© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1952 |
| Gene name | |
| Location | Contig_158:19472..20519 |
| Strand | - |
| Gene length (bp) | 1047 |
| Transcript length (bp) | 792 |
| Coding sequence length (bp) | 792 |
| Protein length (aa) | 264 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 2.5E-18 | 6 | 198 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 3.9E-13 | 10 | 207 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P21158|CSGA_MYXXA | C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1 | 99 | 195 | 4.0E-13 |
| sp|Q7Z9I4|YCP6_SCHPO | Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1 | 7 | 240 | 8.0E-12 |
| sp|Q7Z9I2|YCP9_SCHPO | Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1 | 7 | 236 | 1.0E-11 |
| sp|Q9P7I6|YJNK_SCHPO | Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1 | 7 | 242 | 2.0E-11 |
| sp|Q7Z9I3|YCP8_SCHPO | Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1 | 7 | 236 | 3.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P21158|CSGA_MYXXA | C-factor OS=Myxococcus xanthus GN=csgA PE=1 SV=1 | 99 | 195 | 4.0E-13 |
| sp|Q7Z9I4|YCP6_SCHPO | Uncharacterized oxidoreductase C663.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.06c PE=3 SV=1 | 7 | 240 | 8.0E-12 |
| sp|Q7Z9I2|YCP9_SCHPO | Uncharacterized oxidoreductase C663.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.09c PE=3 SV=1 | 7 | 236 | 1.0E-11 |
| sp|Q9P7I6|YJNK_SCHPO | Uncharacterized oxidoreductase C24B10.20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC24B10.20 PE=3 SV=1 | 7 | 242 | 2.0E-11 |
| sp|Q7Z9I3|YCP8_SCHPO | Uncharacterized oxidoreductase C663.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC663.08c PE=3 SV=1 | 7 | 236 | 3.0E-11 |
| sp|P36086|YKH1_YEAST | Uncharacterized oxidoreductase YKL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL071W PE=1 SV=1 | 2 | 221 | 6.0E-10 |
| sp|Q00791|STCU_EMENI | Versicolorin reductase OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcU PE=3 SV=2 | 7 | 228 | 1.0E-09 |
| sp|P55336|FABG_VIBHA | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio harveyi GN=fabG PE=3 SV=1 | 7 | 203 | 1.0E-09 |
| sp|Q8K9J5|FABG_BUCAP | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) GN=fabG PE=3 SV=1 | 1 | 234 | 3.0E-08 |
| sp|P50161|AFLM_ASPPA | Versicolorin reductase 1 OS=Aspergillus parasiticus GN=ver1 PE=3 SV=2 | 7 | 228 | 7.0E-08 |
| sp|P0AEK3|FABG_SHIFL | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Shigella flexneri GN=fabG PE=3 SV=1 | 7 | 203 | 1.0E-07 |
| sp|P0AEK2|FABG_ECOLI | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1 | 7 | 203 | 1.0E-07 |
