Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1999
Gene name
LocationContig_16:57473..59223
Strand+
Gene length (bp)1750
Transcript length (bp)1173
Coding sequence length (bp)1173
Protein length (aa) 391

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03009 GDPD Glycerophosphoryl diester phosphodiesterase family 1.0E-30 53 317

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14169|PGC1_SCHPO Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4D7.02c PE=3 SV=2 48 298 3.0E-26
sp|Q08959|PGC1_YEAST Phosphatidylglycerol phospholipase C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGC1 PE=1 SV=1 49 304 3.0E-19
sp|P54527|YQIK_BACSU Uncharacterized protein YqiK OS=Bacillus subtilis (strain 168) GN=yqiK PE=4 SV=2 47 139 1.0E-08
sp|Q8N9F7|GDPD1_HUMAN Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Homo sapiens GN=GDPD1 PE=1 SV=2 46 117 7.0E-08
sp|Q9CRY7|GDPD1_MOUSE Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Mus musculus GN=Gdpd1 PE=1 SV=1 46 117 7.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14169|PGC1_SCHPO Phosphatidylglycerol phospholipase C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4D7.02c PE=3 SV=2 48 298 3.0E-26
sp|Q08959|PGC1_YEAST Phosphatidylglycerol phospholipase C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PGC1 PE=1 SV=1 49 304 3.0E-19
sp|P54527|YQIK_BACSU Uncharacterized protein YqiK OS=Bacillus subtilis (strain 168) GN=yqiK PE=4 SV=2 47 139 1.0E-08
sp|Q8N9F7|GDPD1_HUMAN Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Homo sapiens GN=GDPD1 PE=1 SV=2 46 117 7.0E-08
sp|Q9CRY7|GDPD1_MOUSE Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Mus musculus GN=Gdpd1 PE=1 SV=1 46 117 7.0E-08
sp|Q0VGK4|GDPD1_RAT Glycerophosphodiester phosphodiesterase domain-containing protein 1 OS=Rattus norvegicus GN=Gdpd1 PE=2 SV=1 46 117 7.0E-08
sp|Q9NZC3|GDE1_HUMAN Glycerophosphodiester phosphodiesterase 1 OS=Homo sapiens GN=GDE1 PE=1 SV=1 38 138 9.0E-08
sp|Q3T0T0|GDE1_BOVIN Glycerophosphodiester phosphodiesterase 1 OS=Bos taurus GN=GDE1 PE=2 SV=1 38 138 1.0E-07
sp|P9WMU3|GLPQ1_MYCTU Probable glycerophosphoryl diester phosphodiesterase 1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=glpQ1 PE=1 SV=1 48 120 3.0E-07
sp|P9WMU2|GLPQ1_MYCTO Probable glycerophosphoryl diester phosphodiesterase 1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=glpQ1 PE=3 SV=1 48 120 3.0E-07
sp|Q9JL56|GDE1_MOUSE Glycerophosphodiester phosphodiesterase 1 OS=Mus musculus GN=Gde1 PE=1 SV=1 38 127 6.0E-07
sp|Q9JL55|GDE1_RAT Glycerophosphodiester phosphodiesterase 1 OS=Rattus norvegicus GN=Gde1 PE=1 SV=2 38 135 7.0E-07
sp|P10908|UGPQ_ECOLI Glycerophosphoryl diester phosphodiesterase OS=Escherichia coli (strain K12) GN=ugpQ PE=1 SV=1 48 120 9.0E-07
