Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|2068
Gene name
Location	Contig_161:7080..9105
Strand	+
Gene length (bp)	2025
Transcript length (bp)	2025
Coding sequence length (bp)	2025
Protein length (aa)	675

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04677	CwfJ_C_1	Protein similar to CwfJ C-terminus 1	4.4E-24	427	552
PF04676	CwfJ_C_2	Protein similar to CwfJ C-terminus 2	1.8E-22	562	668

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q09909\|CWF19_SCHPO	Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf19 PE=1 SV=1	177	672	1.0E-91
sp\|Q8BG79\|C19L2_MOUSE	CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=1 SV=1	241	669	5.0E-44
sp\|Q28C44\|C19L2_XENTR	CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1	357	669	2.0E-40
sp\|Q2TBE0\|C19L2_HUMAN	CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=4	272	669	3.0E-40
sp\|Q3LSS0\|C19L2_DANRE	CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1	279	669	2.0E-38

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q09909\|CWF19_SCHPO	Pre-mRNA-splicing factor cwf19 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf19 PE=1 SV=1	177	672	1.0E-91
sp\|Q8BG79\|C19L2_MOUSE	CWF19-like protein 2 OS=Mus musculus GN=Cwf19l2 PE=1 SV=1	241	669	5.0E-44
sp\|Q28C44\|C19L2_XENTR	CWF19-like protein 2 OS=Xenopus tropicalis GN=cwf19l2 PE=2 SV=1	357	669	2.0E-40
sp\|Q2TBE0\|C19L2_HUMAN	CWF19-like protein 2 OS=Homo sapiens GN=CWF19L2 PE=1 SV=4	272	669	3.0E-40
sp\|Q3LSS0\|C19L2_DANRE	CWF19-like protein 2 OS=Danio rerio GN=cwf19l2 PE=2 SV=1	279	669	2.0E-38
sp\|Q9VXT5\|C19L2_DROME	CWF19-like protein 2 homolog OS=Drosophila melanogaster GN=CG9213 PE=1 SV=2	273	669	1.0E-37
sp\|Q10946\|C19L2_CAEEL	CWF19-like protein 2 homolog OS=Caenorhabditis elegans GN=B0361.2/B0361.1 PE=3 SV=2	423	674	1.0E-23
sp\|Q69NK8\|C3H59_ORYSJ	Zinc finger CCCH domain-containing protein 59 OS=Oryza sativa subsp. japonica GN=Os09g0364000 PE=2 SV=1	453	666	3.0E-08

