Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2040
Gene name
LocationContig_16:220650..222351
Strand-
Gene length (bp)1701
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00890 FAD_binding_2 FAD binding domain 1.7E-94 8 543
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 6.6E-08 10 46
PF01494 FAD_binding_3 FAD binding domain 3.6E-07 7 45
PF01266 DAO FAD dependent oxidoreductase 1.4E-06 8 58
PF01134 GIDA Glucose inhibited division protein A 1.1E-05 8 43

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q7D9A2|Y0809_MYCTO KsdD-like steroid dehydrogenase MT0809 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0809 PE=3 SV=1 9 562 0.0E+00
sp|P71838|Y0785_MYCTU KsdD-like steroid dehydrogenase Rv0785 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0785 PE=1 SV=2 9 562 0.0E+00
sp|A0R4H4|Y5835_MYCS2 KsdD-like steroid dehydrogenase MSMEG_5835 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_5835 PE=1 SV=1 8 549 0.0E+00

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0071949 FAD binding Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0005488 binding No
GO:0036094 small molecule binding No
GO:0043168 anion binding No
GO:0050660 flavin adenine dinucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:1901265 nucleoside phosphate binding No
GO:0097159 organic cyclic compound binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2040
MSADKEPVVIVGAGLAGLVAAYELSERGIKTVLLDQENSNNLGGQAFWSLGGLFLVNSADQRRNGIHDSRELAMQ
DWMGTAAFDRQDEDTWPRRWAEAFVNFAADEFENYMKNLGLTFLNVGWAERGNGKADGHGNSVPRFHLSWGVGPE
VVRVFSEPLNKAAKRGLVDFKFRHAVDKILIDDKSGRAIGVSGRILAHDDSPRGVKSNREEKEKFELRGAAVLVA
SGGIGGDMDAVRAKWPTDRLGKVPQHMIAGVPAHVDGRMIGITEEAGGRIINADRMWHYTEGIQNWQPIWPKHGI
RILPGPSSLWLDATGKRLPPFLFPGCDTLATLKYICSTGYDYTWFILDQSIIAREFALSGSEQNPDIADKSMWRV
IMQRILSSKGTQPVQNFQKYGADFVVRDNLQDLVAGMNKLAAERNGPALEYEKVKAVIDLRDSQMANSYSKDAQA
MLLHNARSYWPERLSRLAKPHQLLNKTMSNGPLIAVRLNILTRKSLGGIETNLSSNVMRPSGEAFPGLYAAGEAA
GFGGGGVHGYSALEGTFLGGCIFSGRAAGRAIAQELQGSNA*
Coding >OphauB2|2040
ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC
GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT
GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA
GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC
AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG
CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG
GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA
GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC
TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC
TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA
CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC
ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC
CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG
TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT
ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC
ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT
GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA
TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA
ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC
AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG
ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT
GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC
CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG
Transcript >OphauB2|2040
ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC
GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT
GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA
GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC
AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG
CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG
GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA
GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC
TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC
TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA
CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC
ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC
CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG
TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT
ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC
ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT
GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA
TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA
ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC
AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG
ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT
GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC
CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG
Gene >OphauB2|2040
ATGTCGGCAGACAAAGAACCAGTCGTCATTGTCGGCGCCGGGTTGGCCGGCCTTGTGGCAGCATATGAACTTAGC
GAGCGCGGCATCAAGACGGTGCTGCTGGACCAAGAAAACTCCAACAACTTGGGCGGACAGGCCTTTTGGTCGCTT
GGCGGCCTCTTCCTCGTCAACTCTGCTGACCAGAGACGAAATGGAATCCACGATTCGCGCGAGCTGGCAATGCAA
GATTGGATGGGCACGGCAGCATTTGACCGACAAGATGAAGATACTTGGCCGCGGCGCTGGGCAGAGGCCTTTGTC
AATTTTGCCGCCGACGAGTTTGAGAACTACATGAAGAATCTCGGCTTGACCTTTCTCAACGTCGGCTGGGCTGAG
CGTGGCAACGGCAAAGCCGATGGCCATGGGAATTCGGTGCCACGTTTTCATCTTAGTTGGGGCGTAGGGCCAGAG
GTTGTGCGCGTCTTTTCCGAGCCACTCAACAAAGCTGCAAAAAGGGGCCTTGTTGACTTCAAGTTTCGCCACGCA
GTTGACAAGATTCTAATCGACGACAAGTCGGGTCGCGCAATTGGCGTTTCAGGCCGTATTCTCGCCCATGACGAC
TCGCCTCGCGGCGTCAAGTCGAATCGAGAGGAAAAGGAAAAGTTTGAGTTGCGCGGCGCGGCTGTGCTGGTTGCC
TCTGGAGGCATTGGTGGCGACATGGACGCTGTGCGCGCCAAATGGCCTACAGACCGACTCGGCAAAGTCCCTCAA
CACATGATTGCTGGTGTTCCGGCTCATGTCGATGGGCGCATGATTGGCATCACTGAGGAAGCTGGTGGCCGAATC
ATCAATGCCGACCGCATGTGGCACTATACAGAAGGCATCCAAAACTGGCAGCCCATCTGGCCCAAACACGGCATC
CGCATCTTGCCTGGCCCTTCATCGCTCTGGCTCGACGCCACGGGCAAGCGCCTCCCTCCTTTTCTCTTCCCTGGG
TGCGACACGCTTGCCACACTCAAGTACATTTGCTCGACAGGATACGACTATACATGGTTCATTCTCGACCAATCT
ATTATTGCGCGCGAGTTTGCCTTGTCTGGGTCAGAACAGAATCCTGACATTGCCGACAAGAGTATGTGGAGGGTC
ATTATGCAGCGAATCCTGAGCAGCAAAGGCACCCAGCCTGTACAAAACTTCCAAAAGTATGGCGCCGACTTTGTT
GTTCGAGACAACCTACAAGACTTGGTGGCCGGCATGAATAAACTAGCGGCAGAGCGCAATGGACCAGCTCTCGAA
TACGAAAAGGTAAAAGCAGTCATTGACCTTCGCGACAGCCAAATGGCCAACTCGTACTCCAAAGACGCTCAGGCA
ATGCTGCTGCATAATGCGCGCTCCTACTGGCCAGAGAGACTCAGCCGATTAGCCAAGCCTCATCAACTGCTCAAC
AAGACCATGTCCAACGGTCCTCTAATCGCCGTGCGCCTCAATATTCTCACGCGAAAGTCGCTTGGAGGCATTGAG
ACAAACTTGAGTAGCAATGTCATGCGGCCCAGTGGAGAGGCATTTCCAGGTTTATATGCAGCTGGGGAGGCGGCT
GGATTCGGTGGCGGAGGAGTCCATGGATACAGCGCACTCGAGGGCACATTTTTGGGAGGCTGCATTTTCTCGGGC
CGCGCTGCAGGGAGAGCCATTGCACAAGAGCTACAAGGTAGCAATGCCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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