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GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0008081 phosphoric diester hydrolase activity Yes
GO:0003824 catalytic activity No
GO:0044238 primary metabolic process No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0003674 molecular_function No
GO:0042578 phosphoric ester hydrolase activity No
GO:0016787 hydrolase activity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

Domain # Start End Length
1 351 373 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1999
METVPQGVVLFEEVQKKQGEAKTPTDAPAAASFTAARPSSKCPKLLIPQAVAHRGFKAQQAENTMAAFCAAARAG
AHAIETDVRLSRDGIAVLSHDASLRRCFGVQGEVAARDWAQLARLRTVRDARQGMPRLRDLLAWLAGRPSDGGAE
AGEGDEVDDEVRERLWVLLDIKMDDDAQTLVDAIATAIAQVPPSSVPWEQRIVLGCWNASTVRAARTSLPTYPLS
HIGVSLSYASHFVAPPASLPAFNLAYPPLLLRGTSLLNKLRAARRAVFLWTLNDQTSMTWALALNTLSSLPDDAD
ASQKGARVDAVISDDPALFLDVCAKFESRLASNPSASLHHPPLTTRASIRRTLGLVLIQLLMTLIFLYRRFWLYR
LDYMNEATPSRHLKK*
Coding >OphauB2|1999
ATGGAGACGGTGCCCCAAGGTGTCGTCTTGTTTGAGGAGGTGCAAAAGAAGCAAGGAGAAGCCAAAACACCAACA
GATGCACCAGCAGCAGCATCCTTCACCGCCGCCCGCCCCTCGTCCAAATGTCCCAAGCTCCTCATCCCCCAGGCC
GTTGCCCACCGCGGCTTCAAGGCCCAGCAGGCGGAAAACACCATGGCGGCCTTTTGTGCCGCTGCGCGCGCCGGC
GCCCACGCCATTGAAACCGACGTGCGGCTCTCGCGCGACGGCATTGCTGTCCTCTCGCATGATGCGTCGCTGCGG
CGCTGCTTTGGCGTCCAAGGCGAGGTGGCGGCGCGGGACTGGGCCCAGCTGGCGCGCCTGCGCACTGTGAGGGAT
GCGAGACAGGGCATGCCGCGTCTGCGAGACTTGTTGGCGTGGTTGGCGGGGAGGCCGTCTGATGGGGGGGCTGAG
GCGGGTGAGGGGGACGAGGTTGACGACGAGGTGAGGGAGAGGCTATGGGTCTTGTTGGATATAAAGATGGACGAC
GATGCGCAGACCCTCGTCGACGCCATTGCCACGGCCATTGCCCAGGTGCCTCCCTCGTCGGTGCCGTGGGAGCAG
CGCATCGTCCTCGGCTGCTGGAACGCTTCCACCGTCCGTGCCGCCCGCACTTCTCTCCCCACCTATCCCCTCTCC
CACATTGGCGTCTCCCTCTCGTACGCTTCCCACTTTGTCGCTCCGCCCGCGTCTCTCCCAGCCTTCAACCTCGCC
TACCCGCCTCTGCTCCTCCGTGGCACTTCTCTCCTCAATAAACTCCGCGCCGCTCGCCGCGCCGTCTTCCTCTGG
ACCCTAAACGATCAGACTTCCATGACCTGGGCCCTCGCCCTAAACACCTTGTCGTCCCTGCCCGACGACGCCGAC
GCCTCGCAGAAAGGCGCCCGCGTCGACGCCGTCATCTCGGATGATCCCGCCCTCTTCCTCGACGTGTGTGCAAAG
TTTGAGTCGCGCCTTGCGTCCAATCCCTCTGCTTCCCTTCATCATCCTCCACTCACTACGCGTGCTTCTATTCGT
CGTACTCTTGGCCTTGTTCTCATTCAGCTTCTCATGACTCTCATCTTCCTGTACCGCCGCTTTTGGTTGTACAGG
CTGGACTACATGAACGAAGCTACGCCATCCCGTCACTTGAAAAAGTAG
Transcript >OphauB2|1999
ATGGAGACGGTGCCCCAAGGTGTCGTCTTGTTTGAGGAGGTGCAAAAGAAGCAAGGAGAAGCCAAAACACCAACA
GATGCACCAGCAGCAGCATCCTTCACCGCCGCCCGCCCCTCGTCCAAATGTCCCAAGCTCCTCATCCCCCAGGCC
GTTGCCCACCGCGGCTTCAAGGCCCAGCAGGCGGAAAACACCATGGCGGCCTTTTGTGCCGCTGCGCGCGCCGGC
GCCCACGCCATTGAAACCGACGTGCGGCTCTCGCGCGACGGCATTGCTGTCCTCTCGCATGATGCGTCGCTGCGG
CGCTGCTTTGGCGTCCAAGGCGAGGTGGCGGCGCGGGACTGGGCCCAGCTGGCGCGCCTGCGCACTGTGAGGGAT
GCGAGACAGGGCATGCCGCGTCTGCGAGACTTGTTGGCGTGGTTGGCGGGGAGGCCGTCTGATGGGGGGGCTGAG
