© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|2040 |
| Gene name | |
| Location | Contig_16:220650..222351 |
| Strand | - |
| Gene length (bp) | 1701 |
| Transcript length (bp) | 1701 |
| Coding sequence length (bp) | 1701 |
| Protein length (aa) | 567 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00890 | FAD_binding_2 | FAD binding domain | 1.7E-94 | 8 | 543 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 6.6E-08 | 10 | 46 |
| PF01494 | FAD_binding_3 | FAD binding domain | 3.6E-07 | 7 | 45 |
| PF01266 | DAO | FAD dependent oxidoreductase | 1.4E-06 | 8 | 58 |
| PF01134 | GIDA | Glucose inhibited division protein A | 1.1E-05 | 8 | 43 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7D9A2|Y0809_MYCTO | KsdD-like steroid dehydrogenase MT0809 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0809 PE=3 SV=1 | 9 | 562 | 0.0E+00 |
| sp|P71838|Y0785_MYCTU | KsdD-like steroid dehydrogenase Rv0785 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0785 PE=1 SV=2 | 9 | 562 | 0.0E+00 |
| sp|A0R4H4|Y5835_MYCS2 | KsdD-like steroid dehydrogenase MSMEG_5835 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_5835 PE=1 SV=1 | 8 | 549 | 0.0E+00 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0071949 | FAD binding | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005488 | binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0043168 | anion binding | No |
| GO:0050660 | flavin adenine dinucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0000166 | nucleotide binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|2040 MSADKEPVVIVGAGLAGLVAAYELSERGIKTVLLDQENSNNLGGQAFWSLGGLFLVNSADQRRNGIHDSRELAMQ DWMGTAAFDRQDEDTWPRRWAEAFVNFAADEFENYMKNLGLTFLNVGWAERGNGKADGHGNSVPRFHLSWGVGPE VVRVFSEPLNKAAKRGLVDFKFRHAVDKILIDDKSGRAIGVSGRILAHDDSPRGVKSNREEKEKFELRGAAVLVA SGGIGGDMDAVRAKWPTDRLGKVPQHMIAGVPAHVDGRMIGITEEAGGRIINADRMWHYTEGIQNWQPIWPKHGI RILPGPSSLWLDATGKRLPPFLFPGCDTLATLKYICSTGYDYTWFILDQSIIAREFALSGSEQNPDIADKSMWRV IMQRILSSKGTQPVQNFQKYGADFVVRDNLQDLVAGMNKLAAERNGPALEYEKVKAVIDLRDSQMANSYSKDAQA MLLHNARSYWPERLSRLAKPHQLLNKTMSNGPLIAVRLNILTRKSLGGIETNLSSNVMRPSGEAFPGLYAAGEAA GFGGGGVHGYSALEGTFLGGCIFSGRAAGRAIAQELQGSNA* |
| Coding | >OphauB2|2040 ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG |
| Transcript | >OphauB2|2040 ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG |
| Gene | >OphauB2|2040 ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG |