© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2055 |
| Gene name | |
| Location | Contig_160:18214..19360 |
| Strand | - |
| Gene length (bp) | 1146 |
| Transcript length (bp) | 1014 |
| Coding sequence length (bp) | 1014 |
| Protein length (aa) | 338 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10058 | zinc_ribbon_10 | Predicted integral membrane zinc-ribbon metal-binding protein | 2.9E-16 | 229 | 285 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q28HF6|LNP_XENTR | Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1 | 20 | 325 | 1.0E-11 |
| sp|Q9C0E8|LNP_HUMAN | Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2 | 20 | 289 | 7.0E-11 |
| sp|Q5R891|LNP_PONAB | Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1 | 20 | 289 | 1.0E-10 |
| sp|Q7TQ95|LNP_MOUSE | Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1 | 20 | 324 | 2.0E-10 |
| sp|Q17667|LNP1_CAEEL | Protein lunapark-1 OS=Caenorhabditis elegans GN=lnp-1 PE=2 SV=2 | 37 | 289 | 2.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q28HF6|LNP_XENTR | Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1 | 20 | 325 | 1.0E-11 |
| sp|Q9C0E8|LNP_HUMAN | Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2 | 20 | 289 | 7.0E-11 |
| sp|Q5R891|LNP_PONAB | Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1 | 20 | 289 | 1.0E-10 |
| sp|Q7TQ95|LNP_MOUSE | Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1 | 20 | 324 | 2.0E-10 |
| sp|Q17667|LNP1_CAEEL | Protein lunapark-1 OS=Caenorhabditis elegans GN=lnp-1 PE=2 SV=2 | 37 | 289 | 2.0E-08 |
| sp|Q6DFJ8|LNP_XENLA | Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1 | 20 | 315 | 2.0E-08 |
| sp|Q6PFM4|LNPB_DANRE | Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2 | 40 | 326 | 8.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 79 | 101 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2055 MVSFWPWKGDASSTASFEKTLSVLSAKISTVQSRLEKMRFRSRRARLVTTLYLSFGYLVYAIVSILVIGRAGLGT REWTGLAAGPVVIYAVRYLVVAYYNFRTDGLSSRLKALQQERSRTIDKLKDATRYNSTLELLEKYGGDDQDEAKA ALQSPETASSSDKASNKAPGPPPTEKTPPTRVLLPPPPTANIQAQPRRDASPHAVAEVLPGAEFAPNAFSSCASE QRNWYDRIFDVLLGEDADPADARNRLALICHSCRRVNGLAPPGSRSLADVGLWRCMHCAAPNEADAEPDEGKRIV KEILEEQRAASPAGGQGSAVPSTEQDGVRRRRPNDEA* |
| Coding | >OphauB2|2055 ATGGTGTCCTTTTGGCCATGGAAGGGCGACGCCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTCCTCTCG GCCAAGATTAGCACTGTGCAGTCGCGACTAGAAAAAATGCGCTTTCGCTCCCGCCGCGCTCGCCTCGTGACGACG CTATACCTGTCGTTTGGCTACCTCGTCTACGCCATTGTCAGCATCCTCGTCATTGGCCGCGCTGGCCTGGGCACC CGGGAATGGACGGGCCTGGCTGCCGGACCTGTTGTCATCTACGCAGTGCGATATCTCGTCGTGGCCTACTATAAC TTTCGCACCGATGGTCTCTCGTCTCGCCTCAAGGCGCTCCAGCAAGAACGCTCTCGCACCATTGACAAGCTAAAA GACGCCACGCGCTACAACTCTACCCTTGAGCTTCTCGAAAAGTATGGCGGCGACGACCAGGATGAAGCCAAGGCG GCCCTCCAGTCGCCCGAAACAGCTTCGTCCTCGGACAAGGCGTCCAACAAGGCGCCTGGTCCGCCCCCGACGGAA