© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2093 |
| Gene name | |
| Location | Contig_162:25638..26877 |
| Strand | + |
| Gene length (bp) | 1239 |
| Transcript length (bp) | 1179 |
| Coding sequence length (bp) | 1179 |
| Protein length (aa) | 393 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF18376 | MDD_C | Mevalonate 5-diphosphate decarboxylase C-terminal domain | 1.1E-61 | 199 | 376 |
| PF00288 | GHMP_kinases_N | GHMP kinases N terminal domain | 5.1E-08 | 110 | 168 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32377|MVD1_YEAST | Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2 | 6 | 383 | 3.0E-139 |
| sp|O13963|MVD1_SCHPO | Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1 | 4 | 390 | 2.0E-138 |
| sp|Q6BY07|MVD1_DEBHA | Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MVD1 PE=3 SV=2 | 6 | 387 | 1.0E-134 |
| sp|Q751D8|MVD1_ASHGO | Diphosphomevalonate decarboxylase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MVD1 PE=3 SV=2 | 6 | 383 | 1.0E-133 |
| sp|Q0P570|MVD1_BOVIN | Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1 | 1 | 387 | 3.0E-103 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32377|MVD1_YEAST | Diphosphomevalonate decarboxylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MVD1 PE=1 SV=2 | 6 | 383 | 3.0E-139 |
| sp|O13963|MVD1_SCHPO | Diphosphomevalonate decarboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mvd1 PE=3 SV=1 | 4 | 390 | 2.0E-138 |
| sp|Q6BY07|MVD1_DEBHA | Diphosphomevalonate decarboxylase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=MVD1 PE=3 SV=2 | 6 | 387 | 1.0E-134 |
| sp|Q751D8|MVD1_ASHGO | Diphosphomevalonate decarboxylase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MVD1 PE=3 SV=2 | 6 | 383 | 1.0E-133 |
| sp|Q0P570|MVD1_BOVIN | Diphosphomevalonate decarboxylase OS=Bos taurus GN=MVD PE=2 SV=1 | 1 | 387 | 3.0E-103 |
| sp|Q99JF5|MVD1_MOUSE | Diphosphomevalonate decarboxylase OS=Mus musculus GN=Mvd PE=1 SV=2 | 11 | 387 | 2.0E-102 |
| sp|Q62967|MVD1_RAT | Diphosphomevalonate decarboxylase OS=Rattus norvegicus GN=Mvd PE=1 SV=1 | 11 | 387 | 4.0E-101 |
| sp|P53602|MVD1_HUMAN | Diphosphomevalonate decarboxylase OS=Homo sapiens GN=MVD PE=1 SV=1 | 1 | 387 | 2.0E-100 |
| sp|Q5U403|MVD1_DANRE | Diphosphomevalonate decarboxylase OS=Danio rerio GN=mvd PE=2 SV=1 | 10 | 387 | 4.0E-98 |
| sp|Q54YQ9|MVD1_DICDI | Diphosphomevalonate decarboxylase OS=Dictyostelium discoideum GN=mvd PE=3 SV=1 | 11 | 375 | 6.0E-94 |
