Protein ID | OphauB2|2188 |
Gene name | |
Location | Contig_167:16063..18197 |
Strand | - |
Gene length (bp) | 2134 |
Transcript length (bp) | 1962 |
Coding sequence length (bp) | 1962 |
Protein length (aa) | 654 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01363 | FYVE | FYVE zinc finger | 8.0E-07 | 184 | 253 |
PF01363 | FYVE | FYVE zinc finger | 1.7E-15 | 338 | 388 |
PF11464 | Rbsn | Rabenosyn Rab binding domain | 7.2E-15 | 590 | 631 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13786|PEP7_SCHPO | Vacuolar segregation protein pep7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pep7 PE=3 SV=1 | 66 | 639 | 5.0E-57 |
sp|P32609|PEP7_YEAST | Vacuolar segregation protein PEP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEP7 PE=1 SV=2 | 130 | 635 | 2.0E-56 |
sp|Q9H1K0|RBNS5_HUMAN | Rabenosyn-5 OS=Homo sapiens GN=RBSN PE=1 SV=2 | 262 | 393 | 3.0E-07 |
sp|Q80Y56|RBNS5_MOUSE | Rabenosyn-5 OS=Mus musculus GN=Rbsn PE=1 SV=1 | 262 | 373 | 4.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0046872 | metal ion binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:0043167 | ion binding | No |
GO:0043169 | cation binding | No |
Orthofinder run ID | 4 |
Orthogroup | 960 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|2188 MSGRRLGGGRILGSGKGLAPPISTPSAAPRARSPFAPSDSSVSLGSHSLSPPVSISLTDPGPDIGSSVSLGTQAK GTAAPSTDLVCPICNEEMVTLLQLNRHIDDNHQELPEHEQNEVNTWFDKQVLKAKRFQPLSLINQKLRGLDVFES NESNILSSTSQAGASTRLGADNFADPDEFITRSHWQRSTSSDRCTDPTCGKSLGSINGSINCRKCGKLFCEEHTM YQMKLSRSANHEPVRGYWSRVCETCYKSREGYNDHTGVSVDHTAMFTELRRKRVERQKLEVSRLEKRLSKLTNLL ADAPTTLATSNGGSLLAPVSSFMGQKDGRKLLEQSVVTWEEDEAVSKCPFCQQEFGSWTFRRHHCRICGRVVCAD PLTACSSEISLNIKSPPSPRTEKALTNGESDQLHVNIRMYQRAYETLCQFERGIRLLLPSFHRVLMALQPSRLSN GETDLSKPPPTHAQIQEAAKIRKRLIDSFGKYGAAAKRMRNLQTDKPSQKRLQEAVYTYASGFLHTNMLPLKSLP QMLRARSTASPMGRYISTPTHSASNLRHTELANSDVDSQAPSDEASTVVSQLESEEKELKERLAVLQEQKFLVQD MMRMATGARRFEEASALSRNIKELEGEIDELSSRVDQVEQRWEGVYGNGTTPA* |
Coding | >OphauB2|2188 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTCGGCAGCGGCAAAGGCCTGGCGCCGCCGATATCGACTCCG TCGGCTGCCCCCCGAGCTCGCAGTCCCTTTGCGCCGTCGGATAGCTCCGTTTCCCTCGGCTCGCACTCGCTTTCG CCGCCTGTCAGCATCTCTCTTACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGTACCGCTGCCCCGTCGACGGACCTCGTCTGTCCCATTTGTAACGAGGAAATGGTGACGCTGTTGCAGCTCAAT CGCCATATTGACGACAATCACCAGGAGCTGCCTGAGCATGAGCAGAACGAAGTCAACACGTGGTTCGACAAGCAA GTCCTCAAGGCCAAGCGTTTCCAGCCCCTGTCTCTCATCAACCAGAAGCTTCGGGGACTAGACGTATTCGAGTCC AACGAGTCCAATATTCTTTCCTCGACGTCTCAAGCTGGGGCGAGCACCAGACTGGGAGCCGACAACTTTGCCGAC CCGGATGAATTCATCACAAGAAGCCATTGGCAGCGATCCACGAGCTCCGATCGATGCACAGATCCCACCTGCGGC AAGAGCCTGGGCTCCATTAATGGCAGCATCAACTGTCGAAAATGCGGCAAGTTGTTCTGCGAAGAACACACCATG TATCAAATGAAACTCAGCAGAAGCGCCAACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGC TACAAATCCAGAGAGGGCTACAATGACCACACTGGCGTCTCAGTCGACCACACAGCCATGTTTACGGAGTTGAGA CGAAAAAGGGTAGAGCGACAAAAGCTGGAAGTATCACGGCTTGAAAAGCGCTTGAGCAAGCTGACCAATCTTTTG GCCGACGCTCCAACCACCTTGGCCACTTCAAACGGGGGCTCACTCTTGGCACCCGTCTCGTCATTTATGGGCCAA AAAGACGGCCGTAAATTACTTGAGCAATCCGTCGTGACGTGGGAGGAGGATGAAGCGGTATCAAAGTGCCCCTTT TGTCAGCAAGAGTTTGGTTCCTGGACATTTCGGCGCCACCATTGCCGCATATGCGGCCGTGTCGTGTGCGCAGAC CCTCTTACAGCCTGCTCGTCTGAAATCAGCTTAAACATCAAGAGCCCCCCAAGCCCCAGGACCGAAAAGGCATTG ACCAATGGAGAGAGCGATCAACTACACGTCAACATTAGGATGTATCAGCGAGCATACGAGACTTTGTGCCAATTC GAGCGCGGCATTCGTCTACTCCTGCCCTCGTTTCACCGCGTTCTCATGGCTCTACAACCCAGCAGATTGAGCAAT GGAGAAACAGATTTGAGCAAGCCGCCTCCAACGCACGCGCAGATTCAAGAAGCAGCCAAAATACGGAAACGCCTG ATTGACAGTTTTGGCAAATATGGCGCTGCGGCAAAGAGGATGCGCAATCTCCAGACGGACAAGCCGTCTCAAAAG AGACTACAAGAAGCCGTCTACACCTATGCCAGCGGCTTTTTGCACACAAACATGCTACCACTCAAGAGCCTGCCA CAGATGCTGCGCGCACGTTCGACAGCCTCTCCCATGGGACGCTACATCTCCACGCCGACTCACTCAGCCTCAAAT TTGCGGCACACGGAGCTTGCCAACTCGGACGTGGACTCGCAAGCGCCCAGCGACGAGGCCAGCACCGTTGTCAGC CAGCTTGAGTCGGAAGAAAAGGAGCTCAAGGAGCGCTTGGCAGTGCTCCAGGAACAAAAGTTCTTGGTGCAAGAC ATGATGCGCATGGCCACGGGCGCGCGTCGCTTTGAAGAGGCGAGTGCCCTTTCGCGCAACATCAAGGAGCTCGAG GGCGAGATTGATGAGCTGAGCTCAAGGGTGGACCAAGTCGAGCAAAGGTGGGAGGGCGTCTATGGTAATGGCACC ACACCTGCTTGA |
