© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2094 |
| Gene name | |
| Location | Contig_162:27296..28819 |
| Strand | + |
| Gene length (bp) | 1523 |
| Transcript length (bp) | 1455 |
| Coding sequence length (bp) | 1455 |
| Protein length (aa) | 485 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04884 | UVB_sens_prot | Vitamin B6 photo-protection and homoeostasis | 1.8E-88 | 80 | 311 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q86K80|RUS1_DICDI | RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1 | 79 | 330 | 4.0E-52 |
| sp|Q84JB8|RUS3_ARATH | Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1 | 84 | 459 | 8.0E-47 |
| sp|Q499P8|RUS1_RAT | RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1 | 84 | 334 | 1.0E-43 |
| sp|Q91W34|RUS1_MOUSE | RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1 | 84 | 334 | 2.0E-42 |
| sp|Q5R8F6|RUS1_PONAB | RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1 | 84 | 331 | 1.0E-39 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q86K80|RUS1_DICDI | RUS1 family protein homolog OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3 SV=1 | 79 | 330 | 4.0E-52 |
| sp|Q84JB8|RUS3_ARATH | Protein root UVB sensitive 3 OS=Arabidopsis thaliana GN=RUS3 PE=2 SV=1 | 84 | 459 | 8.0E-47 |
| sp|Q499P8|RUS1_RAT | RUS1 family protein C16orf58 homolog OS=Rattus norvegicus PE=2 SV=1 | 84 | 334 | 1.0E-43 |
| sp|Q91W34|RUS1_MOUSE | RUS1 family protein C16orf58 homolog OS=Mus musculus PE=1 SV=1 | 84 | 334 | 2.0E-42 |
| sp|Q5R8F6|RUS1_PONAB | RUS1 family protein C16orf58 homolog OS=Pongo abelii PE=2 SV=1 | 84 | 331 | 1.0E-39 |
| sp|Q96GQ5|RUS1_HUMAN | RUS1 family protein C16orf58 OS=Homo sapiens GN=C16orf58 PE=1 SV=2 | 84 | 331 | 3.0E-39 |
| sp|Q7X6P3|RUS1_ARATH | Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana GN=RUS1 PE=1 SV=1 | 88 | 313 | 3.0E-21 |
| sp|B6IDH3|RUS5_ARATH | Protein root UVB sensitive 5 OS=Arabidopsis thaliana GN=RUS5 PE=2 SV=1 | 88 | 331 | 1.0E-19 |
| sp|Q9SJX7|RUS2_ARATH | Protein root UVB sensitive 2, chloroplastic OS=Arabidopsis thaliana GN=RUS2 PE=1 SV=2 | 82 | 345 | 4.0E-19 |
| sp|Q93YU2|RUS6_ARATH | Protein root UVB sensitive 6 OS=Arabidopsis thaliana GN=RUS6 PE=2 SV=1 | 84 | 315 | 8.0E-18 |
| sp|Q67YT8|RUS4_ARATH | Protein root UVB sensitive 4 OS=Arabidopsis thaliana GN=RUS4 PE=2 SV=1 | 94 | 328 | 1.0E-16 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 249 | 266 | 17 |
