Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|210
Gene name
LocationContig_10:132318..133746
Strand-
Gene length (bp)1428
Transcript length (bp)1428
Coding sequence length (bp)1428
Protein length (aa) 476

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01062 Bestrophin Bestrophin, RFP-TM, chloride channel 3.6E-45 68 388

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q8YSU5|Y2987_NOSS1 UPF0187 protein alr2987 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2987 PE=3 SV=1 62 401 1.0E-29
sp|P72926|Y1024_SYNY3 UPF0187 protein sll1024 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1024 PE=3 SV=2 70 396 2.0E-29
sp|Q8ZPI0|YNEE_SALTY UPF0187 protein YneE OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yneE PE=3 SV=2 75 408 1.0E-26
sp|Q8Z706|YNEE_SALTI UPF0187 protein YneE OS=Salmonella typhi GN=yneE PE=3 SV=2 75 408 1.0E-26
sp|P76146|YNEE_ECOLI UPF0187 protein YneE OS=Escherichia coli (strain K12) GN=yneE PE=3 SV=2 75 395 6.0E-23
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q8YSU5|Y2987_NOSS1 UPF0187 protein alr2987 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2987 PE=3 SV=1 62 401 1.0E-29
sp|P72926|Y1024_SYNY3 UPF0187 protein sll1024 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll1024 PE=3 SV=2 70 396 2.0E-29
sp|Q8ZPI0|YNEE_SALTY UPF0187 protein YneE OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yneE PE=3 SV=2 75 408 1.0E-26
sp|Q8Z706|YNEE_SALTI UPF0187 protein YneE OS=Salmonella typhi GN=yneE PE=3 SV=2 75 408 1.0E-26
sp|P76146|YNEE_ECOLI UPF0187 protein YneE OS=Escherichia coli (strain K12) GN=yneE PE=3 SV=2 75 395 6.0E-23
sp|Q8XAZ3|YNEE_ECO57 UPF0187 protein YneE OS=Escherichia coli O157:H7 GN=yneE PE=3 SV=2 75 395 7.0E-23
sp|Q98E66|Y4386_RHILO UPF0187 protein mll4386 OS=Rhizobium loti (strain MAFF303099) GN=mll4386 PE=3 SV=1 69 389 1.0E-18
sp|Q8XTY1|Y3414_RALSO UPF0187 protein RSc3414 OS=Ralstonia solanacearum (strain GMI1000) GN=RSc3414 PE=3 SV=1 295 391 7.0E-08
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GO

GO Term Description Terminal node
GO:0005254 chloride channel activity Yes
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0005253 anion channel activity No
GO:0008509 anion transmembrane transporter activity No
GO:0003674 molecular_function No
GO:0015103 inorganic anion transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0015267 channel activity No
GO:0015108 chloride transmembrane transporter activity No
GO:0022803 passive transmembrane transporter activity No
GO:0005216 ion channel activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 77 99 22
2 104 126 22
3 314 336 22
4 351 368 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|210
MAAQPAHKEDDCQPPKLSSVEIPLDRICSPKSPAVAIAPLTCHRHRRGSIDLDDYFTGPRDISKHSKWPMFLQLH
GSILPKLILPLLFITGWATAVTVVSQRVYNLGVNSVLLTITGFVVGLCLSFRNSTAYERYTEGRKYWAALVQASH
VLGRVFWIHAGERADQDAREQMLNKISSMNLLLAFAVALKHNLRFEPYTAYPDLQHLIGHLHTFAKDATAAQGQC
QSVAPGKRRNFFRGVGEYLGVSFAASNPRKTLKRASHPLGNLPLEILNHVAVTIDMLVANEQLRVPMQQTLAYNH
LTMLNDVLTGTERILCTPLPIAYTIAISQITWLYVILLPFQLLPLLDWKAIPASVAAGYIILGLLLIGQEVENPF
GQDVNDLPLDNYCEQIASDLDVIASFDKREPEAFLRNSNNMPLYPVSTAPVDVWMQRSEDRLRRAIQTKPAKTFE
WRKWGGKKGSAESSAATSVAGDHLV*
Coding >OphauB2|210
ATGGCTGCTCAACCCGCGCATAAAGAAGACGACTGCCAGCCGCCAAAGCTGAGCAGCGTCGAAATCCCACTCGAC
CGAATCTGCTCGCCCAAGTCGCCAGCCGTGGCCATTGCGCCTCTGACCTGCCACCGCCACCGGCGCGGCTCCATC
GACCTCGACGACTACTTTACCGGCCCGCGGGACATTTCCAAGCACTCCAAGTGGCCCATGTTTCTGCAGCTGCAC
GGCAGCATCCTGCCCAAGCTCATTCTGCCGCTCCTCTTCATCACGGGCTGGGCCACGGCGGTGACGGTTGTGTCG
CAGCGCGTCTACAACCTGGGCGTCAACTCGGTCCTCCTCACCATTACCGGCTTCGTTGTCGGTCTCTGCCTCTCG
TTTCGCAACTCGACCGCCTATGAGCGCTACACCGAGGGCCGCAAGTACTGGGCGGCGCTGGTGCAGGCGTCGCAT
GTGCTGGGCCGCGTCTTTTGGATCCATGCGGGCGAGCGCGCTGACCAGGACGCGCGCGAGCAAATGCTCAACAAG
ATTAGCTCCATGAACCTGCTGCTGGCCTTTGCTGTGGCGCTCAAGCATAATCTGCGCTTTGAGCCGTATACCGCC
TATCCCGACCTGCAGCATCTCATTGGGCATTTGCATACTTTTGCAAAGGACGCCACGGCTGCGCAGGGCCAGTGT
CAGTCCGTGGCGCCTGGCAAGCGGCGCAATTTCTTTCGCGGCGTGGGCGAATACTTGGGCGTGTCCTTTGCCGCC
AGTAATCCGCGCAAGACGCTCAAGAGGGCTTCACACCCCCTGGGCAACCTGCCGCTCGAGATTCTCAACCACGTG
GCCGTCACCATTGACATGCTGGTGGCGAATGAGCAGCTGCGCGTGCCCATGCAGCAGACGCTGGCCTACAACCAT
CTCACCATGCTAAACGATGTCTTGACGGGCACCGAGCGCATTCTCTGCACCCCGCTGCCCATTGCCTACACCATT
GCCATTTCCCAAATCACCTGGCTCTACGTCATCCTCCTGCCCTTCCAGCTGCTGCCCCTGCTCGACTGGAAGGCC
ATTCCCGCCAGCGTGGCTGCTGGCTACATCATCCTCGGCCTGCTGCTCATAGGCCAAGAGGTGGAAAACCCCTTT
GGCCAAGACGTCAATGACTTGCCCCTCGACAACTACTGCGAGCAGATTGCCTCGGACCTGGATGTCATTGCCTCG
TTTGACAAGCGCGAGCCCGAGGCCTTTCTGCGGAATAGCAACAATATGCCGCTGTATCCTGTCAGCACCGCGCCA
GTCGACGTGTGGATGCAGCGCAGCGAGGATAGGCTGCGTAGGGCCATTCAGACCAAGCCGGCAAAGACGTTTGAA
TGGAGGAAATGGGGTGGCAAAAAGGGCAGTGCGGAGAGTAGTGCGGCGACGAGCGTTGCGGGTGATCACCTGGTG
TGA
Transcript >OphauB2|210
ATGGCTGCTCAACCCGCGCATAAAGAAGACGACTGCCAGCCGCCAAAGCTGAGCAGCGTCGAAATCCCACTCGAC
CGAATCTGCTCGCCCAAGTCGCCAGCCGTGGCCATTGCGCCTCTGACCTGCCACCGCCACCGGCGCGGCTCCATC
GACCTCGACGACTACTTTACCGGCCCGCGGGACATTTCCAAGCACTCCAAGTGGCCCATGTTTCTGCAGCTGCAC
GGCAGCATCCTGCCCAAGCTCATTCTGCCGCTCCTCTTCATCACGGGCTGGGCCACGGCGGTGACGGTTGTGTCG
CAGCGCGTCTACAACCTGGGCGTCAACTCGGTCCTCCTCACCATTACCGGCTTCGTTGTCGGTCTCTGCCTCTCG
TTTCGCAACTCGACCGCCTATGAGCGCTACACCGAGGGCCGCAAGTACTGGGCGGCGCTGGTGCAGGCGTCGCAT