| sp|Q97UL5|DMD_SULSO | Diphosphomevalonate decarboxylase OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=SSO2989 PE=1 SV=1 | 10 | 375 | 2.0E-56 |
| sp|D4GXZ3|PMD_HALVD | Phosphomevalonate decarboxylase OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=mvaD PE=1 SV=1 | 20 | 251 | 9.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005524 | ATP binding | Yes |
| GO:0017076 | purine nucleotide binding | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0043167 | ion binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0043168 | anion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| GO:0097367 | carbohydrate derivative binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 30 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2093 MAGERSVYRASTTAPVNIAVVKYWGKRDAKLNLPTNSSLSVTLSQAHLRTLTTAACSASFDGGNSLLLNGEPADV SGARIQACFRELRARRATLEAADPSLPKFSTMTLRIVSHNNFPTAAGLASSAAGFAALVRAIADLYQLPDSPSAL SVIARQGSGSACRSLFGGYVAWRMGQEDDGTDSMADLVAPASHWPEMRALVLVVSASKKDVSSTSGMQQTVATSG LFQQRIAAVVPANMKLMEQAIKDRNFATFAQVTMRESNSFHACAADTYPPIFYMNDVSRVAIRAVESINAQAGKT VAAYTFDAGPNCVVYYLEQDEATVLGAFSQPLGGVAGWTEDNAGKEPSVKLHDGIVGALKDGVSRVIMTGVGDGP SPTEHHLLTQDGKLVTK* |
| Coding | >OphauB2|2093 ATGGCGGGCGAACGCAGCGTCTACCGCGCCAGCACTACAGCGCCCGTCAACATTGCCGTCGTCAAGTACTGGGGC AAACGCGACGCAAAGCTCAACCTGCCCACCAACAGCTCCCTCTCCGTCACTCTCTCTCAGGCCCATCTTCGCACT CTGACCACGGCGGCATGCTCAGCCTCCTTTGATGGCGGCAACAGTCTGCTTCTCAATGGCGAGCCTGCTGATGTG TCGGGCGCCAGAATCCAAGCCTGCTTCCGCGAGCTTCGAGCCCGTCGAGCGACCCTAGAGGCTGCCGATCCAAGC CTGCCCAAGTTTTCTACCATGACGCTGCGCATCGTGTCGCATAACAACTTCCCTACTGCCGCTGGACTGGCATCG TCGGCCGCCGGCTTTGCTGCCCTGGTGCGAGCCATTGCCGACTTGTACCAGCTGCCCGATTCGCCCTCGGCTCTC TCAGTCATTGCTCGTCAAGGATCCGGCTCTGCTTGCAGGAGTCTCTTTGGTGGCTACGTTGCCTGGCGCATGGGA CAAGAGGATGACGGGACAGACTCCATGGCTGACTTGGTAGCTCCCGCCTCGCATTGGCCCGAAATGAGGGCCCTT GTTCTGGTGGTCAGTGCTTCCAAAAAGGACGTCTCATCAACGTCTGGAATGCAGCAGACCGTTGCTACCTCGGGC CTTTTCCAACAGAGGATAGCAGCTGTGGTGCCGGCCAACATGAAACTCATGGAGCAGGCCATCAAGGACCGCAAT TTTGCAACATTTGCACAAGTAACAATGCGCGAATCAAACTCGTTCCATGCCTGTGCCGCCGACACGTATCCACCC ATATTCTACATGAACGACGTCTCTCGCGTTGCCATCCGTGCCGTCGAGTCCATCAATGCTCAAGCTGGCAAGACA GTTGCTGCCTACACCTTTGATGCGGGGCCAAACTGCGTCGTCTACTATCTAGAACAAGACGAGGCAACTGTCTTG GGGGCCTTTTCTCAGCCCTTGGGCGGCGTGGCTGGCTGGACAGAGGATAATGCTGGTAAAGAACCAAGTGTCAAG CTCCATGATGGCATCGTCGGTGCCCTCAAGGATGGAGTGAGCAGAGTTATCATGACGGGTGTAGGCGATGGCCCC TCACCTACAGAGCATCATTTGCTTACACAAGACGGCAAACTGGTGACGAAATGA |
