Protein ID | OphauB2|2250 |
Gene name | |
Location | Contig_17:55091..56060 |
Strand | + |
Gene length (bp) | 969 |
Transcript length (bp) | 969 |
Coding sequence length (bp) | 969 |
Protein length (aa) | 323 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01674 | Lipase_2 | Lipase (class 2) | 1.3E-06 | 75 | 164 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P25275|LIP_PSES5 | Lipase OS=Pseudomonas sp. (strain KWI-56) GN=lip PE=1 SV=1 | 74 | 203 | 6.0E-08 |
sp|P22088|LIP_BURCE | Lipase OS=Burkholderia cepacia GN=lipA PE=1 SV=2 | 74 | 203 | 1.0E-07 |
sp|Q05489|LIP_BURGL | Lipase OS=Burkholderia glumae GN=lipA PE=1 SV=1 | 74 | 201 | 2.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016042 | lipid catabolic process | Yes |
GO:0016787 | hydrolase activity | Yes |
GO:0003824 | catalytic activity | No |
GO:0009056 | catabolic process | No |
GO:0044238 | primary metabolic process | No |
GO:0006629 | lipid metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0008150 | biological_process | No |
GO:0008152 | metabolic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:1901575 | organic substance catabolic process | No |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999584 |
Orthofinder run ID | 4 |
Orthogroup | 3279 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|2250 MLVSTLLLGLMSLLISLAASSPFYDDMEANRFKQIESTIRAWEKQRKKELKGAGPDEPLFPIRNDWSCKSPRHRN PIVMLHGLSGTRQLEVNFLELWLRRQGFCTFSFTYGSWSRIMPELPFLGGVRAVDDSSKEIAGFVQQVIAATNSS KIDIVGHSEGAFLAIYIPRFWPLVGNAANNIIAIGPPTRGTTLRKFFASTLVFGARSRRMWRKVLGKMGCPACDE LLPDGEPIRRLKAATPVRLPHTTLTIIATRHDRTITPPETAFLYEPGVRNMYIQDDCPADPVEHIGLAVDFNVWN VVRNVLDKQVDRKYQCVAGLRI* |
Coding | >OphauB2|2250 ATGCTTGTCTCGACTCTGCTGCTGGGGCTCATGTCCCTGTTGATTAGCCTCGCGGCTAGCTCGCCATTCTACGAC GACATGGAAGCCAACCGCTTCAAGCAAATCGAATCCACCATCAGGGCGTGGGAGAAGCAGCGCAAAAAGGAACTC AAGGGCGCCGGCCCCGACGAGCCCCTCTTTCCCATCCGCAATGACTGGTCCTGCAAGAGCCCGCGCCACAGGAAC CCCATCGTCATGCTCCACGGCCTGTCGGGCACGCGCCAGCTCGAGGTCAACTTTCTCGAGCTGTGGCTTCGCCGC CAGGGCTTCTGCACCTTTTCCTTCACCTATGGCAGCTGGTCGCGCATCATGCCCGAGCTCCCCTTCCTCGGTGGG GTCCGCGCCGTCGACGACTCGAGCAAAGAGATTGCAGGCTTTGTCCAGCAGGTCATTGCCGCCACAAACTCGTCC AAGATTGATATAGTCGGCCACTCCGAGGGCGCCTTTCTCGCCATCTATATCCCTCGCTTCTGGCCTCTGGTGGGC AATGCCGCCAACAACATCATTGCCATTGGGCCCCCGACTCGCGGCACCACACTGCGCAAGTTTTTTGCCTCGACC CTCGTCTTTGGCGCTCGAAGCCGTCGCATGTGGCGCAAGGTGCTGGGCAAGATGGGCTGTCCCGCCTGTGACGAA CTGCTGCCCGATGGCGAGCCCATCAGGCGTCTCAAAGCCGCCACGCCCGTCCGCCTGCCCCATACCACCCTCACC ATCATTGCCACTCGCCACGACAGGACCATTACACCGCCCGAAACAGCCTTTTTGTACGAGCCCGGCGTCCGCAAC ATGTACATCCAAGATGATTGCCCGGCCGACCCTGTCGAGCACATTGGCCTTGCCGTCGACTTCAATGTGTGGAAT GTTGTCCGCAATGTACTCGATAAGCAGGTTGATCGCAAGTATCAGTGTGTCGCCGGCCTTCGCATATAA |