Transcript | >OphauB2|2188 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTCGGCAGCGGCAAAGGCCTGGCGCCGCCGATATCGACTCCG TCGGCTGCCCCCCGAGCTCGCAGTCCCTTTGCGCCGTCGGATAGCTCCGTTTCCCTCGGCTCGCACTCGCTTTCG CCGCCTGTCAGCATCTCTCTTACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGTACCGCTGCCCCGTCGACGGACCTCGTCTGTCCCATTTGTAACGAGGAAATGGTGACGCTGTTGCAGCTCAAT CGCCATATTGACGACAATCACCAGGAGCTGCCTGAGCATGAGCAGAACGAAGTCAACACGTGGTTCGACAAGCAA GTCCTCAAGGCCAAGCGTTTCCAGCCCCTGTCTCTCATCAACCAGAAGCTTCGGGGACTAGACGTATTCGAGTCC AACGAGTCCAATATTCTTTCCTCGACGTCTCAAGCTGGGGCGAGCACCAGACTGGGAGCCGACAACTTTGCCGAC CCGGATGAATTCATCACAAGAAGCCATTGGCAGCGATCCACGAGCTCCGATCGATGCACAGATCCCACCTGCGGC AAGAGCCTGGGCTCCATTAATGGCAGCATCAACTGTCGAAAATGCGGCAAGTTGTTCTGCGAAGAACACACCATG TATCAAATGAAACTCAGCAGAAGCGCCAACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGC TACAAATCCAGAGAGGGCTACAATGACCACACTGGCGTCTCAGTCGACCACACAGCCATGTTTACGGAGTTGAGA CGAAAAAGGGTAGAGCGACAAAAGCTGGAAGTATCACGGCTTGAAAAGCGCTTGAGCAAGCTGACCAATCTTTTG GCCGACGCTCCAACCACCTTGGCCACTTCAAACGGGGGCTCACTCTTGGCACCCGTCTCGTCATTTATGGGCCAA AAAGACGGCCGTAAATTACTTGAGCAATCCGTCGTGACGTGGGAGGAGGATGAAGCGGTATCAAAGTGCCCCTTT TGTCAGCAAGAGTTTGGTTCCTGGACATTTCGGCGCCACCATTGCCGCATATGCGGCCGTGTCGTGTGCGCAGAC CCTCTTACAGCCTGCTCGTCTGAAATCAGCTTAAACATCAAGAGCCCCCCAAGCCCCAGGACCGAAAAGGCATTG ACCAATGGAGAGAGCGATCAACTACACGTCAACATTAGGATGTATCAGCGAGCATACGAGACTTTGTGCCAATTC GAGCGCGGCATTCGTCTACTCCTGCCCTCGTTTCACCGCGTTCTCATGGCTCTACAACCCAGCAGATTGAGCAAT GGAGAAACAGATTTGAGCAAGCCGCCTCCAACGCACGCGCAGATTCAAGAAGCAGCCAAAATACGGAAACGCCTG ATTGACAGTTTTGGCAAATATGGCGCTGCGGCAAAGAGGATGCGCAATCTCCAGACGGACAAGCCGTCTCAAAAG AGACTACAAGAAGCCGTCTACACCTATGCCAGCGGCTTTTTGCACACAAACATGCTACCACTCAAGAGCCTGCCA CAGATGCTGCGCGCACGTTCGACAGCCTCTCCCATGGGACGCTACATCTCCACGCCGACTCACTCAGCCTCAAAT TTGCGGCACACGGAGCTTGCCAACTCGGACGTGGACTCGCAAGCGCCCAGCGACGAGGCCAGCACCGTTGTCAGC CAGCTTGAGTCGGAAGAAAAGGAGCTCAAGGAGCGCTTGGCAGTGCTCCAGGAACAAAAGTTCTTGGTGCAAGAC ATGATGCGCATGGCCACGGGCGCGCGTCGCTTTGAAGAGGCGAGTGCCCTTTCGCGCAACATCAAGGAGCTCGAG GGCGAGATTGATGAGCTGAGCTCAAGGGTGGACCAAGTCGAGCAAAGGTGGGAGGGCGTCTATGGTAATGGCACC ACACCTGCTTGA |
