Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2102
Gene name
LocationContig_163:42..1431
Strand+
Gene length (bp)1389
Transcript length (bp)1389
Coding sequence length (bp)1389
Protein length (aa) 463

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01300 Sua5_yciO_yrdC Telomere recombination 3.7E-15 42 97
PF01300 Sua5_yciO_yrdC Telomere recombination 7.5E-33 146 269
PF03481 Sua5_C Threonylcarbamoyl-AMP synthase, C-terminal domain 6.9E-29 290 458

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94530|SUA5_SCHPO Threonylcarbamoyl-AMP synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sua5 PE=3 SV=1 27 458 2.0E-103
sp|P32579|SUA5_YEAST Threonylcarbamoyl-AMP synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUA5 PE=1 SV=1 1 460 7.0E-79
sp|P39153|SUA5_BACSU Threonylcarbamoyl-AMP synthase OS=Bacillus subtilis (strain 168) GN=ywlC PE=1 SV=1 23 457 3.0E-67
sp|Q9UYB2|SUA5_PYRAB Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=sua5 PE=1 SV=1 22 457 4.0E-64
sp|Q970S6|SUA5_SULTO Threonylcarbamoyl-AMP synthase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=sua5 PE=1 SV=1 36 457 3.0E-62
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Swissprot ID Swissprot Description Start End E-value
sp|O94530|SUA5_SCHPO Threonylcarbamoyl-AMP synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sua5 PE=3 SV=1 27 458 2.0E-103
sp|P32579|SUA5_YEAST Threonylcarbamoyl-AMP synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUA5 PE=1 SV=1 1 460 7.0E-79
sp|P39153|SUA5_BACSU Threonylcarbamoyl-AMP synthase OS=Bacillus subtilis (strain 168) GN=ywlC PE=1 SV=1 23 457 3.0E-67
sp|Q9UYB2|SUA5_PYRAB Threonylcarbamoyl-AMP synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=sua5 PE=1 SV=1 22 457 4.0E-64
sp|Q970S6|SUA5_SULTO Threonylcarbamoyl-AMP synthase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=sua5 PE=1 SV=1 36 457 3.0E-62
sp|P9WGC9|TSAC_MYCTU Putative threonylcarbamoyl-AMP synthase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv1301 PE=1 SV=1 47 281 2.0E-16
sp|P9WGC8|TSAC_MYCTO Putative threonylcarbamoyl-AMP synthase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT1340 PE=3 SV=1 47 281 2.0E-16
sp|Q60369|TSAC_METJA Putative threonylcarbamoyl-AMP synthase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0062 PE=3 SV=1 30 279 2.0E-11
sp|Q0VTD8|TSAC_ALCBS Threonylcarbamoyl-AMP synthase OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) GN=tsaC PE=3 SV=1 33 268 3.0E-11
sp|P45831|TSAC_MYCLE Putative threonylcarbamoyl-AMP synthase OS=Mycobacterium leprae (strain TN) GN=ML1136 PE=3 SV=1 26 281 9.0E-11
sp|A8FP81|TSAC_SHESH Threonylcarbamoyl-AMP synthase OS=Shewanella sediminis (strain HAW-EB3) GN=tsaC PE=3 SV=1 35 259 4.0E-09