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 43	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|2068 MDSLDEFERQLAAEKAEREKGPDATKHRRHHHGRQGDDDEGTKHSTRRHHGHQDSHDEDSERHGHRSKRRRHWHE RSHKHHDLKHRRSDQHDKSSEPKQDLPLVPSEQVVESSSGLKRDAWMTAPSALSVEYVESRRKETKPVPRPVQEA QRVIHARELNHGLVQDDDKQDESAADVSYTFGDAGSSWRMSKLGAVYSLAQEKGRPVDQVALERYGSLEAFDAAR EEEAELERRTRHGADYQAKQKPTGELFGQRRRSSRAAEPDASPSLPSQETAAPHILDATALNRLRAQMIKAKLSG AANAAQLEQEYQAASASHAPEAVLLGAMHSRQLAGSSRPEAKPVTTRRGLERGQVEENDELSIKDMVGEERRTKG QVGGEGARLAQRIARDGRFQDNLEYMDDEAAKLARHVERNDAALGSRAVADLHKMTAAIDHCALCHHADTGRAPL APVVSLATRVYLTLAPAPEISPGSAVIVPLAHHANLLACDDDEWEEMRNFMKSLTRMYHAQGRDVVFYEDAAFPP RHAHRRHASLYAVPIPYDEGALAPAHFRQAFLSAGDEWSQHAKVIDTRTPSAPSGGSAGALRRSVAREAPYFHVW FDLDGGLAHIVDDADRWPRHDGFARGVVGGIVDAEAHIVKKRARWSRDADESARVQEWKARWRKFDWTRLLVGD*
Coding	>OphauB2\|2068 ATGGACAGCCTCGACGAGTTTGAAAGACAACTTGCAGCGGAAAAGGCCGAGCGCGAAAAGGGCCCTGATGCTACA AAGCACCGCCGGCATCACCACGGTCGACAGGGTGACGACGATGAAGGCACCAAGCACAGCACTCGCCGCCACCAC GGACACCAAGACAGCCACGACGAGGACAGTGAGCGCCATGGGCATAGAAGCAAGCGCCGGCGTCACTGGCACGAG CGTAGCCACAAACACCATGATTTAAAGCACAGACGCTCCGACCAGCATGACAAGTCGTCGGAGCCAAAGCAAGAC TTGCCGCTTGTGCCTAGCGAGCAAGTCGTCGAGTCGTCTAGCGGCTTGAAGCGAGATGCGTGGATGACTGCTCCG TCGGCTCTCAGTGTCGAATATGTCGAGTCTCGCCGAAAAGAGACCAAGCCCGTGCCGCGGCCGGTGCAAGAGGCG CAGCGCGTCATTCACGCCCGCGAATTAAACCACGGCCTTGTGCAAGACGACGACAAGCAGGACGAGTCTGCCGCA GACGTGTCGTATACATTTGGCGATGCCGGGTCGTCGTGGCGCATGAGCAAACTTGGCGCCGTCTACTCCCTGGCG CAGGAAAAAGGCCGCCCGGTGGACCAAGTGGCCCTGGAGCGCTACGGCAGCCTGGAAGCCTTTGACGCTGCGCGC GAAGAAGAAGCCGAGCTGGAGCGCAGGACAAGGCACGGCGCGGACTACCAGGCCAAGCAAAAGCCAACTGGCGAG CTCTTTGGCCAGCGCCGACGCTCCTCTCGCGCTGCTGAGCCAGACGCTTCCCCCTCGCTGCCAAGCCAGGAGACG GCGGCGCCTCACATCCTCGACGCCACAGCCCTCAACCGCCTCCGCGCACAAATGATCAAGGCCAAACTGAGCGGC GCCGCCAATGCCGCCCAGCTCGAGCAAGAATACCAGGCGGCCAGCGCCTCGCACGCGCCCGAGGCCGTCTTGCTC GGGGCCATGCACAGCCGGCAGCTGGCGGGCTCGTCACGCCCCGAAGCCAAGCCCGTGACGACGCGGCGCGGCCTC GAGCGCGGCCAAGTGGAAGAAAACGACGAGCTCAGCATCAAGGACATGGTGGGCGAGGAGCGCCGCACCAAGGGC CAAGTGGGCGGCGAGGGCGCGCGTCTCGCCCAGCGCATTGCGCGCGACGGCCGCTTCCAAGACAATCTCGAGTAC ATGGACGACGAGGCGGCCAAGCTGGCGCGCCACGTGGAGCGCAACGACGCGGCCCTTGGCAGCAGGGCTGTTGCC GACTTGCACAAAATGACGGCCGCCATTGACCACTGTGCGCTCTGCCACCACGCCGACACGGGCCGCGCGCCGCTT GCGCCCGTCGTCTCCCTCGCCACGCGCGTCTACCTGACGCTGGCGCCCGCTCCAGAAATCAGCCCAGGCAGCGCC GTCATTGTGCCTCTTGCGCACCACGCCAACCTGCTTGCCTGCGACGACGACGAGTGGGAGGAAATGCGCAACTTT ATGAAGAGCCTCACCCGCATGTATCACGCGCAGGGCCGCGACGTGGTCTTTTACGAAGACGCTGCTTTCCCGCCT CGCCACGCCCACCGCCGCCACGCCAGTCTCTACGCCGTACCCATTCCCTATGACGAGGGCGCCCTTGCTCCCGCG CACTTTCGCCAAGCCTTTCTCTCTGCCGGCGACGAATGGTCCCAGCACGCCAAGGTTATCGACACGCGCACGCCC TCTGCTCCCAGTGGTGGTTCCGCAGGCGCGCTGCGACGAAGCGTGGCGCGCGAAGCTCCCTACTTTCACGTCTGG TTCGACCTTGACGGCGGGCTGGCCCACATTGTCGACGATGCGGACCGGTGGCCTCGCCACGATGGGTTTGCGCGC GGCGTGGTGGGCGGCATTGTGGATGCAGAGGCACATATTGTCAAGAAGCGGGCCAGGTGGAGTCGCGATGCCGAC GAGAGTGCGCGGGTGCAAGAGTGGAAGGCGAGGTGGCGCAAGTTTGACTGGACGCGCTTGTTGGTGGGCGATTAA