Transcript | >OphauB2|2250 ATGCTTGTCTCGACTCTGCTGCTGGGGCTCATGTCCCTGTTGATTAGCCTCGCGGCTAGCTCGCCATTCTACGAC GACATGGAAGCCAACCGCTTCAAGCAAATCGAATCCACCATCAGGGCGTGGGAGAAGCAGCGCAAAAAGGAACTC AAGGGCGCCGGCCCCGACGAGCCCCTCTTTCCCATCCGCAATGACTGGTCCTGCAAGAGCCCGCGCCACAGGAAC CCCATCGTCATGCTCCACGGCCTGTCGGGCACGCGCCAGCTCGAGGTCAACTTTCTCGAGCTGTGGCTTCGCCGC CAGGGCTTCTGCACCTTTTCCTTCACCTATGGCAGCTGGTCGCGCATCATGCCCGAGCTCCCCTTCCTCGGTGGG GTCCGCGCCGTCGACGACTCGAGCAAAGAGATTGCAGGCTTTGTCCAGCAGGTCATTGCCGCCACAAACTCGTCC AAGATTGATATAGTCGGCCACTCCGAGGGCGCCTTTCTCGCCATCTATATCCCTCGCTTCTGGCCTCTGGTGGGC AATGCCGCCAACAACATCATTGCCATTGGGCCCCCGACTCGCGGCACCACACTGCGCAAGTTTTTTGCCTCGACC CTCGTCTTTGGCGCTCGAAGCCGTCGCATGTGGCGCAAGGTGCTGGGCAAGATGGGCTGTCCCGCCTGTGACGAA CTGCTGCCCGATGGCGAGCCCATCAGGCGTCTCAAAGCCGCCACGCCCGTCCGCCTGCCCCATACCACCCTCACC ATCATTGCCACTCGCCACGACAGGACCATTACACCGCCCGAAACAGCCTTTTTGTACGAGCCCGGCGTCCGCAAC ATGTACATCCAAGATGATTGCCCGGCCGACCCTGTCGAGCACATTGGCCTTGCCGTCGACTTCAATGTGTGGAAT GTTGTCCGCAATGTACTCGATAAGCAGGTTGATCGCAAGTATCAGTGTGTCGCCGGCCTTCGCATATAA |
Gene | >OphauB2|2250 ATGCTTGTCTCGACTCTGCTGCTGGGGCTCATGTCCCTGTTGATTAGCCTCGCGGCTAGCTCGCCATTCTACGAC GACATGGAAGCCAACCGCTTCAAGCAAATCGAATCCACCATCAGGGCGTGGGAGAAGCAGCGCAAAAAGGAACTC AAGGGCGCCGGCCCCGACGAGCCCCTCTTTCCCATCCGCAATGACTGGTCCTGCAAGAGCCCGCGCCACAGGAAC CCCATCGTCATGCTCCACGGCCTGTCGGGCACGCGCCAGCTCGAGGTCAACTTTCTCGAGCTGTGGCTTCGCCGC CAGGGCTTCTGCACCTTTTCCTTCACCTATGGCAGCTGGTCGCGCATCATGCCCGAGCTCCCCTTCCTCGGTGGG GTCCGCGCCGTCGACGACTCGAGCAAAGAGATTGCAGGCTTTGTCCAGCAGGTCATTGCCGCCACAAACTCGTCC AAGATTGATATAGTCGGCCACTCCGAGGGCGCCTTTCTCGCCATCTATATCCCTCGCTTCTGGCCTCTGGTGGGC AATGCCGCCAACAACATCATTGCCATTGGGCCCCCGACTCGCGGCACCACACTGCGCAAGTTTTTTGCCTCGACC CTCGTCTTTGGCGCTCGAAGCCGTCGCATGTGGCGCAAGGTGCTGGGCAAGATGGGCTGTCCCGCCTGTGACGAA CTGCTGCCCGATGGCGAGCCCATCAGGCGTCTCAAAGCCGCCACGCCCGTCCGCCTGCCCCATACCACCCTCACC ATCATTGCCACTCGCCACGACAGGACCATTACACCGCCCGAAACAGCCTTTTTGTACGAGCCCGGCGTCCGCAAC ATGTACATCCAAGATGATTGCCCGGCCGACCCTGTCGAGCACATTGGCCTTGCCGTCGACTTCAATGTGTGGAAT GTTGTCCGCAATGTACTCGATAAGCAGGTTGATCGCAAGTATCAGTGTGTCGCCGGCCTTCGCATATAA |