Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|2030
Gene name
LocationContig_16:193219..194131
Strand+
Gene length (bp)912
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 3.2E-07 8 145
PF05368 NmrA NmrA-like family 5.4E-07 5 225

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1 5 147 2.0E-10
sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1 5 240 9.0E-10
sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=2 SV=1 3 147 5.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|2030
MRVAIAGAGDLARYLCEEFIKAGHEIVILSRKHRSHLERLGVTQIITDYTLESLRIPLADCEVLISTIGDLTSSN
VHVHCSLLQACQQSPKCKRFIPSEFGGDIESFPDQPSFVYPARKDIRKALQEQTDVEWTLIANGWLADYTVPPQN
RYIRDIDELCPINITGGSIVIPGSGREPVDLVWARDVAKALAELVTKPAWEPFTFISGERTCWNDVANIVQQRYG
QKMTISHQSLSKIVECARAAKDQDTLLLAEFQLYSLSHASSLPQEKVQAQRDKYFPGIHFRNLQEGLAELDSDSN
LIV*
Coding >OphauB2|2030
ATGCGCGTGGCAATTGCTGGTGCCGGTGACTTGGCCCGCTACCTATGCGAGGAGTTCATCAAGGCCGGTCACGAG
ATTGTCATTCTGTCGCGCAAACACAGGTCGCATCTTGAGCGTCTAGGTGTCACTCAAATCATCACAGACTATACT
CTCGAGTCCCTTCGCATCCCGTTGGCCGACTGCGAGGTGCTGATATCGACGATTGGTGACCTTACATCGTCAAAC
GTCCATGTCCACTGCTCCCTACTCCAAGCCTGTCAGCAGAGCCCAAAGTGCAAGCGGTTCATCCCATCCGAGTTT
GGGGGGGACATTGAATCCTTTCCCGATCAGCCATCTTTCGTCTATCCCGCACGTAAAGATATACGCAAGGCCCTA
CAAGAACAGACAGATGTCGAGTGGACTCTGATCGCCAACGGCTGGCTAGCCGACTACACTGTGCCCCCTCAGAAT
CGGTACATCAGGGACATTGACGAACTCTGCCCCATTAATATCACGGGCGGCAGCATCGTCATTCCAGGATCTGGG
AGGGAGCCTGTGGACTTGGTGTGGGCACGAGACGTTGCCAAAGCGCTGGCAGAGCTCGTCACCAAACCTGCATGG
GAGCCCTTTACCTTCATTTCCGGAGAGCGCACCTGCTGGAATGATGTCGCCAACATTGTCCAACAGAGATATGGC
CAGAAGATGACCATATCCCACCAATCGCTCAGCAAGATTGTGGAGTGTGCTAGAGCGGCAAAGGACCAAGATACG
CTGCTTCTTGCAGAGTTTCAGCTATACTCGTTGAGCCACGCAAGCTCCTTGCCTCAGGAAAAGGTGCAAGCTCAG
AGAGACAAGTATTTTCCGGGAATTCACTTCCGAAACCTACAAGAGGGCTTGGCTGAGTTGGACAGTGACTCGAAC
CTGATTGTGTAG
Transcript >OphauB2|2030
ATGCGCGTGGCAATTGCTGGTGCCGGTGACTTGGCCCGCTACCTATGCGAGGAGTTCATCAAGGCCGGTCACGAG
ATTGTCATTCTGTCGCGCAAACACAGGTCGCATCTTGAGCGTCTAGGTGTCACTCAAATCATCACAGACTATACT
CTCGAGTCCCTTCGCATCCCGTTGGCCGACTGCGAGGTGCTGATATCGACGATTGGTGACCTTACATCGTCAAAC
GTCCATGTCCACTGCTCCCTACTCCAAGCCTGTCAGCAGAGCCCAAAGTGCAAGCGGTTCATCCCATCCGAGTTT
GGGGGGGACATTGAATCCTTTCCCGATCAGCCATCTTTCGTCTATCCCGCACGTAAAGATATACGCAAGGCCCTA
CAAGAACAGACAGATGTCGAGTGGACTCTGATCGCCAACGGCTGGCTAGCCGACTACACTGTGCCCCCTCAGAAT
CGGTACATCAGGGACATTGACGAACTCTGCCCCATTAATATCACGGGCGGCAGCATCGTCATTCCAGGATCTGGG
AGGGAGCCTGTGGACTTGGTGTGGGCACGAGACGTTGCCAAAGCGCTGGCAGAGCTCGTCACCAAACCTGCATGG
GAGCCCTTTACCTTCATTTCCGGAGAGCGCACCTGCTGGAATGATGTCGCCAACATTGTCCAACAGAGATATGGC
CAGAAGATGACCATATCCCACCAATCGCTCAGCAAGATTGTGGAGTGTGCTAGAGCGGCAAAGGACCAAGATACG
CTGCTTCTTGCAGAGTTTCAGCTATACTCGTTGAGCCACGCAAGCTCCTTGCCTCAGGAAAAGGTGCAAGCTCAG
AGAGACAAGTATTTTCCGGGAATTCACTTCCGAAACCTACAAGAGGGCTTGGCTGAGTTGGACAGTGACTCGAAC
CTGATTGTGTAG
Gene >OphauB2|2030
ATGCGCGTGGCAATTGCTGGTGCCGGTGACTTGGCCCGCTACCTATGCGAGGAGTTCATCAAGGCCGGTCACGAG
ATTGTCATTCTGTCGCGCAAACACAGGTCGCATCTTGAGCGTCTAGGTGTCACTCAAATCATCACAGACTATACT
CTCGAGTCCCTTCGCATCCCGTTGGCCGACTGCGAGGTGCTGATATCGACGATTGGTGACCTTACATCGTCAAAC
GTCCATGTCCACTGCTCCCTACTCCAAGCCTGTCAGCAGAGCCCAAAGTGCAAGCGGTTCATCCCATCCGAGTTT
GGGGGGGACATTGAATCCTTTCCCGATCAGCCATCTTTCGTCTATCCCGCACGTAAAGATATACGCAAGGCCCTA
CAAGAACAGACAGATGTCGAGTGGACTCTGATCGCCAACGGCTGGCTAGCCGACTACACTGTGCCCCCTCAGAAT
CGGTACATCAGGGACATTGACGAACTCTGCCCCATTAATATCACGGGCGGCAGCATCGTCATTCCAGGATCTGGG
AGGGAGCCTGTGGACTTGGTGTGGGCACGAGACGTTGCCAAAGCGCTGGCAGAGCTCGTCACCAAACCTGCATGG
GAGCCCTTTACCTTCATTTCCGGAGAGCGCACCTGCTGGAATGATGTCGCCAACATTGTCCAACAGAGATATGGC
CAGAAGATGACCATATCCCACCAATCGCTCAGCAAGATTGTGGAGTGTGCTAGAGCGGCAAAGGACCAAGATACG
CTGCTTCTTGCAGAGTTTCAGCTATACTCGTTGAGCCACGCAAGCTCCTTGCCTCAGGAAAAGGTGCAAGCTCAG
AGAGACAAGTATTTTCCGGGAATTCACTTCCGAAACCTACAAGAGGGCTTGGCTGAGTTGGACAGTGACTCGAAC
CTGATTGTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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