Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2255
Gene name
LocationContig_17:62832..64247
Strand+
Gene length (bp)1415
Transcript length (bp)1176
Coding sequence length (bp)1176
Protein length (aa) 392

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01207 Dus Dihydrouridine synthase (Dus) 5.3E-34 40 336

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O95620|DUS4L_HUMAN tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS4L PE=2 SV=2 23 339 2.0E-52
sp|O74553|DUS4_SCHPO tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus4 PE=3 SV=1 23 375 7.0E-52
sp|Q32M08|DUS4L_MOUSE tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1 23 339 2.0E-51
sp|Q06063|DUS4_YEAST tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS4 PE=1 SV=1 23 375 6.0E-51
sp|Q09504|YQI2_CAEEL Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 OS=Caenorhabditis elegans GN=C45G9.2 PE=3 SV=2 43 348 4.0E-46
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Swissprot ID Swissprot Description Start End E-value
sp|O95620|DUS4L_HUMAN tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS4L PE=2 SV=2 23 339 2.0E-52
sp|O74553|DUS4_SCHPO tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus4 PE=3 SV=1 23 375 7.0E-52
sp|Q32M08|DUS4L_MOUSE tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus4l PE=2 SV=1 23 339 2.0E-51
sp|Q06063|DUS4_YEAST tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS4 PE=1 SV=1 23 375 6.0E-51
sp|Q09504|YQI2_CAEEL Uncharacterized tRNA-dihydrouridine synthase-like protein C45G9.2 OS=Caenorhabditis elegans GN=C45G9.2 PE=3 SV=2 43 348 4.0E-46
sp|Q6P1R4|DUS1L_HUMAN tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens GN=DUS1L PE=1 SV=1 38 388 1.0E-28
sp|Q8C2P3|DUS1L_MOUSE tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus GN=Dus1l PE=2 SV=1 38 388 3.0E-28
sp|Q8K582|DUS1L_RAT tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus GN=Dus1l PE=2 SV=1 38 384 8.0E-28
sp|Q9HGN6|DUS1_SCHPO tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus1 PE=3 SV=1 41 309 4.0E-21
sp|P53759|DUS1_YEAST tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DUS1 PE=1 SV=1 6 304 1.0E-15
sp|O74731|DUS2_SCHPO tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dus2 PE=3 SV=1 41 260 2.0E-12
sp|P53720|DUS2_YEAST tRNA-dihydrouridine(20) synthase [NAD(P)+] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMM1 PE=1 SV=1 41 257 2.0E-09
sp|O67533|DUS_AQUAE Probable tRNA-dihydrouridine synthase OS=Aquifex aeolicus (strain VF5) GN=dus PE=3 SV=1 41 304 3.0E-07
