© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|196 |
| Gene name | |
| Location | Contig_10:96917..97892 |
| Strand | - |
| Gene length (bp) | 975 |
| Transcript length (bp) | 975 |
| Coding sequence length (bp) | 975 |
| Protein length (aa) | 325 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-17 | 85 | 304 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P51563|TCR7_VIBAN | Tetracycline resistance protein, class G OS=Vibrio anguillarum GN=tetA PE=3 SV=1 | 102 | 309 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 143 | 165 | 22 |
| 2 | 180 | 202 | 22 |
| 3 | 207 | 229 | 22 |
| 4 | 274 | 296 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|196 MSATAQEERSLLHPETHAPDEALQHRVITTCVAMVILLDCAAFFMQGPQTNLLEQAICKRHYSFPFTPRDCTSGP VQAELATITQMLSTFDRIPSLIMSLPMGILADRYGRRPVLLLALLGSLLQDAVAKLVLWRSDVLPPRLIWLSPLA ALVGGGDAVASSMLLLVVADVAAAGRRARLFYLMMACGLVGEVVATPLSAWLMARNPWIPYLMYTVLTLIGSAIP LFFLPETLPKMMFHAYEAEARQNQQGASKSTLSTMALRLQSFLKPNILAVLFAFFVSALGTQLTSFLLQYIRQRF YWTYQKVSLLAQLHTHDFANIPPG* |
| Coding | >OphauB2|196 ATGTCGGCAACTGCGCAGGAAGAGCGCTCTTTACTTCATCCCGAAACTCATGCCCCTGATGAAGCTCTCCAACAC CGCGTCATTACAACATGCGTGGCCATGGTCATTCTCCTCGACTGCGCCGCCTTCTTCATGCAAGGCCCTCAGACC AACCTCTTGGAACAAGCCATTTGCAAACGCCACTACTCCTTCCCCTTTACACCCCGCGACTGCACCAGCGGCCCC GTCCAAGCCGAACTGGCCACCATTACCCAAATGCTCTCTACATTCGACCGAATACCCAGCCTCATCATGTCTCTA CCCATGGGCATTCTCGCCGACCGCTACGGCCGCCGTCCGGTACTTCTACTCGCCTTGCTCGGCAGCCTTTTGCAA GACGCCGTGGCCAAGCTTGTGCTCTGGCGCTCCGACGTCTTGCCGCCGCGACTCATCTGGCTCTCGCCGCTTGCT GCGCTGGTAGGCGGCGGTGATGCAGTGGCGAGTAGCATGCTTCTCCTCGTCGTGGCAGACGTGGCGGCGGCGGGA CGGCGGGCCAGGCTGTTTTACTTGATGATGGCGTGTGGGCTGGTGGGCGAGGTGGTTGCCACGCCATTGAGCGCG TGGCTCATGGCGAGGAATCCGTGGATACCGTATTTGATGTATACCGTCTTGACTTTGATCGGTAGTGCTATTCCG CTCTTCTTTTTGCCAGAGACGTTGCCCAAGATGATGTTTCATGCATATGAAGCCGAAGCGAGGCAAAACCAACAA GGCGCTTCGAAATCCACACTCTCAACCATGGCTTTGAGGCTGCAGTCGTTTTTGAAGCCCAACATTCTGGCCGTC TTATTTGCCTTTTTCGTCTCAGCTCTAGGGACTCAGCTGACGAGTTTTCTCTTACAATACATTCGCCAACGGTTT TACTGGACATATCAAAAAGTAAGTCTACTAGCACAACTCCATACCCATGACTTTGCCAACATTCCACCAGGCTAG |