Transcript	>OphauB2\|2068 ATGGACAGCCTCGACGAGTTTGAAAGACAACTTGCAGCGGAAAAGGCCGAGCGCGAAAAGGGCCCTGATGCTACA AAGCACCGCCGGCATCACCACGGTCGACAGGGTGACGACGATGAAGGCACCAAGCACAGCACTCGCCGCCACCAC GGACACCAAGACAGCCACGACGAGGACAGTGAGCGCCATGGGCATAGAAGCAAGCGCCGGCGTCACTGGCACGAG CGTAGCCACAAACACCATGATTTAAAGCACAGACGCTCCGACCAGCATGACAAGTCGTCGGAGCCAAAGCAAGAC TTGCCGCTTGTGCCTAGCGAGCAAGTCGTCGAGTCGTCTAGCGGCTTGAAGCGAGATGCGTGGATGACTGCTCCG TCGGCTCTCAGTGTCGAATATGTCGAGTCTCGCCGAAAAGAGACCAAGCCCGTGCCGCGGCCGGTGCAAGAGGCG CAGCGCGTCATTCACGCCCGCGAATTAAACCACGGCCTTGTGCAAGACGACGACAAGCAGGACGAGTCTGCCGCA GACGTGTCGTATACATTTGGCGATGCCGGGTCGTCGTGGCGCATGAGCAAACTTGGCGCCGTCTACTCCCTGGCG CAGGAAAAAGGCCGCCCGGTGGACCAAGTGGCCCTGGAGCGCTACGGCAGCCTGGAAGCCTTTGACGCTGCGCGC GAAGAAGAAGCCGAGCTGGAGCGCAGGACAAGGCACGGCGCGGACTACCAGGCCAAGCAAAAGCCAACTGGCGAG CTCTTTGGCCAGCGCCGACGCTCCTCTCGCGCTGCTGAGCCAGACGCTTCCCCCTCGCTGCCAAGCCAGGAGACG GCGGCGCCTCACATCCTCGACGCCACAGCCCTCAACCGCCTCCGCGCACAAATGATCAAGGCCAAACTGAGCGGC GCCGCCAATGCCGCCCAGCTCGAGCAAGAATACCAGGCGGCCAGCGCCTCGCACGCGCCCGAGGCCGTCTTGCTC GGGGCCATGCACAGCCGGCAGCTGGCGGGCTCGTCACGCCCCGAAGCCAAGCCCGTGACGACGCGGCGCGGCCTC GAGCGCGGCCAAGTGGAAGAAAACGACGAGCTCAGCATCAAGGACATGGTGGGCGAGGAGCGCCGCACCAAGGGC CAAGTGGGCGGCGAGGGCGCGCGTCTCGCCCAGCGCATTGCGCGCGACGGCCGCTTCCAAGACAATCTCGAGTAC ATGGACGACGAGGCGGCCAAGCTGGCGCGCCACGTGGAGCGCAACGACGCGGCCCTTGGCAGCAGGGCTGTTGCC GACTTGCACAAAATGACGGCCGCCATTGACCACTGTGCGCTCTGCCACCACGCCGACACGGGCCGCGCGCCGCTT GCGCCCGTCGTCTCCCTCGCCACGCGCGTCTACCTGACGCTGGCGCCCGCTCCAGAAATCAGCCCAGGCAGCGCC GTCATTGTGCCTCTTGCGCACCACGCCAACCTGCTTGCCTGCGACGACGACGAGTGGGAGGAAATGCGCAACTTT ATGAAGAGCCTCACCCGCATGTATCACGCGCAGGGCCGCGACGTGGTCTTTTACGAAGACGCTGCTTTCCCGCCT CGCCACGCCCACCGCCGCCACGCCAGTCTCTACGCCGTACCCATTCCCTATGACGAGGGCGCCCTTGCTCCCGCG CACTTTCGCCAAGCCTTTCTCTCTGCCGGCGACGAATGGTCCCAGCACGCCAAGGTTATCGACACGCGCACGCCC TCTGCTCCCAGTGGTGGTTCCGCAGGCGCGCTGCGACGAAGCGTGGCGCGCGAAGCTCCCTACTTTCACGTCTGG TTCGACCTTGACGGCGGGCTGGCCCACATTGTCGACGATGCGGACCGGTGGCCTCGCCACGATGGGTTTGCGCGC GGCGTGGTGGGCGGCATTGTGGATGCAGAGGCACATATTGTCAAGAAGCGGGCCAGGTGGAGTCGCGATGCCGAC GAGAGTGCGCGGGTGCAAGAGTGGAAGGCGAGGTGGCGCAAGTTTGACTGGACGCGCTTGTTGGTGGGCGATTAA