sp|Q9D7B1|DUS2L_MOUSE tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Mus musculus GN=Dus2 PE=1 SV=1 41 304 4.0E-07
sp|Q9NX74|DUS2L_HUMAN tRNA-dihydrouridine(20) synthase [NAD(P)+]-like OS=Homo sapiens GN=DUS2 PE=1 SV=1 41 329 2.0E-06
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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup1452
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2868
Ophiocordyceps australis map64 (Brazil) OphauB2|2255 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|05114
Ophiocordyceps camponoti-rufipedis Ophun1|7510
Ophiocordyceps kimflemingae Ophio5|4373
Ophiocordyceps subramaniannii Hirsu2|11

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2255
MALHREPSSESLQALVASCQGHPLKIFDAARSQDRFVHACAPMVRYSKLAFRQTVHQFGVDLCWTPMILAKEFNR
NSFARDSDLSVSTLPRQPPTIIQFGANCPTELSRAASLAACCVSGIDLNCGCPQSWACASCLGAALMSRRELVRD
MVMETRARLVRDGWLVGFDDSQVASPLGRSVSVKIRLHSDLRRTIDFVDTLVGLGGSRGQRLVDWITIHPRTRNT
PSSVPIDTEALQLLTSRYAATLPILLSGDVFDLADLPIVPHHASSTAPDAATTAAPKPSNTGLAGFMSARGLLAN
PALFAGHSSCPWLALETFMCNAARSPLPFKLLLHHVVQMCAPGMGADKTALLPKRDRASLVKIDNMLHLVDFLDQ
KCDELTGRQGGLRRHL*
Coding >OphauB2|2255
ATGGCCCTACACAGAGAGCCCTCGTCCGAGAGCCTCCAGGCCCTGGTGGCTTCTTGCCAGGGCCACCCGCTAAAG
ATCTTTGACGCGGCGCGCTCTCAAGATCGCTTTGTGCACGCCTGTGCTCCCATGGTGCGGTACAGCAAGCTCGCC
TTTCGCCAGACAGTGCATCAGTTTGGCGTCGACTTGTGCTGGACGCCCATGATTCTGGCAAAGGAATTCAACCGC
AACAGCTTCGCCCGAGATAGCGACTTGTCCGTCTCAACGCTCCCCCGCCAGCCTCCAACCATTATCCAGTTCGGC
GCAAATTGCCCCACTGAGCTCTCGCGTGCCGCCTCCCTCGCGGCTTGCTGCGTCTCGGGCATTGACCTCAACTGT
GGCTGTCCCCAATCCTGGGCCTGCGCTTCGTGTCTGGGCGCCGCACTCATGTCTCGGCGTGAGCTTGTGCGCGAC
ATGGTGATGGAGACACGCGCTCGCCTCGTCCGCGATGGCTGGCTTGTGGGCTTCGACGACAGTCAGGTAGCCAGT
CCGCTGGGGAGGAGTGTCAGCGTCAAGATTCGACTTCATTCTGACCTGCGCCGCACCATTGACTTTGTGGACACG
CTGGTGGGCTTGGGGGGAAGCCGAGGTCAGCGTCTGGTGGATTGGATCACGATTCACCCGCGCACCAGAAACACG
CCGTCATCTGTGCCCATAGACACAGAGGCGTTGCAGCTATTGACGTCGCGATATGCCGCCACGCTACCAATTCTT
CTTTCTGGCGATGTCTTTGATCTCGCCGACCTGCCCATAGTCCCGCATCACGCCTCGTCTACCGCCCCAGATGCT
GCTACTACAGCTGCTCCAAAGCCTAGCAACACTGGCCTCGCTGGCTTCATGTCGGCACGCGGCCTCCTCGCCAAC
CCGGCTCTCTTCGCAGGCCACTCGTCATGCCCCTGGCTCGCCCTCGAGACTTTTATGTGCAACGCCGCACGCTCT
CCACTGCCCTTCAAGCTCCTCCTCCATCATGTGGTCCAGATGTGCGCTCCAGGCATGGGGGCAGACAAGACAGCA
CTGCTGCCCAAGCGCGACCGTGCCAGTCTCGTAAAAATTGACAATATGCTCCATCTGGTCGACTTTCTAGACCAA
AAATGCGACGAGCTGACGGGGCGACAGGGCGGGCTGCGACGCCACCTATAA
Transcript >OphauB2|2255
ATGGCCCTACACAGAGAGCCCTCGTCCGAGAGCCTCCAGGCCCTGGTGGCTTCTTGCCAGGGCCACCCGCTAAAG
ATCTTTGACGCGGCGCGCTCTCAAGATCGCTTTGTGCACGCCTGTGCTCCCATGGTGCGGTACAGCAAGCTCGCC
TTTCGCCAGACAGTGCATCAGTTTGGCGTCGACTTGTGCTGGACGCCCATGATTCTGGCAAAGGAATTCAACCGC
AACAGCTTCGCCCGAGATAGCGACTTGTCCGTCTCAACGCTCCCCCGCCAGCCTCCAACCATTATCCAGTTCGGC
GCAAATTGCCCCACTGAGCTCTCGCGTGCCGCCTCCCTCGCGGCTTGCTGCGTCTCGGGCATTGACCTCAACTGT
GGCTGTCCCCAATCCTGGGCCTGCGCTTCGTGTCTGGGCGCCGCACTCATGTCTCGGCGTGAGCTTGTGCGCGAC
ATGGTGATGGAGACACGCGCTCGCCTCGTCCGCGATGGCTGGCTTGTGGGCTTCGACGACAGTCAGGTAGCCAGT
CCGCTGGGGAGGAGTGTCAGCGTCAAGATTCGACTTCATTCTGACCTGCGCCGCACCATTGACTTTGTGGACACG
CTGGTGGGCTTGGGGGGAAGCCGAGGTCAGCGTCTGGTGGATTGGATCACGATTCACCCGCGCACCAGAAACACG
CCGTCATCTGTGCCCATAGACACAGAGGCGTTGCAGCTATTGACGTCGCGATATGCCGCCACGCTACCAATTCTT
CTTTCTGGCGATGTCTTTGATCTCGCCGACCTGCCCATAGTCCCGCATCACGCCTCGTCTACCGCCCCAGATGCT
GCTACTACAGCTGCTCCAAAGCCTAGCAACACTGGCCTCGCTGGCTTCATGTCGGCACGCGGCCTCCTCGCCAAC
CCGGCTCTCTTCGCAGGCCACTCGTCATGCCCCTGGCTCGCCCTCGAGACTTTTATGTGCAACGCCGCACGCTCT
CCACTGCCCTTCAAGCTCCTCCTCCATCATGTGGTCCAGATGTGCGCTCCAGGCATGGGGGCAGACAAGACAGCA
CTGCTGCCCAAGCGCGACCGTGCCAGTCTCGTAAAAATTGACAATATGCTCCATCTGGTCGACTTTCTAGACCAA
AAATGCGACGAGCTGACGGGGCGACAGGGCGGGCTGCGACGCCACCTATAA
Gene >OphauB2|2255
ATGGCCCTACACAGAGAGCCCTCGTCCGAGAGCCTCCAGGCCCTGGTGGCTTCTTGCCAGGGCCAGTAAGTGCCC
CGCAGGCCCAAGCCGTGGGCCGTCAAGTCGGCTAATAGTCGTCTTGCTCAACAGCCCGCTAAAGATCTTTGACGC
GGCGCGCTCTCAAGATCGCTTTGTGCACGCCTGTGCTCCCATGGTGCGGTACAGCAAGGCAAGTGTTTGCCACGT
GGTTCTTGACATGACTTTTCCAATTGCTTCCTTGGTCTCGTGTGCCAAAAGACGCTCTTCTCATTGTTTTGCCAG
CTCGCCTTTCGCCAGACAGTGCATCAGTTTGGCGTCGACTTGTGCTGGACGCCCATGATTCTGGCAAAGGAATTC
AACCGCAACAGCTTCGCCCGAGATAGCGGTGCGTCTTGTCCTCTGCCACGAGCTGCACATGACTGGCCTTTGCCT
CGACGACCTTGAGCTGACGCCTGCTGGCGCAACAAGACTTGTCCGTCTCAACGCTCCCCCGCCAGCCTCCAACCA
TTATCCAGTTCGGCGCAAATTGCCCCACTGAGCTCTCGCGTGCCGCCTCCCTCGCGGCTTGCTGCGTCTCGGGCA
TTGACCTCAACTGTGGCTGTCCCCAATCCTGGGCCTGCGCTTCGTGTCTGGGCGCCGCACTCATGTCTCGGCGTG
AGCTTGTGCGCGACATGGTGATGGAGACACGCGCTCGCCTCGTCCGCGATGGCTGGCTTGTGGGCTTCGACGACA
GTCAGGTAGCCAGTCCGCTGGGGAGGAGTGTCAGCGTCAAGATTCGACTTCATTCTGACCTGCGCCGCACCATTG
ACTTTGTGGACACGCTGGTGGGCTTGGGGGGAAGCCGAGGTCAGCGTCTGGTGGATTGGATCACGATTCACCCGC
GCACCAGAAACACGCCGTCATCTGTGCCCATAGACACAGAGGCGTTGCAGCTATTGACGTCGCGATATGCCGCCA
CGCTACCAATTCTTCTTTCTGGCGATGTCTTTGATCTCGCCGACCTGCCCATAGTCCCGCATCACGCCTCGTCTA
CCGCCCCAGATGCTGCTACTACAGCTGCTCCAAAGCCTAGCAACACTGGCCTCGCTGGCTTCATGTCGGCACGCG
GCCTCCTCGCCAACCCGGCTCTCTTCGCAGGCCACTCGTCATGCCCCTGGCTCGCCCTCGAGACTTTTATGTGCA
ACGCCGCACGCTCTCCACTGCCCTTCAAGCTCCTCCTCCATCATGTGGTCCAGATGTGCGCTCCAGGCATGGGGG
CAGACAAGACAGCACTGCTGCCCAAGCGCGACCGTGCCAGTCTCGTAAAAATTGACAATATGCTCCATCTGGTCG
ACTTTCTAGACCAAAAATGCGACGAGCTGACGGGGCGACAGGGCGGGCTGCGACGCCACCTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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