| Transcript | >OphauB2|196 ATGTCGGCAACTGCGCAGGAAGAGCGCTCTTTACTTCATCCCGAAACTCATGCCCCTGATGAAGCTCTCCAACAC CGCGTCATTACAACATGCGTGGCCATGGTCATTCTCCTCGACTGCGCCGCCTTCTTCATGCAAGGCCCTCAGACC AACCTCTTGGAACAAGCCATTTGCAAACGCCACTACTCCTTCCCCTTTACACCCCGCGACTGCACCAGCGGCCCC GTCCAAGCCGAACTGGCCACCATTACCCAAATGCTCTCTACATTCGACCGAATACCCAGCCTCATCATGTCTCTA CCCATGGGCATTCTCGCCGACCGCTACGGCCGCCGTCCGGTACTTCTACTCGCCTTGCTCGGCAGCCTTTTGCAA GACGCCGTGGCCAAGCTTGTGCTCTGGCGCTCCGACGTCTTGCCGCCGCGACTCATCTGGCTCTCGCCGCTTGCT GCGCTGGTAGGCGGCGGTGATGCAGTGGCGAGTAGCATGCTTCTCCTCGTCGTGGCAGACGTGGCGGCGGCGGGA CGGCGGGCCAGGCTGTTTTACTTGATGATGGCGTGTGGGCTGGTGGGCGAGGTGGTTGCCACGCCATTGAGCGCG TGGCTCATGGCGAGGAATCCGTGGATACCGTATTTGATGTATACCGTCTTGACTTTGATCGGTAGTGCTATTCCG CTCTTCTTTTTGCCAGAGACGTTGCCCAAGATGATGTTTCATGCATATGAAGCCGAAGCGAGGCAAAACCAACAA GGCGCTTCGAAATCCACACTCTCAACCATGGCTTTGAGGCTGCAGTCGTTTTTGAAGCCCAACATTCTGGCCGTC TTATTTGCCTTTTTCGTCTCAGCTCTAGGGACTCAGCTGACGAGTTTTCTCTTACAATACATTCGCCAACGGTTT TACTGGACATATCAAAAAGTAAGTCTACTAGCACAACTCCATACCCATGACTTTGCCAACATTCCACCAGGCTAG |
| Gene | >OphauB2|196 ATGTCGGCAACTGCGCAGGAAGAGCGCTCTTTACTTCATCCCGAAACTCATGCCCCTGATGAAGCTCTCCAACAC CGCGTCATTACAACATGCGTGGCCATGGTCATTCTCCTCGACTGCGCCGCCTTCTTCATGCAAGGCCCTCAGACC AACCTCTTGGAACAAGCCATTTGCAAACGCCACTACTCCTTCCCCTTTACACCCCGCGACTGCACCAGCGGCCCC GTCCAAGCCGAACTGGCCACCATTACCCAAATGCTCTCTACATTCGACCGAATACCCAGCCTCATCATGTCTCTA CCCATGGGCATTCTCGCCGACCGCTACGGCCGCCGTCCGGTACTTCTACTCGCCTTGCTCGGCAGCCTTTTGCAA GACGCCGTGGCCAAGCTTGTGCTCTGGCGCTCCGACGTCTTGCCGCCGCGACTCATCTGGCTCTCGCCGCTTGCT GCGCTGGTAGGCGGCGGTGATGCAGTGGCGAGTAGCATGCTTCTCCTCGTCGTGGCAGACGTGGCGGCGGCGGGA CGGCGGGCCAGGCTGTTTTACTTGATGATGGCGTGTGGGCTGGTGGGCGAGGTGGTTGCCACGCCATTGAGCGCG TGGCTCATGGCGAGGAATCCGTGGATACCGTATTTGATGTATACCGTCTTGACTTTGATCGGTAGTGCTATTCCG CTCTTCTTTTTGCCAGAGACGTTGCCCAAGATGATGTTTCATGCATATGAAGCCGAAGCGAGGCAAAACCAACAA GGCGCTTCGAAATCCACACTCTCAACCATGGCTTTGAGGCTGCAGTCGTTTTTGAAGCCCAACATTCTGGCCGTC TTATTTGCCTTTTTCGTCTCAGCTCTAGGGACTCAGCTGACGAGTTTTCTCTTACAATACATTCGCCAACGGTTT TACTGGACATATCAAAAAGTAAGTCTACTAGCACAACTCCATACCCATGACTTTGCCAACATTCCACCAGGCTAG |