GTGCTGGGCCGCGTCTTTTGGATCCATGCGGGCGAGCGCGCTGACCAGGACGCGCGCGAGCAAATGCTCAACAAG
ATTAGCTCCATGAACCTGCTGCTGGCCTTTGCTGTGGCGCTCAAGCATAATCTGCGCTTTGAGCCGTATACCGCC
TATCCCGACCTGCAGCATCTCATTGGGCATTTGCATACTTTTGCAAAGGACGCCACGGCTGCGCAGGGCCAGTGT
CAGTCCGTGGCGCCTGGCAAGCGGCGCAATTTCTTTCGCGGCGTGGGCGAATACTTGGGCGTGTCCTTTGCCGCC
AGTAATCCGCGCAAGACGCTCAAGAGGGCTTCACACCCCCTGGGCAACCTGCCGCTCGAGATTCTCAACCACGTG
GCCGTCACCATTGACATGCTGGTGGCGAATGAGCAGCTGCGCGTGCCCATGCAGCAGACGCTGGCCTACAACCAT
CTCACCATGCTAAACGATGTCTTGACGGGCACCGAGCGCATTCTCTGCACCCCGCTGCCCATTGCCTACACCATT
GCCATTTCCCAAATCACCTGGCTCTACGTCATCCTCCTGCCCTTCCAGCTGCTGCCCCTGCTCGACTGGAAGGCC
ATTCCCGCCAGCGTGGCTGCTGGCTACATCATCCTCGGCCTGCTGCTCATAGGCCAAGAGGTGGAAAACCCCTTT
GGCCAAGACGTCAATGACTTGCCCCTCGACAACTACTGCGAGCAGATTGCCTCGGACCTGGATGTCATTGCCTCG
TTTGACAAGCGCGAGCCCGAGGCCTTTCTGCGGAATAGCAACAATATGCCGCTGTATCCTGTCAGCACCGCGCCA
GTCGACGTGTGGATGCAGCGCAGCGAGGATAGGCTGCGTAGGGCCATTCAGACCAAGCCGGCAAAGACGTTTGAA
TGGAGGAAATGGGGTGGCAAAAAGGGCAGTGCGGAGAGTAGTGCGGCGACGAGCGTTGCGGGTGATCACCTGGTG
TGA
Gene >OphauB2|210
ATGGCTGCTCAACCCGCGCATAAAGAAGACGACTGCCAGCCGCCAAAGCTGAGCAGCGTCGAAATCCCACTCGAC
CGAATCTGCTCGCCCAAGTCGCCAGCCGTGGCCATTGCGCCTCTGACCTGCCACCGCCACCGGCGCGGCTCCATC
GACCTCGACGACTACTTTACCGGCCCGCGGGACATTTCCAAGCACTCCAAGTGGCCCATGTTTCTGCAGCTGCAC
GGCAGCATCCTGCCCAAGCTCATTCTGCCGCTCCTCTTCATCACGGGCTGGGCCACGGCGGTGACGGTTGTGTCG
CAGCGCGTCTACAACCTGGGCGTCAACTCGGTCCTCCTCACCATTACCGGCTTCGTTGTCGGTCTCTGCCTCTCG
TTTCGCAACTCGACCGCCTATGAGCGCTACACCGAGGGCCGCAAGTACTGGGCGGCGCTGGTGCAGGCGTCGCAT
GTGCTGGGCCGCGTCTTTTGGATCCATGCGGGCGAGCGCGCTGACCAGGACGCGCGCGAGCAAATGCTCAACAAG
ATTAGCTCCATGAACCTGCTGCTGGCCTTTGCTGTGGCGCTCAAGCATAATCTGCGCTTTGAGCCGTATACCGCC
TATCCCGACCTGCAGCATCTCATTGGGCATTTGCATACTTTTGCAAAGGACGCCACGGCTGCGCAGGGCCAGTGT
CAGTCCGTGGCGCCTGGCAAGCGGCGCAATTTCTTTCGCGGCGTGGGCGAATACTTGGGCGTGTCCTTTGCCGCC
AGTAATCCGCGCAAGACGCTCAAGAGGGCTTCACACCCCCTGGGCAACCTGCCGCTCGAGATTCTCAACCACGTG
GCCGTCACCATTGACATGCTGGTGGCGAATGAGCAGCTGCGCGTGCCCATGCAGCAGACGCTGGCCTACAACCAT
CTCACCATGCTAAACGATGTCTTGACGGGCACCGAGCGCATTCTCTGCACCCCGCTGCCCATTGCCTACACCATT
GCCATTTCCCAAATCACCTGGCTCTACGTCATCCTCCTGCCCTTCCAGCTGCTGCCCCTGCTCGACTGGAAGGCC
ATTCCCGCCAGCGTGGCTGCTGGCTACATCATCCTCGGCCTGCTGCTCATAGGCCAAGAGGTGGAAAACCCCTTT
GGCCAAGACGTCAATGACTTGCCCCTCGACAACTACTGCGAGCAGATTGCCTCGGACCTGGATGTCATTGCCTCG
TTTGACAAGCGCGAGCCCGAGGCCTTTCTGCGGAATAGCAACAATATGCCGCTGTATCCTGTCAGCACCGCGCCA
GTCGACGTGTGGATGCAGCGCAGCGAGGATAGGCTGCGTAGGGCCATTCAGACCAAGCCGGCAAAGACGTTTGAA
TGGAGGAAATGGGGTGGCAAAAAGGGCAGTGCGGAGAGTAGTGCGGCGACGAGCGTTGCGGGTGATCACCTGGTG
TGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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