| 2 | 271 | 293 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2094 MSRRRRHFDVVELYARPSESDKDGKDTLAALINSKQAIDVVEVNKSGQDEKRWRHISAHAVSRVRDEKRQYSVLD IFGGWHQTLLSALLPVGYPGSVSDDYIAYQTYDSLQAFFSTITSLLASRALLKGLGVGDADSSATYALLLTIFKD AVSRVATIVFAHRFGLVIEPEAKRYRFLADLLNDTAFFIELYSPYFVSWTKVLALCTAEALRAICGVAAGASKAA LSLHFAKQDNLSELNAKEASQETAVGLVGLLVGTLVVRVVQNHDTVVYLMIALVFAHLLINYCGVRCVNMVTLNK QRATIIFNSYKTSKIVLTPIQVAQQESILFWDDIICNGDKQPVCRIDFAQSYADAVSVANMGQPAMAVDGPMHTR FVSPFVPGNIAKIKIMLWEGAEAKHAILAWFEAMDTAWSMEKDVPYGDAKDAEKDSLKTIMTTSPSAADDQLWDK LQKMGWNLETGALETGAGTRLRSAKAKRTLGDVE* |
| Coding | >OphauB2|2094 ATGAGTCGTCGCCGTCGCCACTTTGATGTTGTTGAACTGTACGCAAGACCATCCGAGTCTGACAAGGATGGCAAG GACACGCTAGCAGCTCTTATCAACTCCAAGCAGGCCATTGACGTGGTCGAGGTGAATAAATCGGGCCAAGACGAG AAGCGATGGCGCCATATTTCAGCCCACGCCGTCTCCCGCGTACGGGATGAGAAGCGTCAATATTCCGTCTTGGAT ATATTTGGAGGTTGGCATCAGACTTTGCTCTCGGCTCTCCTCCCCGTGGGCTATCCGGGATCTGTCTCGGACGAC TACATAGCATACCAGACCTACGACTCCCTCCAAGCATTCTTCTCCACCATTACCTCCCTTCTAGCCAGCCGAGCC CTACTCAAAGGCCTAGGCGTTGGTGATGCTGACTCGTCAGCCACGTATGCTCTGCTGCTCACCATTTTCAAGGAC GCCGTTTCTCGAGTCGCCACAATTGTTTTCGCTCACCGCTTTGGACTAGTCATTGAGCCCGAGGCCAAGCGATAC CGCTTCTTGGCTGATTTGCTCAATGATACAGCCTTCTTCATTGAATTGTACAGCCCATATTTCGTCTCATGGACC AAGGTGCTTGCTCTATGCACGGCTGAAGCTCTCAGAGCAATTTGTGGCGTGGCCGCGGGCGCCAGCAAGGCCGCC TTGAGCTTGCACTTTGCAAAGCAAGATAATTTGTCCGAACTCAATGCCAAAGAGGCGAGCCAAGAAACGGCTGTC GGCCTCGTTGGTTTACTCGTTGGCACCCTGGTTGTCAGGGTGGTTCAGAACCATGACACGGTTGTCTATCTCATG ATAGCCTTGGTGTTTGCCCATCTCTTGATCAACTACTGCGGTGTCAGATGCGTCAACATGGTGACACTCAATAAG CAGCGAGCAACAATAATATTCAACAGCTACAAAACGTCAAAGATTGTTTTGACGCCCATCCAGGTGGCCCAACAA GAGAGTATCCTTTTCTGGGATGATATTATTTGCAACGGCGACAAGCAACCTGTCTGTCGGATTGATTTTGCCCAA AGCTACGCCGACGCTGTGAGCGTCGCCAACATGGGACAGCCTGCCATGGCTGTGGACGGACCTATGCATACCCGA TTCGTCAGTCCCTTTGTCCCGGGAAATATTGCTAAGATCAAGATTATGCTCTGGGAGGGCGCTGAAGCCAAGCAT GCCATTCTCGCATGGTTTGAGGCAATGGATACAGCTTGGTCAATGGAGAAGGATGTACCGTATGGGGATGCCAAA GATGCAGAAAAAGACTCGTTGAAAACAATTATGACAACTAGTCCCAGTGCCGCAGACGATCAGCTCTGGGACAAG CTGCAAAAGATGGGTTGGAACCTAGAGACTGGTGCTCTGGAAACAGGCGCAGGCACGAGGCTTCGCTCCGCCAAG GCTAAGCGCACGCTAGGCGATGTCGAATGA |
| Transcript | >OphauB2|2094 ATGAGTCGTCGCCGTCGCCACTTTGATGTTGTTGAACTGTACGCAAGACCATCCGAGTCTGACAAGGATGGCAAG GACACGCTAGCAGCTCTTATCAACTCCAAGCAGGCCATTGACGTGGTCGAGGTGAATAAATCGGGCCAAGACGAG AAGCGATGGCGCCATATTTCAGCCCACGCCGTCTCCCGCGTACGGGATGAGAAGCGTCAATATTCCGTCTTGGAT ATATTTGGAGGTTGGCATCAGACTTTGCTCTCGGCTCTCCTCCCCGTGGGCTATCCGGGATCTGTCTCGGACGAC TACATAGCATACCAGACCTACGACTCCCTCCAAGCATTCTTCTCCACCATTACCTCCCTTCTAGCCAGCCGAGCC CTACTCAAAGGCCTAGGCGTTGGTGATGCTGACTCGTCAGCCACGTATGCTCTGCTGCTCACCATTTTCAAGGAC GCCGTTTCTCGAGTCGCCACAATTGTTTTCGCTCACCGCTTTGGACTAGTCATTGAGCCCGAGGCCAAGCGATAC CGCTTCTTGGCTGATTTGCTCAATGATACAGCCTTCTTCATTGAATTGTACAGCCCATATTTCGTCTCATGGACC AAGGTGCTTGCTCTATGCACGGCTGAAGCTCTCAGAGCAATTTGTGGCGTGGCCGCGGGCGCCAGCAAGGCCGCC TTGAGCTTGCACTTTGCAAAGCAAGATAATTTGTCCGAACTCAATGCCAAAGAGGCGAGCCAAGAAACGGCTGTC GGCCTCGTTGGTTTACTCGTTGGCACCCTGGTTGTCAGGGTGGTTCAGAACCATGACACGGTTGTCTATCTCATG ATAGCCTTGGTGTTTGCCCATCTCTTGATCAACTACTGCGGTGTCAGATGCGTCAACATGGTGACACTCAATAAG CAGCGAGCAACAATAATATTCAACAGCTACAAAACGTCAAAGATTGTTTTGACGCCCATCCAGGTGGCCCAACAA GAGAGTATCCTTTTCTGGGATGATATTATTTGCAACGGCGACAAGCAACCTGTCTGTCGGATTGATTTTGCCCAA AGCTACGCCGACGCTGTGAGCGTCGCCAACATGGGACAGCCTGCCATGGCTGTGGACGGACCTATGCATACCCGA TTCGTCAGTCCCTTTGTCCCGGGAAATATTGCTAAGATCAAGATTATGCTCTGGGAGGGCGCTGAAGCCAAGCAT GCCATTCTCGCATGGTTTGAGGCAATGGATACAGCTTGGTCAATGGAGAAGGATGTACCGTATGGGGATGCCAAA GATGCAGAAAAAGACTCGTTGAAAACAATTATGACAACTAGTCCCAGTGCCGCAGACGATCAGCTCTGGGACAAG CTGCAAAAGATGGGTTGGAACCTAGAGACTGGTGCTCTGGAAACAGGCGCAGGCACGAGGCTTCGCTCCGCCAAG GCTAAGCGCACGCTAGGCGATGTCGAATGA |
| Gene | >OphauB2|2094 ATGAGTCGTCGCCGTCGCCACTTTGATGTTGTTGAACTGTACGCAAGACCATCCGAGTCTGACAAGGATGGCAAG GACACGCTAGCAGCTCTTATCAACTCCAAGCAGGCCATTGACGTGGTCGAGGTGAATAAATCGGGCCAAGACGAG AAGCGATGGCGCCATATTTCAGCCCACGCCGTCTCCCGCGTAAGCGCTTGGTGGTCCCAATGGCGGAGGCTGGTG GCTATGATATCCTTCTCTGACCATGCGGACAGGTACGGGATGAGAAGCGTCAATATTCCGTCTTGGATATATTTG GAGGTTGGCATCAGACTTTGCTCTCGGCTCTCCTCCCCGTGGGCTATCCGGGATCTGTCTCGGACGACTACATAG CATACCAGACCTACGACTCCCTCCAAGCATTCTTCTCCACCATTACCTCCCTTCTAGCCAGCCGAGCCCTACTCA AAGGCCTAGGCGTTGGTGATGCTGACTCGTCAGCCACGTATGCTCTGCTGCTCACCATTTTCAAGGACGCCGTTT CTCGAGTCGCCACAATTGTTTTCGCTCACCGCTTTGGACTAGTCATTGAGCCCGAGGCCAAGCGATACCGCTTCT TGGCTGATTTGCTCAATGATACAGCCTTCTTCATTGAATTGTACAGCCCATATTTCGTCTCATGGACCAAGGTGC TTGCTCTATGCACGGCTGAAGCTCTCAGAGCAATTTGTGGCGTGGCCGCGGGCGCCAGCAAGGCCGCCTTGAGCT TGCACTTTGCAAAGCAAGATAATTTGTCCGAACTCAATGCCAAAGAGGCGAGCCAAGAAACGGCTGTCGGCCTCG TTGGTTTACTCGTTGGCACCCTGGTTGTCAGGGTGGTTCAGAACCATGACACGGTTGTCTATCTCATGATAGCCT TGGTGTTTGCCCATCTCTTGATCAACTACTGCGGTGTCAGATGCGTCAACATGGTGACACTCAATAAGCAGCGAG CAACAATAATATTCAACAGCTACAAAACGTCAAAGATTGTTTTGACGCCCATCCAGGTGGCCCAACAAGAGAGTA TCCTTTTCTGGGATGATATTATTTGCAACGGCGACAAGCAACCTGTCTGTCGGATTGATTTTGCCCAAAGCTACG CCGACGCTGTGAGCGTCGCCAACATGGGACAGCCTGCCATGGCTGTGGACGGACCTATGCATACCCGATTCGTCA GTCCCTTTGTCCCGGGAAATATTGCTAAGATCAAGATTATGCTCTGGGAGGGCGCTGAAGCCAAGCATGCCATTC TCGCATGGTTTGAGGCAATGGATACAGCTTGGTCAATGGAGAAGGATGTACCGTATGGGGATGCCAAAGATGCAG AAAAAGACTCGTTGAAAACAATTATGACAACTAGTCCCAGTGCCGCAGACGATCAGCTCTGGGACAAGCTGCAAA AGATGGGTTGGAACCTAGAGACTGGTGCTCTGGAAACAGGCGCAGGCACGAGGCTTCGCTCCGCCAAGGCTAAGC GCACGCTAGGCGATGTCGAATGA |