AAGACTCCCCCGACCCGAGTCCTGCTCCCTCCTCCTCCCACAGCCAACATCCAGGCCCAGCCTCGCCGAGACGCA TCGCCTCATGCCGTTGCCGAGGTGCTGCCCGGCGCTGAATTCGCCCCCAACGCCTTTTCGTCTTGCGCGTCGGAG CAGAGGAACTGGTACGACCGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCTGCCGACGCGCGCAACCGC TTGGCTCTCATTTGCCACTCGTGCCGCCGCGTCAATGGCTTGGCTCCTCCGGGCTCCCGCTCTCTCGCCGATGTG GGCCTTTGGCGCTGCATGCACTGCGCTGCCCCCAACGAGGCCGACGCCGAGCCTGATGAGGGCAAGCGCATCGTC AAGGAGATTCTTGAAGAGCAGCGTGCCGCTTCTCCTGCTGGGGGACAAGGCTCAGCGGTGCCATCAACCGAACAA GACGGCGTTCGGCGACGGCGGCCCAATGATGAAGCCTAG |
| Transcript | >OphauB2|2055 ATGGTGTCCTTTTGGCCATGGAAGGGCGACGCCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTCCTCTCG GCCAAGATTAGCACTGTGCAGTCGCGACTAGAAAAAATGCGCTTTCGCTCCCGCCGCGCTCGCCTCGTGACGACG CTATACCTGTCGTTTGGCTACCTCGTCTACGCCATTGTCAGCATCCTCGTCATTGGCCGCGCTGGCCTGGGCACC CGGGAATGGACGGGCCTGGCTGCCGGACCTGTTGTCATCTACGCAGTGCGATATCTCGTCGTGGCCTACTATAAC TTTCGCACCGATGGTCTCTCGTCTCGCCTCAAGGCGCTCCAGCAAGAACGCTCTCGCACCATTGACAAGCTAAAA GACGCCACGCGCTACAACTCTACCCTTGAGCTTCTCGAAAAGTATGGCGGCGACGACCAGGATGAAGCCAAGGCG GCCCTCCAGTCGCCCGAAACAGCTTCGTCCTCGGACAAGGCGTCCAACAAGGCGCCTGGTCCGCCCCCGACGGAA AAGACTCCCCCGACCCGAGTCCTGCTCCCTCCTCCTCCCACAGCCAACATCCAGGCCCAGCCTCGCCGAGACGCA TCGCCTCATGCCGTTGCCGAGGTGCTGCCCGGCGCTGAATTCGCCCCCAACGCCTTTTCGTCTTGCGCGTCGGAG CAGAGGAACTGGTACGACCGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCTGCCGACGCGCGCAACCGC TTGGCTCTCATTTGCCACTCGTGCCGCCGCGTCAATGGCTTGGCTCCTCCGGGCTCCCGCTCTCTCGCCGATGTG GGCCTTTGGCGCTGCATGCACTGCGCTGCCCCCAACGAGGCCGACGCCGAGCCTGATGAGGGCAAGCGCATCGTC AAGGAGATTCTTGAAGAGCAGCGTGCCGCTTCTCCTGCTGGGGGACAAGGCTCAGCGGTGCCATCAACCGAACAA GACGGCGTTCGGCGACGGCGGCCCAATGATGAAGCCTAG |
| Gene | >OphauB2|2055 ATGGTGTCCTTTTGGCCATGGAAGGTCAGCCCCTCAAGCCCTCACCCACCACGAGCCGAGAGCCAGCACAGCAAC TAAAAGTTGGATCCAGGGCGACGCCTCGTCTACGGCTTCGTTTGAAAAGACCTTGTCGGTCCTCTCGGCCAAGAT TAGCACTGTGCAGTCGCGACTAGAAAAAATGCGCTTTCGCTCCCGCCGCGCTCGCCTCGTGACGACGCTATACCT GTCGTTTGGCTACCTCGTCTACGCCATTGTCAGCATCCTCGTCATTGGCCGCGCTGGCCTGGGCACCCGGGAATG GACGGGCCTGGCTGCCGGACCTGTTGTGTGCGCATTCTTCTTGTTGGCCTGCCCGCCCTACCTAGACTAATGAGC AGACGTGGCAAGAATAGCATCTACGCAGTGCGATATCTCGTCGTGGCCTACTATAACTTTCGCACCGATGGTCTC TCGTCTCGCCTCAAGGCGCTCCAGCAAGAACGCTCTCGCACCATTGACAAGCTAAAAGACGCCACGCGCTACAAC TCTACCCTTGAGCTTCTCGAAAAGTATGGCGGCGACGACCAGGATGAAGCCAAGGCGGCCCTCCAGTCGCCCGAA ACAGCTTCGTCCTCGGACAAGGCGTCCAACAAGGCGCCTGGTCCGCCCCCGACGGAAAAGACTCCCCCGACCCGA GTCCTGCTCCCTCCTCCTCCCACAGCCAACATCCAGGCCCAGCCTCGCCGAGACGCATCGCCTCATGCCGTTGCC GAGGTGCTGCCCGGCGCTGAATTCGCCCCCAACGCCTTTTCGTCTTGCGCGTCGGAGCAGAGGAACTGGTACGAC CGCATCTTTGACGTGCTTCTCGGCGAAGATGCAGACCCTGCCGACGCGCGCAACCGCTTGGCTCTCATTTGCCAC TCGTGCCGCCGCGTCAATGGCTTGGCTCCTCCGGGCTCCCGCTCTCTCGCCGATGTGGGCCTTTGGCGCTGCATG CACTGCGCTGCCCCCAACGAGGCCGACGCCGAGCCTGATGAGGGCAAGCGCATCGTCAAGGAGATTCTTGAAGAG CAGCGTGCCGCTTCTCCTGCTGGGGGACAAGGCTCAGCGGTGCCATCAACCGAACAAGACGGCGTTCGGCGACGG CGGCCCAATGATGAAGCCTAG |