sp|B2FIS1|TSAC_STRMK Threonylcarbamoyl-AMP synthase OS=Stenotrophomonas maltophilia (strain K279a) GN=tsaC PE=3 SV=1 30 222 3.0E-08
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GO

GO Term Description Terminal node
GO:0003725 double-stranded RNA binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0003723 RNA binding No
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2102
MKTRIMAVPREPLGHFINGLETWVVDTRAEAMLHEAAQQLRHGDVPVGFPTETVYGLGADATRGSAVEGIYRAKG
RPVDNPLIVHVADLAMLRDLLGGGEEERGRDVGGGEEGDVKNGKDATNGSQEEIKHGDKTGDTTTSITSLIPPRY
LALIQRFWPGPLTILLPIPPAHHRPRLRLAPQVTAGLSTFGVRMPSSPLALTLIKLAGVPLAAPSANASTRPSPT
TAQHVRDDLDGRISLVLDGGPCSVGVESTVVDGLCEPPVVLRPGGISTHDICSCAGWGNVVAAYRDGSDEAVPRA
PGMKYKHYSPRARVVLYEASRRDAEGGVVAEEIVSLCLAAGWSKIGVIRTRRWGMGAGLVSGPMAQDEAAAVRLH
DEGLHSAAPITVFSGSMHDARGNKVGQVYDVHLGADTRSIAQGLFAALRELDARGADLILVDGIDDEHDMAAAVM
NRLRKAASETRR*
Coding >OphauB2|2102
ATGAAGACTCGCATCATGGCCGTGCCGCGCGAGCCTCTGGGCCACTTTATCAACGGGCTAGAAACATGGGTGGTG
GACACGCGGGCCGAGGCGATGCTGCACGAGGCGGCGCAGCAGTTGCGGCACGGAGACGTGCCGGTAGGGTTTCCG
ACAGAGACGGTGTATGGGCTCGGGGCGGATGCGACGAGGGGCAGTGCGGTGGAGGGGATATACAGGGCAAAAGGG
CGGCCGGTGGATAATCCGCTGATTGTGCATGTTGCGGATTTGGCAATGTTGAGGGATTTGTTGGGCGGTGGGGAA
GAAGAGAGGGGGAGGGATGTTGGTGGTGGTGAAGAAGGAGATGTGAAGAATGGCAAAGACGCGACAAATGGCAGC
CAAGAAGAAATAAAGCATGGCGACAAGACTGGCGACACCACGACGAGCATCACCTCATTGATTCCTCCTCGCTAC
CTCGCCCTAATACAGCGCTTCTGGCCCGGCCCTCTCACCATACTCCTCCCCATTCCCCCCGCGCACCACCGCCCC
CGCCTCCGCCTCGCCCCCCAAGTCACCGCCGGCCTCTCGACATTTGGCGTGCGCATGCCCTCGTCGCCCCTTGCC
CTCACCCTCATCAAGCTAGCTGGGGTGCCGCTCGCCGCGCCCTCTGCCAATGCATCCACGCGGCCCTCGCCCACC
ACGGCGCAGCACGTGCGCGACGACCTCGACGGCCGCATCAGCCTCGTGCTCGACGGCGGGCCGTGCAGCGTGGGC
GTGGAAAGCACCGTGGTCGACGGGCTGTGCGAGCCGCCCGTCGTGTTGCGGCCAGGCGGCATTTCCACCCACGAC
ATTTGCAGCTGTGCCGGCTGGGGCAACGTGGTGGCTGCGTATAGAGACGGGAGCGACGAGGCGGTGCCGCGCGCG
CCGGGAATGAAGTATAAGCACTATAGCCCCAGGGCGCGCGTGGTGTTGTACGAGGCGTCGAGGCGGGACGCAGAG
GGGGGTGTGGTGGCCGAGGAGATTGTGTCGTTGTGTTTGGCGGCTGGCTGGTCAAAGATTGGCGTCATACGCACC
AGGCGGTGGGGGATGGGCGCGGGTCTGGTGTCGGGGCCCATGGCGCAAGACGAGGCGGCTGCGGTGCGTTTGCAT
GACGAGGGTCTACACTCGGCGGCGCCAATAACCGTCTTTAGCGGGAGCATGCACGACGCACGGGGGAACAAAGTT
GGCCAAGTTTATGATGTTCATCTCGGCGCCGATACAAGGAGCATTGCCCAGGGCCTGTTTGCGGCCTTGAGGGAG
CTGGATGCACGCGGCGCAGACTTGATTCTAGTAGATGGTATAGACGACGAGCACGACATGGCTGCGGCCGTCATG
AACCGGTTGCGCAAGGCAGCCTCTGAGACGAGACGATGA
Transcript >OphauB2|2102
ATGAAGACTCGCATCATGGCCGTGCCGCGCGAGCCTCTGGGCCACTTTATCAACGGGCTAGAAACATGGGTGGTG
GACACGCGGGCCGAGGCGATGCTGCACGAGGCGGCGCAGCAGTTGCGGCACGGAGACGTGCCGGTAGGGTTTCCG
ACAGAGACGGTGTATGGGCTCGGGGCGGATGCGACGAGGGGCAGTGCGGTGGAGGGGATATACAGGGCAAAAGGG
CGGCCGGTGGATAATCCGCTGATTGTGCATGTTGCGGATTTGGCAATGTTGAGGGATTTGTTGGGCGGTGGGGAA