Gene	>OphauB2\|2068 ATGGACAGCCTCGACGAGTTTGAAAGACAACTTGCAGCGGAAAAGGCCGAGCGCGAAAAGGGCCCTGATGCTACA AAGCACCGCCGGCATCACCACGGTCGACAGGGTGACGACGATGAAGGCACCAAGCACAGCACTCGCCGCCACCAC GGACACCAAGACAGCCACGACGAGGACAGTGAGCGCCATGGGCATAGAAGCAAGCGCCGGCGTCACTGGCACGAG CGTAGCCACAAACACCATGATTTAAAGCACAGACGCTCCGACCAGCATGACAAGTCGTCGGAGCCAAAGCAAGAC TTGCCGCTTGTGCCTAGCGAGCAAGTCGTCGAGTCGTCTAGCGGCTTGAAGCGAGATGCGTGGATGACTGCTCCG TCGGCTCTCAGTGTCGAATATGTCGAGTCTCGCCGAAAAGAGACCAAGCCCGTGCCGCGGCCGGTGCAAGAGGCG CAGCGCGTCATTCACGCCCGCGAATTAAACCACGGCCTTGTGCAAGACGACGACAAGCAGGACGAGTCTGCCGCA GACGTGTCGTATACATTTGGCGATGCCGGGTCGTCGTGGCGCATGAGCAAACTTGGCGCCGTCTACTCCCTGGCG CAGGAAAAAGGCCGCCCGGTGGACCAAGTGGCCCTGGAGCGCTACGGCAGCCTGGAAGCCTTTGACGCTGCGCGC GAAGAAGAAGCCGAGCTGGAGCGCAGGACAAGGCACGGCGCGGACTACCAGGCCAAGCAAAAGCCAACTGGCGAG CTCTTTGGCCAGCGCCGACGCTCCTCTCGCGCTGCTGAGCCAGACGCTTCCCCCTCGCTGCCAAGCCAGGAGACG GCGGCGCCTCACATCCTCGACGCCACAGCCCTCAACCGCCTCCGCGCACAAATGATCAAGGCCAAACTGAGCGGC GCCGCCAATGCCGCCCAGCTCGAGCAAGAATACCAGGCGGCCAGCGCCTCGCACGCGCCCGAGGCCGTCTTGCTC GGGGCCATGCACAGCCGGCAGCTGGCGGGCTCGTCACGCCCCGAAGCCAAGCCCGTGACGACGCGGCGCGGCCTC GAGCGCGGCCAAGTGGAAGAAAACGACGAGCTCAGCATCAAGGACATGGTGGGCGAGGAGCGCCGCACCAAGGGC CAAGTGGGCGGCGAGGGCGCGCGTCTCGCCCAGCGCATTGCGCGCGACGGCCGCTTCCAAGACAATCTCGAGTAC ATGGACGACGAGGCGGCCAAGCTGGCGCGCCACGTGGAGCGCAACGACGCGGCCCTTGGCAGCAGGGCTGTTGCC GACTTGCACAAAATGACGGCCGCCATTGACCACTGTGCGCTCTGCCACCACGCCGACACGGGCCGCGCGCCGCTT GCGCCCGTCGTCTCCCTCGCCACGCGCGTCTACCTGACGCTGGCGCCCGCTCCAGAAATCAGCCCAGGCAGCGCC GTCATTGTGCCTCTTGCGCACCACGCCAACCTGCTTGCCTGCGACGACGACGAGTGGGAGGAAATGCGCAACTTT ATGAAGAGCCTCACCCGCATGTATCACGCGCAGGGCCGCGACGTGGTCTTTTACGAAGACGCTGCTTTCCCGCCT CGCCACGCCCACCGCCGCCACGCCAGTCTCTACGCCGTACCCATTCCCTATGACGAGGGCGCCCTTGCTCCCGCG CACTTTCGCCAAGCCTTTCTCTCTGCCGGCGACGAATGGTCCCAGCACGCCAAGGTTATCGACACGCGCACGCCC TCTGCTCCCAGTGGTGGTTCCGCAGGCGCGCTGCGACGAAGCGTGGCGCGCGAAGCTCCCTACTTTCACGTCTGG TTCGACCTTGACGGCGGGCTGGCCCACATTGTCGACGATGCGGACCGGTGGCCTCGCCACGATGGGTTTGCGCGC GGCGTGGTGGGCGGCATTGTGGATGCAGAGGCACATATTGTCAAGAAGCGGGCCAGGTGGAGTCGCGATGCCGAC GAGAGTGCGCGGGTGCAAGAGTGGAAGGCGAGGTGGCGCAAGTTTGACTGGACGCGCTTGTTGGTGGGCGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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