Gene | >OphauB2|2188 ATGTCTGGCCGGAGGCTCGGGGGCGGCCGCATCCTCGGCAGCGGCAAAGGCCTGGCGCCGCCGATATCGACTCCG TCGGCTGCCCCCCGAGCTCGCAGTCCCTTTGCGCCGTCGGATAGCTCCGTTTCCCTCGGCTCGCACTCGCTTTCG CCGCCTGTCAGCATCTCTCTTACCGACCCGGGTCCGGACATTGGCTCCAGCGTCAGTCTGGGCACTCAGGCCAAG GGTACCGCTGCCCCGTCGACGGACCTCGTCTGTCCCATTTGTAACGAGGAAATGGCATGTGTTGCTCGCTTGCAT GGCTGCGGCGTCGTGCTGACCTGATGCTCGCAGGTGACGCTGTTGCAGCTCAATCGCCATATTGACGACAATCAC CAGGAGCTGCCTGAGCATGAGCAGAACGAAGTCAACACGTGGTTCGACAAGCAAGTCCTCAAGGCCAAGCGTTTC CAGCCCCTGTCTCTCATCAACCAGAAGCTTCGGGGACTAGACGTATTCGAGTCCAACGAGTCCAATATTCTTTCC TCGACGTCTCAAGCTGGGGCGAGCACCAGACTGGGAGCCGACAACTTTGCCGACCCGGATGAATTCATCACAAGA AGCCATTGGCAGCGATCCACGAGCTCCGATCGATGCACAGATCCCACCTGCGGCAAGAGCCTGGGCTCCATTAAT GGCAGCATCAACTGTCGAAAATGCGGCAAGTTGTTCTGCGAAGAACACACCATGTATCAAATGAAACTCAGCAGA AGCGCCAACCACGAGCCTGTCAGGGGCTACTGGTCCCGCGTCTGCGAGACTTGCTACAAATCCAGAGAGGGCTAC AATGACCACACTGGCGTCTCAGTCGACCACACAGCCATGTTTACGGAGTTGAGACGAAAAAGGGTAGAGCGACAA AAGCTGGAAGTATCACGGCTTGAAAAGCGCTTGAGCAAGCTGACCAATCTTTTGGCCGACGCTCCAACCACCTTG GCCACTTCAAACGGGGGCTCACTCTTGGCACCCGTCTCGTCATTTATGGGCCAAAAAGACGGCCGTAAATTACTT GAGCAATCCGTCGTGACGTGGGAGGAGGATGAAGCGGTATCAAAGTGCCCCTTTTGTCAGCAAGAGTTTGGTTCC TGGACATTTCGGCGCCACCATTGCCGCATATGCGGCCGTGTCGTGTGCGCAGACCCTCTTACAGCCTGCTCGTCT GAAATCAGCTTAAACATCAAGAGCCGTGAGTTTGACTTTGATGATTCAGTCAAGACGACACTAACTCGCCCCAGC CCCAAGCCCCAGGACCGAAAAGGCATTGACCAATGGAGAGAGCGATCAACTACACGTCAACATTAGGATGTGTAG GGAATGCAATCATACAGTTTTCTCCTATCGAGATTTTGCCGCCTCGCTGCTTTACAAACCTCCAGATCAGCGAGC ATACGAGACTTTGTGCCAATTCGAGCGCGGCATTCGTCTACTCCTGCCCTCGTTTCACCGCGTTCTCATGGCTCT ACAACCCAGCAGATTGAGCAATGGAGAAACAGATTTGAGCAAGCCGCCTCCAACGCACGCGCAGATTCAAGAAGC AGCCAAAATACGGAAACGCCTGATTGACAGTTTTGGCAAATATGGCGCTGCGGCAAAGAGGATGCGCAATCTCCA GACGGACAAGCCGTCTCAAAAGAGACTACAAGAAGCCGTCTACACCTATGCCAGCGGCTTTTTGCACACAAACAT GCTACCACTCAAGAGCCTGCCACAGATGCTGCGCGCACGTTCGACAGCCTCTCCCATGGGACGCTACATCTCCAC GCCGACTCACTCAGCCTCAAATTTGCGGCACACGGAGCTTGCCAACTCGGACGTGGACTCGCAAGCGCCCAGCGA CGAGGCCAGCACCGTTGTCAGCCAGCTTGAGTCGGAAGAAAAGGAGCTCAAGGAGCGCTTGGCAGTGCTCCAGGA ACAAAAGTTCTTGGTGCAAGACATGATGCGCATGGCCACGGGCGCGCGTCGCTTTGAAGAGGCGAGTGCCCTTTC GCGCAACATCAAGGAGCTCGAGGGCGAGATTGATGAGCTGAGCTCAAGGGTGGACCAAGTCGAGCAAAGGTGGGA GGGCGTCTATGGTAATGGCACCACACCTGCTTGA |