© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2244 |
| Gene name | |
| Location | Contig_17:35860..36242 |
| Strand | - |
| Gene length (bp) | 382 |
| Transcript length (bp) | 252 |
| Coding sequence length (bp) | 252 |
| Protein length (aa) | 84 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08571 | Yos1 | Yos1-like | 1.9E-34 | 4 | 83 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13825|YOS1_SCHPO | Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 | 1 | 83 | 4.0E-21 |
| sp|Q3E834|YOS1_YEAST | Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 | 4 | 83 | 2.0E-20 |
| sp|Q4VBI2|IR3IP_DANRE | Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 1.0E-13 |
| sp|Q3B8G7|IR3IP_XENLA | Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 4.0E-13 |
| sp|P85007|IR3IP_RAT | Immediate early response 3-interacting protein 1 OS=Rattus norvegicus GN=Ier3ip1 PE=3 SV=1 | 11 | 83 | 5.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O13825|YOS1_SCHPO | Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=yos1 PE=3 SV=1 | 1 | 83 | 4.0E-21 |
| sp|Q3E834|YOS1_YEAST | Protein transport protein YOS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOS1 PE=1 SV=1 | 4 | 83 | 2.0E-20 |
| sp|Q4VBI2|IR3IP_DANRE | Immediate early response 3-interacting protein 1 OS=Danio rerio GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 1.0E-13 |
| sp|Q3B8G7|IR3IP_XENLA | Immediate early response 3-interacting protein 1 OS=Xenopus laevis GN=ier3ip1 PE=3 SV=1 | 11 | 83 | 4.0E-13 |
| sp|P85007|IR3IP_RAT | Immediate early response 3-interacting protein 1 OS=Rattus norvegicus GN=Ier3ip1 PE=3 SV=1 | 11 | 83 | 5.0E-13 |
| sp|Q9CR20|IR3IP_MOUSE | Immediate early response 3-interacting protein 1 OS=Mus musculus GN=Ier3ip1 PE=3 SV=1 | 11 | 83 | 5.0E-13 |
| sp|Q9Y5U9|IR3IP_HUMAN | Immediate early response 3-interacting protein 1 OS=Homo sapiens GN=IER3IP1 PE=1 SV=1 | 11 | 83 | 1.0E-12 |
| sp|Q1JQC2|IR3IP_BOVIN | Immediate early response 3-interacting protein 1 OS=Bos taurus GN=IER3IP1 PE=3 SV=1 | 11 | 83 | 1.0E-12 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 2 | 21 | 19 |
| 2 | 63 | 82 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2244 MLFFGNFFYIAVLLINAVAVLSEDRFLARINLSPASYDPAFGAGADASIKAKIIHLIASIRTIMRMPLIFVNAII ILYELLLG* |
| Coding | >OphauB2|2244 ATGCTCTTCTTTGGCAACTTTTTCTACATTGCCGTCCTCCTCATCAACGCCGTTGCCGTCCTCAGCGAAGACCGT TTTCTCGCCCGCATCAACCTCTCTCCCGCCTCGTACGACCCTGCCTTTGGTGCCGGAGCAGATGCCTCCATCAAG GCCAAAATCATTCACCTCATTGCCAGCATCCGCACCATTATGCGCATGCCCTTGATATTCGTCAACGCAATCATC ATTCTCTACGAGCTCCTTCTCGGATGA |
| Transcript | >OphauB2|2244 ATGCTCTTCTTTGGCAACTTTTTCTACATTGCCGTCCTCCTCATCAACGCCGTTGCCGTCCTCAGCGAAGACCGT TTTCTCGCCCGCATCAACCTCTCTCCCGCCTCGTACGACCCTGCCTTTGGTGCCGGAGCAGATGCCTCCATCAAG GCCAAAATCATTCACCTCATTGCCAGCATCCGCACCATTATGCGCATGCCCTTGATATTCGTCAACGCAATCATC ATTCTCTACGAGCTCCTTCTCGGATGA |
| Gene | >OphauB2|2244 ATGCTCTTCTTTGGCAACTTTTTCTACATTGCCGTCCTCCTCATCAACGCCGTTGCCGTCCTCAGCGAAGACCGT TTTCTCGCCCGCAGTCCGTCCTCCCTGCCCACCCCAATCCTTGTCCCAAGACTACTAATCCATGGTCTCTCTGCT CCAGTCAACCTCTCTCCCGCCTCGTACGACCCTGCCTTTGGTGCCGGAGCAGATGCCTCCATCAAGGCCAAAATC ATTCACCTCATTGCCAGCATCCGCACCATTATGCGCAGTACGCTGCTGCCCACCCCCGAGTCCTCCCTGCCCGCC TAGCTGACCCTGCCCGCCCCAAAAAGTGCCCTTGATATTCGTCAACGCAATCATCATTCTCTACGAGCTCCTTCT CGGATGA |