCTCTCACATTCGACGACGGCCCCCACCACCAAACAGCCCGA
CTCCTCGACATTCTCAAAAAATACAACGTCAAGGCCACCTTTTTCATCAGCGGCAACAACCGCCGCAAGGGCTTC
ATCGACGACCCCGAAACCCCTTGGCCCGAGGTCCTTCACCGCATGCACCGCGAAGGCCACCAGCTCGCCAGCCAC
GGCTGGACCCATCGCAACATCTTTGCCCTAACCTGGGAATGGGACTATGACAGAGTCCACGACGGACCCGGCATG
CGCGAAAACCAAATCGTCTACAACGAAATGGCCTTTCGCAACATTTTTGGCTGGGTGCCTACTTACTTTCGCGCG
CCATTCAACGCCTGCCATAGACCGTGTCAAAAGTTTCTCGCTAGTATGGGCTATCACCTCATTGGGCGGACAAAC
ACGCTCAAGGATCAAAACGAGAGTGTGAGAAAGTCTTTGGAGCGGATCCGGCTGTCGTTTCGCTCGCGGTGGCAT
TCGCGCCATAGCATCATTATCCAGAGCAGTGATGTGCAGTGGAAGTCGGTTGAGCACATGACGCCTAAGATTATT
CGGAGGGGGAGAGAACTGGGATGGTACTTTGTCACGATTGGCGAGTGCATGAATGATCCCAAGGAGAATTGGTAT
CGTCAGGCCGCGTTTCTGGACGATTTGAATCCTTGGAACGCCACGTCTGCGAGTAGATCGGGTGTTCCGCTCTTT
TACAACTCTTCCATGAGTTGGAATGCCACGTCTGCGAGTAGATCGGATGTTTCGCTCTTGGCCAACTCTCCATGA
Gene >OphauB2|230
ATGAAGGCAACAATCTGCCTCGTCGCTCTCGCCGCACCAGTCGCCGCCACGATTCCCCCCACCAATCTCCTCGAT
ACCTTTAACCTCAGCAATTACGACACAATCGGCGACGCAGCAAGCTCCTACATTGTGCACCGCAAGACGAGAAAG
CCGTTTCGTTGCTCCTTTATTTCTACGGCTCGTCTATGTCCAGAGGGATTCTGCTGCAACTATGTTTGGGATAGA
TGTGGCAAGGGGCTAAAGTATTGCTCAGATCACTTTTGCCAGGTCAAGTTTAGCAGGGCGTGTGATCAATTGTAA
GTCTAAAGCCAAGATTTGGGGCAAAAGATTCTAATCCGTATAGCGTCGGCCCCAAGGGCAAATATACCAAGAATA
TTCCTCGCCCGCTGAATAGCAAAGTCCGCTATGGTTCGTGCCCCCTCCATCTCATAAACTTGTAAACCCATTCAT
TACCAACTCTTCGCACTAGGAGACCGCCTGACGCAATGCCACAAACCTGGCATGATTGCTCTCACATTCGACGAC
GGCCCCCACCACCAAACAGCCCGACTCCTCGACATTCTCAAAAAATACAACGTCAAGGCCACCTTTTTCATCAGC
GGCAACAACCGCCGCAAGGGCTTCATCGACGACCCCGAAACCCCTTGGCCCGAGGTCCTTCACCGCATGCACCGC
GAAGGCCACCAGCTCGCCAGCCACGGCTGGACCCATCGCAACATCTTTGCCCTAACCTGGGAATGGGACTATGAC
AGAGTCCACGACGGACCCGGCATGCGCGAAAACCAAATCGTCTACAACGAAATGGCCTTTCGCAACATTTTTGGC
TGGGTGCCTACTTACTTTCGCGCGCCATTCAACGCCTGCCATAGACCGTGTCAAAAGTTTCTCGCTAGTATGGGC
TATCACCTCATTGGGCGGACAAACACGCTCAAGGATCAAAACGAGAGTGTGAGAAAGTCTTTGGAGCGGATCCGG
CTGTCGTTTCGCTCGCGGTGGCATTCGCGCCATAGCATCATTATCCAGAGCAGTGATGTGCAGTGGAAGTCGGTT
GAGCACATGACGCCTAAGATTATTCGGAGGGGGAGAGAACTGGGATGGTACTTTGTCACGATTGGCGAGTGCATG
AATGATCCCAAGGAGAATTGGTATCGTCAGGCCGCGTTTCTGGACGATTTGAATCCTTGGAACGCCACGTCTGCG
AGTAGATCGGGTGTTCCGCTCTTTTACAACTCTTCCATGAGTTGGAATGCCACGTCTGCGAGTAGATCGGATGTT
TCGCTCTTGGCCAACTCTCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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