Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|2284
Gene name
Location	Contig_17:143580..144423
Strand	-
Gene length (bp)	843
Transcript length (bp)	693
Coding sequence length (bp)	693
Protein length (aa)	231

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03987	Autophagy_act_C	Autophagocytosis associated protein, active-site domain	2.3E-27	85	225

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9H0Y0\|ATG10_HUMAN	Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sapiens GN=ATG10 PE=1 SV=1	115	228	5.0E-07
sp\|Q8R1P4\|ATG10_MOUSE	Ubiquitin-like-conjugating enzyme ATG10 OS=Mus musculus GN=Atg10 PE=1 SV=1	110	228	6.0E-07
sp\|Q8VZ52\|ATG10_ARATH	Ubiquitin-like-conjugating enzyme ATG10 OS=Arabidopsis thaliana GN=ATG10 PE=1 SV=1	90	227	6.0E-06

GO

GO Term	Description	Terminal node
GO:0019787	ubiquitin-like protein transferase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No
GO:0016740	transferase activity	No
GO:0140096	catalytic activity, acting on a protein	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 54	0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|2284 MDIKDFPFLSTGEFSDACHKLEASYGIAELGSLRNSWKLRLRTALGTIFYVSGINPTYIQITCPLKPAIDSRDSL SLDLANLQMSDPVEADDIMAETEQLDTAVLNPLVPQQDPEIVVYEIHLHPTYRVPCLWFSLHNLASGEPAFNIDT IFRRLVPDEYKSGLRQVGGIGSISADHHPITGVPCFFLHPCMVGDALSKFDCSTQNYLMIWLGLVGGWVGLWVPK EMAVQ*
Coding	>OphauB2\|2284 ATGGATATCAAAGACTTCCCTTTCTTGTCCACAGGTGAATTTTCAGATGCCTGCCATAAACTCGAAGCAAGCTAT GGCATCGCAGAACTGGGTTCGCTACGAAACAGCTGGAAGCTGAGACTTCGCACCGCTCTCGGCACCATCTTTTAC GTCTCGGGCATCAACCCAACTTATATCCAGATTACTTGCCCTTTGAAGCCTGCTATCGACAGCCGTGATTCCTTG TCTCTTGATCTCGCCAACCTGCAAATGTCGGACCCGGTCGAGGCGGATGATATCATGGCGGAAACAGAACAGCTT GACACGGCGGTACTCAACCCCCTGGTGCCTCAACAGGACCCCGAGATCGTAGTCTACGAGATACACCTTCACCCC ACCTATAGAGTCCCATGCCTATGGTTTAGCCTCCACAACCTGGCTTCGGGCGAGCCCGCTTTCAATATCGATACC ATCTTTCGCCGTCTGGTCCCTGATGAGTATAAAAGCGGGCTTCGTCAAGTGGGCGGCATCGGAAGCATATCTGCA GACCATCATCCCATCACAGGAGTCCCGTGTTTTTTCCTCCACCCTTGTATGGTGGGCGACGCCTTGTCCAAGTTC GACTGCTCCACGCAAAACTATCTCATGATTTGGCTGGGGCTCGTGGGTGGTTGGGTTGGACTGTGGGTGCCCAAA GAAATGGCCGTACAATAA
Transcript	>OphauB2\|2284 ATGGATATCAAAGACTTCCCTTTCTTGTCCACAGGTGAATTTTCAGATGCCTGCCATAAACTCGAAGCAAGCTAT GGCATCGCAGAACTGGGTTCGCTACGAAACAGCTGGAAGCTGAGACTTCGCACCGCTCTCGGCACCATCTTTTAC GTCTCGGGCATCAACCCAACTTATATCCAGATTACTTGCCCTTTGAAGCCTGCTATCGACAGCCGTGATTCCTTG TCTCTTGATCTCGCCAACCTGCAAATGTCGGACCCGGTCGAGGCGGATGATATCATGGCGGAAACAGAACAGCTT GACACGGCGGTACTCAACCCCCTGGTGCCTCAACAGGACCCCGAGATCGTAGTCTACGAGATACACCTTCACCCC ACCTATAGAGTCCCATGCCTATGGTTTAGCCTCCACAACCTGGCTTCGGGCGAGCCCGCTTTCAATATCGATACC ATCTTTCGCCGTCTGGTCCCTGATGAGTATAAAAGCGGGCTTCGTCAAGTGGGCGGCATCGGAAGCATATCTGCA GACCATCATCCCATCACAGGAGTCCCGTGTTTTTTCCTCCACCCTTGTATGGTGGGCGACGCCTTGTCCAAGTTC GACTGCTCCACGCAAAACTATCTCATGATTTGGCTGGGGCTCGTGGGTGGTTGGGTTGGACTGTGGGTGCCCAAA GAAATGGCCGTACAATAA
Gene	>OphauB2\|2284 ATGGATATCAAAGACTTCCCTTTCTTGTCCACAGGTGAATTTTCAGATGCCTGCCATAAACTCGAAGCAAGCTAT GGCATCGCAGAACTGGGTTCGCTACGAAACAGCTGGAAGCTGAGACTTCGCACCGCTCTCGGCACCATCTTTTAC GTCTCGGGCATCAACCCAACTTATATCCAGATTACTTGCCCTTTGAAGCCTGCTATCGACAGCCGTGATTCCTTG TCTCTTGATCTCGCCAACCTGCAAATGTCGGACCCGGTCGAGGCGGATGATATCATGGCGGAAACAGAACAGCTT GACACGGTGTGTACTCAAGTTCAAGCACTCGGTATTATTTTTATTTCATTTTTTTTGAATGGCTTACATGCCTCG AGGCGGTACTCAACCCCCTGGTGCCTCAACAGGACCCCGAGATCGTAGTCTACGAGATACACCTTCACCCCACCT ATAGAGTCCCATGCCTATGGTTTAGCCTCCACAACCTGGCTTCGGGCGAGCCCGCTTTCAATATCGATACCATCT TTCGCCGTCTGGTCCCTGATGAGTATAAAAGCGGGCTTCGTCAAGTGGGCGGCATCGGAAGCATATCTGCAGACG TGAGTTTTGTGCAGTCTGTCGCAGGCCGCCTCGTCAGAAATGTCCGGAAAGCTAGCTAATTGACAATCCTGATGG TAGCATCATCCCATCACAGGAGTCCCGTGTTTTTTCCTCCACCCTTGTATGGTGGGCGACGCCTTGTCCAAGTTC GACTGCTCCACGCAAAACTATCTCATGATTTGGCTGGGGCTCGTGGGTGGTTGGGTTGGACTGTGGGTGCCCAAA GAAATGGCCGTACAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail