© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2265 |
| Gene name | |
| Location | Contig_17:96454..98384 |
| Strand | + |
| Gene length (bp) | 1930 |
| Transcript length (bp) | 1875 |
| Coding sequence length (bp) | 1875 |
| Protein length (aa) | 625 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10637 | Ofd1_CTDD | Oxoglutarate and iron-dependent oxygenase degradation C-term | 2.2E-86 | 323 | 597 |
| PF13661 | 2OG-FeII_Oxy_4 | 2OG-Fe(II) oxygenase superfamily | 1.6E-29 | 147 | 266 |
| PF13640 | 2OG-FeII_Oxy_3 | 2OG-Fe(II) oxygenase superfamily | 7.3E-14 | 148 | 266 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q11120|OFD1_SCHPO | Prolyl 3,4-dihydroxylase ofd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ofd1 PE=1 SV=1 | 25 | 591 | 1.0E-128 |
| sp|P40032|TPA1_YEAST | Prolyl 3,4-dihydroxylase TPA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPA1 PE=1 SV=1 | 1 | 601 | 7.0E-114 |
| sp|Q01F03|OGFD1_OSTTA | Prolyl 3,4-dihydroxylase OGFOD1 OS=Ostreococcus tauri GN=Ogd PE=1 SV=1 | 54 | 590 | 1.0E-66 |
| sp|Q5R4R3|OGFD1_PONAB | Prolyl 3-hydroxylase OGFOD1 OS=Pongo abelii GN=OGFOD1 PE=2 SV=1 | 54 | 579 | 2.0E-29 |
| sp|Q8N543|OGFD1_HUMAN | Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens GN=OGFOD1 PE=1 SV=1 | 54 | 579 | 1.0E-28 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q11120|OFD1_SCHPO | Prolyl 3,4-dihydroxylase ofd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ofd1 PE=1 SV=1 | 25 | 591 | 1.0E-128 |
| sp|P40032|TPA1_YEAST | Prolyl 3,4-dihydroxylase TPA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPA1 PE=1 SV=1 | 1 | 601 | 7.0E-114 |
| sp|Q01F03|OGFD1_OSTTA | Prolyl 3,4-dihydroxylase OGFOD1 OS=Ostreococcus tauri GN=Ogd PE=1 SV=1 | 54 | 590 | 1.0E-66 |
| sp|Q5R4R3|OGFD1_PONAB | Prolyl 3-hydroxylase OGFOD1 OS=Pongo abelii GN=OGFOD1 PE=2 SV=1 | 54 | 579 | 2.0E-29 |
| sp|Q8N543|OGFD1_HUMAN | Prolyl 3-hydroxylase OGFOD1 OS=Homo sapiens GN=OGFOD1 PE=1 SV=1 | 54 | 579 | 1.0E-28 |
| sp|Q3U0K8|OGFD1_MOUSE | Prolyl 3-hydroxylase OGFOD1 OS=Mus musculus GN=Ogfod1 PE=1 SV=1 | 54 | 366 | 2.0E-26 |
| sp|Q3MI03|OGFD1_BOVIN | Prolyl 3-hydroxylase OGFOD1 OS=Bos taurus GN=OGFOD1 PE=2 SV=2 | 54 | 416 | 7.0E-26 |
| sp|Q6DE73|OGFD1_XENLA | Prolyl 3-hydroxylase OGFOD1 OS=Xenopus laevis GN=ogfod1 PE=2 SV=1 | 5 | 360 | 3.0E-25 |
| sp|Q9I7H9|OGFD1_DROME | Prolyl 3-hydroxylase sudestada1 OS=Drosophila melanogaster GN=sud1 PE=2 SV=1 | 54 | 266 | 2.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0031418 | L-ascorbic acid binding | Yes |
| GO:0005506 | iron ion binding | Yes |
| GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | Yes |
| GO:0046872 | metal ion binding | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0019842 | vitamin binding | No |
| GO:0043177 | organic acid binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| GO:0031406 | carboxylic acid binding | No |
| GO:0043167 | ion binding | No |
| GO:0051213 | dioxygenase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0043169 | cation binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0030246 | carbohydrate binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0048029 | monosaccharide binding | No |
| GO:0043168 | anion binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2265 MKRKAKTRPSGREKRIKRPKAALSLGQAQQRFRPGLLDKSVLDSYTTQYAKATPYKHAVIPDLVNDSLLRSVRHE ILNNVDFTPKETDIYKIHQSGDLANLDGLDDESLAKLPSLLALRDAIYSETFRNYICAITGCGPLSGRKTDMAIN VYTPGCYLLCHDDVIGSRRVSYILYLTDPEKPWQPEWGGALRLYATKKIENSNGQIAKTPRPDVAKVIPPAWNQL SFFAVQPGESFHDVQEVYHAETDELQADGGRVRMAISGWFHIPQEGESGYVQGEEERNAKNSGLMQLQGNPDQYD TPQPRLVTVSNPTSLLYEFDEADLEFLLQFISPTFLTPYTLEQVSEHFEENSSITLANILSKKFAKRLKDYVTEQ EVLPLPHHTAEIESQTAWTVASPPHKHRYLYQSLRKPDQLRAEQDKSPLAELIGTLLPSRQFRHWLLLATDCTIK GHDILARRFRRGLDYTLATGHNGKPRLEVNIGITPTHGWGDDDYDENEAMNKVSANNQTETQEAADGVGGHEVFM AGDDDASEDAAIYKSSTDDDDNILFYQAAAWNKMTIVLRDRGTLKFVKYISQRAKGDRWDVCGEYHIEDLEEDGK DVDTNSNAGASEASTEEEFKGFSD* |
| Coding | >OphauB2|2265 ATGAAGAGAAAAGCAAAAACTCGGCCAAGTGGGCGCGAGAAGAGAATCAAGCGGCCCAAAGCAGCTCTTTCTCTT GGCCAGGCCCAGCAGCGTTTTCGCCCTGGCTTGCTGGATAAGTCGGTCCTTGACTCTTACACCACCCAGTACGCC AAAGCCACGCCCTACAAACACGCTGTCATTCCCGACTTGGTCAACGATTCTCTGCTTCGCTCCGTGCGCCACGAG ATTCTCAACAATGTCGACTTCACTCCAAAAGAGACAGACATCTACAAGATCCACCAGTCGGGCGACCTTGCCAAC CTCGACGGCCTCGATGACGAATCGCTGGCAAAGTTGCCCTCACTCCTTGCACTGCGCGACGCTATTTACTCTGAG ACGTTTCGCAATTACATTTGCGCTATTACCGGTTGCGGTCCTCTGAGTGGTCGTAAGACTGACATGGCCATCAAT GTCTATACTCCGGGCTGCTATCTACTCTGTCACGACGATGTCATTGGCAGCCGTCGTGTAAGCTATATTCTTTAC TTGACGGACCCCGAGAAGCCTTGGCAGCCAGAGTGGGGAGGTGCCCTTCGCCTCTATGCGACCAAGAAAATCGAG AACAGCAATGGCCAAATTGCCAAGACACCGCGGCCTGATGTCGCCAAGGTCATTCCACCTGCTTGGAATCAGCTC AGCTTCTTTGCTGTCCAGCCGGGTGAGAGCTTTCATGATGTTCAAGAGGTCTATCATGCCGAGACCGATGAGCTA CAAGCGGACGGCGGTCGCGTTCGCATGGCCATCAGTGGCTGGTTTCATATTCCACAAGAAGGCGAGAGCGGCTAT GTCCAGGGTGAAGAGGAGAGGAATGCCAAGAACAGCGGATTGATGCAACTTCAAGGCAATCCAGACCAGTACGAT ACACCCCAGCCACGGCTCGTCACCGTTTCGAACCCTACATCTCTTTTGTATGAATTCGACGAGGCTGACCTCGAA TTTTTGCTTCAATTCATCTCACCGACTTTTTTGACTCCATATACACTAGAACAGGTGTCTGAGCATTTCGAAGAG AATTCAAGCATTACTCTTGCCAATATCTTGTCCAAGAAGTTCGCCAAAAGACTCAAGGACTACGTAACAGAGCAG GAAGTGCTTCCATTACCCCATCACACGGCTGAAATTGAAAGTCAAACGGCGTGGACTGTGGCTAGTCCGCCACAC AAGCACAGATATCTTTATCAGTCTCTCAGAAAGCCAGACCAGCTCCGCGCCGAACAAGACAAATCGCCTCTTGCT GAATTGATCGGCACTCTTTTGCCCAGTCGTCAGTTTCGACATTGGCTGCTTCTGGCCACTGATTGTACCATCAAA GGCCATGACATATTGGCGCGGCGTTTCCGTCGTGGACTGGATTATACATTGGCGACTGGCCATAACGGGAAGCCA CGTCTTGAAGTCAACATTGGTATCACGCCAACTCATGGATGGGGCGATGACGATTACGACGAGAACGAAGCCATG AATAAGGTCTCGGCCAATAATCAAACCGAAACGCAAGAAGCAGCAGACGGTGTTGGAGGCCATGAGGTTTTCATG GCAGGCGATGACGACGCCAGCGAAGACGCAGCAATTTACAAGTCGAGCACCGACGACGATGATAATATCCTTTTC TATCAAGCTGCAGCGTGGAACAAAATGACCATTGTTCTGCGTGACAGAGGCACTCTCAAATTTGTCAAGTACATT AGTCAGAGGGCCAAGGGAGACCGCTGGGATGTTTGCGGCGAGTACCACATAGAAGACCTGGAAGAAGATGGCAAA GACGTGGATACCAATAGTAATGCAGGGGCCTCAGAGGCGTCAACTGAGGAAGAGTTCAAGGGCTTCTCAGATTAA |
| Transcript | >OphauB2|2265 ATGAAGAGAAAAGCAAAAACTCGGCCAAGTGGGCGCGAGAAGAGAATCAAGCGGCCCAAAGCAGCTCTTTCTCTT GGCCAGGCCCAGCAGCGTTTTCGCCCTGGCTTGCTGGATAAGTCGGTCCTTGACTCTTACACCACCCAGTACGCC AAAGCCACGCCCTACAAACACGCTGTCATTCCCGACTTGGTCAACGATTCTCTGCTTCGCTCCGTGCGCCACGAG ATTCTCAACAATGTCGACTTCACTCCAAAAGAGACAGACATCTACAAGATCCACCAGTCGGGCGACCTTGCCAAC CTCGACGGCCTCGATGACGAATCGCTGGCAAAGTTGCCCTCACTCCTTGCACTGCGCGACGCTATTTACTCTGAG ACGTTTCGCAATTACATTTGCGCTATTACCGGTTGCGGTCCTCTGAGTGGTCGTAAGACTGACATGGCCATCAAT GTCTATACTCCGGGCTGCTATCTACTCTGTCACGACGATGTCATTGGCAGCCGTCGTGTAAGCTATATTCTTTAC TTGACGGACCCCGAGAAGCCTTGGCAGCCAGAGTGGGGAGGTGCCCTTCGCCTCTATGCGACCAAGAAAATCGAG AACAGCAATGGCCAAATTGCCAAGACACCGCGGCCTGATGTCGCCAAGGTCATTCCACCTGCTTGGAATCAGCTC AGCTTCTTTGCTGTCCAGCCGGGTGAGAGCTTTCATGATGTTCAAGAGGTCTATCATGCCGAGACCGATGAGCTA CAAGCGGACGGCGGTCGCGTTCGCATGGCCATCAGTGGCTGGTTTCATATTCCACAAGAAGGCGAGAGCGGCTAT GTCCAGGGTGAAGAGGAGAGGAATGCCAAGAACAGCGGATTGATGCAACTTCAAGGCAATCCAGACCAGTACGAT ACACCCCAGCCACGGCTCGTCACCGTTTCGAACCCTACATCTCTTTTGTATGAATTCGACGAGGCTGACCTCGAA TTTTTGCTTCAATTCATCTCACCGACTTTTTTGACTCCATATACACTAGAACAGGTGTCTGAGCATTTCGAAGAG AATTCAAGCATTACTCTTGCCAATATCTTGTCCAAGAAGTTCGCCAAAAGACTCAAGGACTACGTAACAGAGCAG GAAGTGCTTCCATTACCCCATCACACGGCTGAAATTGAAAGTCAAACGGCGTGGACTGTGGCTAGTCCGCCACAC AAGCACAGATATCTTTATCAGTCTCTCAGAAAGCCAGACCAGCTCCGCGCCGAACAAGACAAATCGCCTCTTGCT GAATTGATCGGCACTCTTTTGCCCAGTCGTCAGTTTCGACATTGGCTGCTTCTGGCCACTGATTGTACCATCAAA GGCCATGACATATTGGCGCGGCGTTTCCGTCGTGGACTGGATTATACATTGGCGACTGGCCATAACGGGAAGCCA