GCGGGTGAGGGGGACGAGGTTGACGACGAGGTGAGGGAGAGGCTATGGGTCTTGTTGGATATAAAGATGGACGAC
GATGCGCAGACCCTCGTCGACGCCATTGCCACGGCCATTGCCCAGGTGCCTCCCTCGTCGGTGCCGTGGGAGCAG
CGCATCGTCCTCGGCTGCTGGAACGCTTCCACCGTCCGTGCCGCCCGCACTTCTCTCCCCACCTATCCCCTCTCC
CACATTGGCGTCTCCCTCTCGTACGCTTCCCACTTTGTCGCTCCGCCCGCGTCTCTCCCAGCCTTCAACCTCGCC
TACCCGCCTCTGCTCCTCCGTGGCACTTCTCTCCTCAATAAACTCCGCGCCGCTCGCCGCGCCGTCTTCCTCTGG
ACCCTAAACGATCAGACTTCCATGACCTGGGCCCTCGCCCTAAACACCTTGTCGTCCCTGCCCGACGACGCCGAC
GCCTCGCAGAAAGGCGCCCGCGTCGACGCCGTCATCTCGGATGATCCCGCCCTCTTCCTCGACGTGTGTGCAAAG
TTTGAGTCGCGCCTTGCGTCCAATCCCTCTGCTTCCCTTCATCATCCTCCACTCACTACGCGTGCTTCTATTCGT
CGTACTCTTGGCCTTGTTCTCATTCAGCTTCTCATGACTCTCATCTTCCTGTACCGCCGCTTTTGGTTGTACAGG
CTGGACTACATGAACGAAGCTACGCCATCCCGTCACTTGAAAAAGTAG
Gene >OphauB2|1999
ATGGAGACGGTGCCCCAAGGTGTGTCAGTCTTTTTCCCTCTTGTCTCGTCTTGTTTGGTGTCGTGTTTGCAGCGT
CTTGTTTGAGGAGGTGCAAAAGAAGCAAGGAGAAGCCAAAACACCAACAGATGCACCAGCAGCAGCATCCTTCAC
CGCCGCCCGCCCCTCGTCCAAATGTCCCAAGCTCCTCATCCCCCAGGCCGTTGCCCACCGCGGCTTCAAGGCCCA
GCAGGCGGAAAACACCATGGCGGCCTTTTGTGCCGCTGCGCGCGCCGGCGCCCACGCCATTGAAACCGACGTGCG
GCTCTCGCGCGACGGCATTGCTGTCCTCTCGCATGATGCGTCGCTGCGGCGCTGCTTTGGCGTCCAAGGCGAGGT
GGCGGCGCGGGACTGGGCCCAGCTGGCGCGCCTGCGCACTGTGAGGGATGCGAGACAGGGCATGCCGCGTCTGCG
AGACTTGTTGGCGTGGTTGGCGGGGAGGCCGTCTGATGGGGGGGCTGAGGCGGGTGAGGGGGACGAGGTTGACGA
CGAGGTGAGGGAGAGGCTATGGGTCTTGTTGGATATAAAGGTGAGGCAAAGAGGCCATTGGCAAAGAGGCCATTT
TCTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTCCTCTCTTCCTGCTTCTCTGGCTGGCATCGCCTC
GACTGCTACTAATGAAAATAATAGATGGACGACGATGCGCAGACCCTCGTCGACGCCATTGCCACGGCCATTGCC
CAGGTGCCTCCCTCGTCGGTGCCGTGGGAGCAGCGCATCGTCCTCGGCTGCTGGAACGTACGTCTTGGCCCCTTT
TTGCTCCTTTACCCTGCCCCTGGTCTTGTAGTGCCTATAGCTCTGCTTCCCAACCTATAACCCTCCTTTGCCTAT
ACCCGCTCTTGTCTATAACACGTCACAATATTCCCTCGGCATCTATACCCTCTCTGGCCCTATACTTCTCTTTTC
TATACCCTCTCTTGCTTACCCTCTGGGCTATACCACCTCCTGCTTACTCTCTCGCCTACCCTCTCTTGCCCATAA
CACGTCACAGCATCCCATCCCCATCTATACCACTCTTTTCTATACCCTCTCTCGCCTACATCATCTCATCAGTAC
CCTATCCATATCCATACCTTTTTCCTCACCTATACCCCCCCCCGACTCATAAGCACCCCCCCTAACTTACCTCTA
GGCTTCCACCGTCCGTGCCGCCCGCACTTCTCTCCCCACCTATCCCCTCTCCCACATTGGCGTCTCCCTCTCGTA
CGCTTCCCACTTTGTCGCTCCGCCCGCGTCTCTCCCAGCCTTCAACCTCGCCTACCCGCCTCTGCTCCTCCGTGG
CACTTCTCTCCTCAATAAACTCCGCGCCGCTCGCCGCGCCGTCTTCCTCTGGACCCTAAACGATCAGACTTCCAT
GACCTGGGCCCTCGCCCTAAACACCTTGTCGTCCCTGCCCGACGACGCCGACGCCTCGCAGAAAGGCGCCCGCGT
CGACGCCGTCATCTCGGATGATCCCGCCCTCTTCCTCGACGTGTGTGCAAAGTTTGAGTCGCGCCTTGCGTCCAA
TCCCTCTGCTTCCCTTCATCATCCTCCACTCACTACGCGTGCTTCTATTCGTCGTACTCTTGGCCTTGTTCTCAT
TCAGCTTCTCATGACTCTCATCTTCCTGTACCGCCGCTTTTGGTTGTACAGGCTGGACTACATGAACGAAGCTAC
GCCATCCCGTCACTTGAAAAAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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