| Transcript | >OphauB2|2093 ATGGCGGGCGAACGCAGCGTCTACCGCGCCAGCACTACAGCGCCCGTCAACATTGCCGTCGTCAAGTACTGGGGC AAACGCGACGCAAAGCTCAACCTGCCCACCAACAGCTCCCTCTCCGTCACTCTCTCTCAGGCCCATCTTCGCACT CTGACCACGGCGGCATGCTCAGCCTCCTTTGATGGCGGCAACAGTCTGCTTCTCAATGGCGAGCCTGCTGATGTG TCGGGCGCCAGAATCCAAGCCTGCTTCCGCGAGCTTCGAGCCCGTCGAGCGACCCTAGAGGCTGCCGATCCAAGC CTGCCCAAGTTTTCTACCATGACGCTGCGCATCGTGTCGCATAACAACTTCCCTACTGCCGCTGGACTGGCATCG TCGGCCGCCGGCTTTGCTGCCCTGGTGCGAGCCATTGCCGACTTGTACCAGCTGCCCGATTCGCCCTCGGCTCTC TCAGTCATTGCTCGTCAAGGATCCGGCTCTGCTTGCAGGAGTCTCTTTGGTGGCTACGTTGCCTGGCGCATGGGA CAAGAGGATGACGGGACAGACTCCATGGCTGACTTGGTAGCTCCCGCCTCGCATTGGCCCGAAATGAGGGCCCTT GTTCTGGTGGTCAGTGCTTCCAAAAAGGACGTCTCATCAACGTCTGGAATGCAGCAGACCGTTGCTACCTCGGGC CTTTTCCAACAGAGGATAGCAGCTGTGGTGCCGGCCAACATGAAACTCATGGAGCAGGCCATCAAGGACCGCAAT TTTGCAACATTTGCACAAGTAACAATGCGCGAATCAAACTCGTTCCATGCCTGTGCCGCCGACACGTATCCACCC ATATTCTACATGAACGACGTCTCTCGCGTTGCCATCCGTGCCGTCGAGTCCATCAATGCTCAAGCTGGCAAGACA GTTGCTGCCTACACCTTTGATGCGGGGCCAAACTGCGTCGTCTACTATCTAGAACAAGACGAGGCAACTGTCTTG GGGGCCTTTTCTCAGCCCTTGGGCGGCGTGGCTGGCTGGACAGAGGATAATGCTGGTAAAGAACCAAGTGTCAAG CTCCATGATGGCATCGTCGGTGCCCTCAAGGATGGAGTGAGCAGAGTTATCATGACGGGTGTAGGCGATGGCCCC TCACCTACAGAGCATCATTTGCTTACACAAGACGGCAAACTGGTGACGAAATGA |
| Gene | >OphauB2|2093 ATGGCGGGCGAACGCAGCGTCTACCGCGCCAGCACTACAGCGCCCGTCAACATTGCCGTCGTCAAGTAAGCAAGC CGTGGCTGCACAAGCGCGGCCTGATGGCAGACTAACACTGGGCATGGCAGGTACTGGGGCAAACGCGACGCAAAG CTCAACCTGCCCACCAACAGCTCCCTCTCCGTCACTCTCTCTCAGGCCCATCTTCGCACTCTGACCACGGCGGCA TGCTCAGCCTCCTTTGATGGCGGCAACAGTCTGCTTCTCAATGGCGAGCCTGCTGATGTGTCGGGCGCCAGAATC CAAGCCTGCTTCCGCGAGCTTCGAGCCCGTCGAGCGACCCTAGAGGCTGCCGATCCAAGCCTGCCCAAGTTTTCT ACCATGACGCTGCGCATCGTGTCGCATAACAACTTCCCTACTGCCGCTGGACTGGCATCGTCGGCCGCCGGCTTT GCTGCCCTGGTGCGAGCCATTGCCGACTTGTACCAGCTGCCCGATTCGCCCTCGGCTCTCTCAGTCATTGCTCGT CAAGGATCCGGCTCTGCTTGCAGGAGTCTCTTTGGTGGCTACGTTGCCTGGCGCATGGGACAAGAGGATGACGGG ACAGACTCCATGGCTGACTTGGTAGCTCCCGCCTCGCATTGGCCCGAAATGAGGGCCCTTGTTCTGGTGGTCAGT GCTTCCAAAAAGGACGTCTCATCAACGTCTGGAATGCAGCAGACCGTTGCTACCTCGGGCCTTTTCCAACAGAGG ATAGCAGCTGTGGTGCCGGCCAACATGAAACTCATGGAGCAGGCCATCAAGGACCGCAATTTTGCAACATTTGCA CAAGTAACAATGCGCGAATCAAACTCGTTCCATGCCTGTGCCGCCGACACGTATCCACCCATATTCTACATGAAC GACGTCTCTCGCGTTGCCATCCGTGCCGTCGAGTCCATCAATGCTCAAGCTGGCAAGACAGTTGCTGCCTACACC TTTGATGCGGGGCCAAACTGCGTCGTCTACTATCTAGAACAAGACGAGGCAACTGTCTTGGGGGCCTTTTCTCAG CCCTTGGGCGGCGTGGCTGGCTGGACAGAGGATAATGCTGGTAAAGAACCAAGTGTCAAGCTCCATGATGGCATC GTCGGTGCCCTCAAGGATGGAGTGAGCAGAGTTATCATGACGGGTGTAGGCGATGGCCCCTCACCTACAGAGCAT CATTTGCTTACACAAGACGGCAAACTGGTGACGAAATGA |