CGTCTTGAAGTCAACATTGGTATCACGCCAACTCATGGATGGGGCGATGACGATTACGACGAGAACGAAGCCATG AATAAGGTCTCGGCCAATAATCAAACCGAAACGCAAGAAGCAGCAGACGGTGTTGGAGGCCATGAGGTTTTCATG GCAGGCGATGACGACGCCAGCGAAGACGCAGCAATTTACAAGTCGAGCACCGACGACGATGATAATATCCTTTTC TATCAAGCTGCAGCGTGGAACAAAATGACCATTGTTCTGCGTGACAGAGGCACTCTCAAATTTGTCAAGTACATT AGTCAGAGGGCCAAGGGAGACCGCTGGGATGTTTGCGGCGAGTACCACATAGAAGACCTGGAAGAAGATGGCAAA GACGTGGATACCAATAGTAATGCAGGGGCCTCAGAGGCGTCAACTGAGGAAGAGTTCAAGGGCTTCTCAGATTAA |
| Gene | >OphauB2|2265 ATGAAGAGAAAAGCAAAAACTCGGCCAAGTGGGCGCGAGAAGAGAATCAAGCGGCCCAAAGCAGGTCAGTCGTGC TGCAAGACACGCCATGGGAGCTCGCTACTAACTGTTGCTCTTAGCTCTTTCTCTTGGCCAGGCCCAGCAGCGTTT TCGCCCTGGCTTGCTGGATAAGTCGGTCCTTGACTCTTACACCACCCAGTACGCCAAAGCCACGCCCTACAAACA CGCTGTCATTCCCGACTTGGTCAACGATTCTCTGCTTCGCTCCGTGCGCCACGAGATTCTCAACAATGTCGACTT CACTCCAAAAGAGACAGACATCTACAAGATCCACCAGTCGGGCGACCTTGCCAACCTCGACGGCCTCGATGACGA ATCGCTGGCAAAGTTGCCCTCACTCCTTGCACTGCGCGACGCTATTTACTCTGAGACGTTTCGCAATTACATTTG CGCTATTACCGGTTGCGGTCCTCTGAGTGGTCGTAAGACTGACATGGCCATCAATGTCTATACTCCGGGCTGCTA TCTACTCTGTCACGACGATGTCATTGGCAGCCGTCGTGTAAGCTATATTCTTTACTTGACGGACCCCGAGAAGCC TTGGCAGCCAGAGTGGGGAGGTGCCCTTCGCCTCTATGCGACCAAGAAAATCGAGAACAGCAATGGCCAAATTGC CAAGACACCGCGGCCTGATGTCGCCAAGGTCATTCCACCTGCTTGGAATCAGCTCAGCTTCTTTGCTGTCCAGCC GGGTGAGAGCTTTCATGATGTTCAAGAGGTCTATCATGCCGAGACCGATGAGCTACAAGCGGACGGCGGTCGCGT TCGCATGGCCATCAGTGGCTGGTTTCATATTCCACAAGAAGGCGAGAGCGGCTATGTCCAGGGTGAAGAGGAGAG GAATGCCAAGAACAGCGGATTGATGCAACTTCAAGGCAATCCAGACCAGTACGATACACCCCAGCCACGGCTCGT CACCGTTTCGAACCCTACATCTCTTTTGTATGAATTCGACGAGGCTGACCTCGAATTTTTGCTTCAATTCATCTC ACCGACTTTTTTGACTCCATATACACTAGAACAGGTGTCTGAGCATTTCGAAGAGAATTCAAGCATTACTCTTGC CAATATCTTGTCCAAGAAGTTCGCCAAAAGACTCAAGGACTACGTAACAGAGCAGGAAGTGCTTCCATTACCCCA TCACACGGCTGAAATTGAAAGTCAAACGGCGTGGACTGTGGCTAGTCCGCCACACAAGCACAGATATCTTTATCA GTCTCTCAGAAAGCCAGACCAGCTCCGCGCCGAACAAGACAAATCGCCTCTTGCTGAATTGATCGGCACTCTTTT GCCCAGTCGTCAGTTTCGACATTGGCTGCTTCTGGCCACTGATTGTACCATCAAAGGCCATGACATATTGGCGCG GCGTTTCCGTCGTGGACTGGATTATACATTGGCGACTGGCCATAACGGGAAGCCACGTCTTGAAGTCAACATTGG TATCACGCCAACTCATGGATGGGGCGATGACGATTACGACGAGAACGAAGCCATGAATAAGGTCTCGGCCAATAA TCAAACCGAAACGCAAGAAGCAGCAGACGGTGTTGGAGGCCATGAGGTTTTCATGGCAGGCGATGACGACGCCAG CGAAGACGCAGCAATTTACAAGTCGAGCACCGACGACGATGATAATATCCTTTTCTATCAAGCTGCAGCGTGGAA CAAAATGACCATTGTTCTGCGTGACAGAGGCACTCTCAAATTTGTCAAGTACATTAGTCAGAGGGCCAAGGGAGA CCGCTGGGATGTTTGCGGCGAGTACCACATAGAAGACCTGGAAGAAGATGGCAAAGACGTGGATACCAATAGTAA TGCAGGGGCCTCAGAGGCGTCAACTGAGGAAGAGTTCAAGGGCTTCTCAGATTAA |