GAAGAGAGGGGGAGGGATGTTGGTGGTGGTGAAGAAGGAGATGTGAAGAATGGCAAAGACGCGACAAATGGCAGC
CAAGAAGAAATAAAGCATGGCGACAAGACTGGCGACACCACGACGAGCATCACCTCATTGATTCCTCCTCGCTAC
CTCGCCCTAATACAGCGCTTCTGGCCCGGCCCTCTCACCATACTCCTCCCCATTCCCCCCGCGCACCACCGCCCC
CGCCTCCGCCTCGCCCCCCAAGTCACCGCCGGCCTCTCGACATTTGGCGTGCGCATGCCCTCGTCGCCCCTTGCC
CTCACCCTCATCAAGCTAGCTGGGGTGCCGCTCGCCGCGCCCTCTGCCAATGCATCCACGCGGCCCTCGCCCACC
ACGGCGCAGCACGTGCGCGACGACCTCGACGGCCGCATCAGCCTCGTGCTCGACGGCGGGCCGTGCAGCGTGGGC
GTGGAAAGCACCGTGGTCGACGGGCTGTGCGAGCCGCCCGTCGTGTTGCGGCCAGGCGGCATTTCCACCCACGAC
ATTTGCAGCTGTGCCGGCTGGGGCAACGTGGTGGCTGCGTATAGAGACGGGAGCGACGAGGCGGTGCCGCGCGCG
CCGGGAATGAAGTATAAGCACTATAGCCCCAGGGCGCGCGTGGTGTTGTACGAGGCGTCGAGGCGGGACGCAGAG
GGGGGTGTGGTGGCCGAGGAGATTGTGTCGTTGTGTTTGGCGGCTGGCTGGTCAAAGATTGGCGTCATACGCACC
AGGCGGTGGGGGATGGGCGCGGGTCTGGTGTCGGGGCCCATGGCGCAAGACGAGGCGGCTGCGGTGCGTTTGCAT
GACGAGGGTCTACACTCGGCGGCGCCAATAACCGTCTTTAGCGGGAGCATGCACGACGCACGGGGGAACAAAGTT
GGCCAAGTTTATGATGTTCATCTCGGCGCCGATACAAGGAGCATTGCCCAGGGCCTGTTTGCGGCCTTGAGGGAG
CTGGATGCACGCGGCGCAGACTTGATTCTAGTAGATGGTATAGACGACGAGCACGACATGGCTGCGGCCGTCATG
AACCGGTTGCGCAAGGCAGCCTCTGAGACGAGACGATGA
Gene >OphauB2|2102
ATGAAGACTCGCATCATGGCCGTGCCGCGCGAGCCTCTGGGCCACTTTATCAACGGGCTAGAAACATGGGTGGTG
GACACGCGGGCCGAGGCGATGCTGCACGAGGCGGCGCAGCAGTTGCGGCACGGAGACGTGCCGGTAGGGTTTCCG
ACAGAGACGGTGTATGGGCTCGGGGCGGATGCGACGAGGGGCAGTGCGGTGGAGGGGATATACAGGGCAAAAGGG
CGGCCGGTGGATAATCCGCTGATTGTGCATGTTGCGGATTTGGCAATGTTGAGGGATTTGTTGGGCGGTGGGGAA
GAAGAGAGGGGGAGGGATGTTGGTGGTGGTGAAGAAGGAGATGTGAAGAATGGCAAAGACGCGACAAATGGCAGC
CAAGAAGAAATAAAGCATGGCGACAAGACTGGCGACACCACGACGAGCATCACCTCATTGATTCCTCCTCGCTAC
CTCGCCCTAATACAGCGCTTCTGGCCCGGCCCTCTCACCATACTCCTCCCCATTCCCCCCGCGCACCACCGCCCC
CGCCTCCGCCTCGCCCCCCAAGTCACCGCCGGCCTCTCGACATTTGGCGTGCGCATGCCCTCGTCGCCCCTTGCC
CTCACCCTCATCAAGCTAGCTGGGGTGCCGCTCGCCGCGCCCTCTGCCAATGCATCCACGCGGCCCTCGCCCACC
ACGGCGCAGCACGTGCGCGACGACCTCGACGGCCGCATCAGCCTCGTGCTCGACGGCGGGCCGTGCAGCGTGGGC
GTGGAAAGCACCGTGGTCGACGGGCTGTGCGAGCCGCCCGTCGTGTTGCGGCCAGGCGGCATTTCCACCCACGAC
ATTTGCAGCTGTGCCGGCTGGGGCAACGTGGTGGCTGCGTATAGAGACGGGAGCGACGAGGCGGTGCCGCGCGCG
CCGGGAATGAAGTATAAGCACTATAGCCCCAGGGCGCGCGTGGTGTTGTACGAGGCGTCGAGGCGGGACGCAGAG
GGGGGTGTGGTGGCCGAGGAGATTGTGTCGTTGTGTTTGGCGGCTGGCTGGTCAAAGATTGGCGTCATACGCACC
AGGCGGTGGGGGATGGGCGCGGGTCTGGTGTCGGGGCCCATGGCGCAAGACGAGGCGGCTGCGGTGCGTTTGCAT
GACGAGGGTCTACACTCGGCGGCGCCAATAACCGTCTTTAGCGGGAGCATGCACGACGCACGGGGGAACAAAGTT
GGCCAAGTTTATGATGTTCATCTCGGCGCCGATACAAGGAGCATTGCCCAGGGCCTGTTTGCGGCCTTGAGGGAG
CTGGATGCACGCGGCGCAGACTTGATTCTAGTAGATGGTATAGACGACGAGCACGACATGGCTGCGGCCGTCATG
AACCGGTTGCGCAAGGCAGCCTCTGAGACGAGACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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