| sp|P37694|HETN_NOSS1 | Ketoacyl reductase HetN OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=hetN PE=3 SV=2 | 1 | 196 | 3.0E-07 |
| sp|P0A2C9|FABG_SALTY | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=fabG PE=1 SV=1 | 7 | 203 | 4.0E-07 |
| sp|P0A2D0|FABG_SALTI | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Salmonella typhi GN=fabG PE=3 SV=1 | 7 | 203 | 4.0E-07 |
| sp|Q89AG9|FABG_BUCBP | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) GN=fabG PE=3 SV=1 | 2 | 196 | 6.0E-07 |
| sp|P50170|RDH2_RAT | Retinol dehydrogenase 2 OS=Rattus norvegicus GN=Rdh2 PE=1 SV=1 | 97 | 228 | 1.0E-06 |
| sp|P25970|Y5909_MYXXD | Uncharacterized oxidoreductase MXAN_5909 OS=Myxococcus xanthus (strain DK 1622) GN=MXAN_5909 PE=3 SV=2 | 1 | 201 | 1.0E-06 |
| sp|Q9KQH7|FABG_VIBCH | 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabG PE=1 SV=2 | 7 | 196 | 3.0E-06 |
| sp|P39333|BDCA_ECOLI | Cyclic-di-GMP-binding biofilm dispersal mediator protein OS=Escherichia coli (strain K12) GN=bdcA PE=1 SV=2 | 1 | 230 | 3.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1952 MTRWSVLIVGATRGLGASLVRQYAQRQDTVVYATTRSNIVPSSFDEHVKWLTGVDLMDAGAGDGIVKQLNMGEAE ALSAVIISAGHFTSEDLGTGKGPNWSEEQRMYTTSAVAPVFITHRLVQAGLVRRQGGRIVLVSSEAGSIGLRHAN EGGGNYAHHGSKAALNMAGRLLSLDLEAEGIVVSMVHPGFMRTDMTAGVGFDKFWDQGHAVTADQAASSLIAWTD GLDMSKTGQLWAPRGPRDIGTAEAVMGANLPTPLQLPW* |
| Coding | >OphauB2|1952 ATGACGAGGTGGTCGGTGCTCATTGTTGGGGCTACACGAGGCCTAGGAGCGAGCCTGGTGAGGCAGTATGCGCAG CGCCAGGACACGGTGGTGTACGCAACAACCAGGTCCAACATTGTGCCGAGCAGCTTCGACGAGCATGTCAAGTGG CTGACGGGCGTGGACCTGATGGATGCCGGGGCGGGGGATGGTATTGTAAAGCAGCTAAACATGGGGGAAGCAGAG GCTCTCTCAGCCGTGATCATCTCGGCCGGACACTTCACCAGCGAGGACCTGGGCACGGGCAAAGGGCCCAACTGG AGCGAGGAGCAGCGCATGTACACGACGAGTGCCGTGGCGCCCGTCTTCATCACCCACCGGCTGGTGCAGGCGGGC TTGGTCAGGCGGCAGGGCGGGCGCATTGTGCTGGTGTCGTCCGAGGCGGGCAGCATCGGGCTGCGACACGCAAAC GAGGGCGGCGGCAACTACGCGCATCACGGCAGCAAGGCGGCGCTCAACATGGCGGGGCGGCTGCTGAGTCTTGAT CTCGAGGCCGAGGGCATCGTCGTGTCCATGGTGCATCCAGGCTTCATGCGCACCGACATGACGGCGGGCGTGGGC TTTGACAAGTTCTGGGACCAGGGCCACGCCGTCACTGCCGACCAGGCGGCCTCGAGCCTGATTGCCTGGACAGAC GGGCTCGACATGAGCAAGACGGGCCAGCTGTGGGCGCCGCGAGGACCGCGTGATATTGGCACGGCCGAGGCCGTC ATGGGCGCCAATCTGCCGACGCCACTCCAGCTGCCGTGGTGA |
| Transcript | >OphauB2|1952 ATGACGAGGTGGTCGGTGCTCATTGTTGGGGCTACACGAGGCCTAGGAGCGAGCCTGGTGAGGCAGTATGCGCAG CGCCAGGACACGGTGGTGTACGCAACAACCAGGTCCAACATTGTGCCGAGCAGCTTCGACGAGCATGTCAAGTGG CTGACGGGCGTGGACCTGATGGATGCCGGGGCGGGGGATGGTATTGTAAAGCAGCTAAACATGGGGGAAGCAGAG GCTCTCTCAGCCGTGATCATCTCGGCCGGACACTTCACCAGCGAGGACCTGGGCACGGGCAAAGGGCCCAACTGG AGCGAGGAGCAGCGCATGTACACGACGAGTGCCGTGGCGCCCGTCTTCATCACCCACCGGCTGGTGCAGGCGGGC TTGGTCAGGCGGCAGGGCGGGCGCATTGTGCTGGTGTCGTCCGAGGCGGGCAGCATCGGGCTGCGACACGCAAAC GAGGGCGGCGGCAACTACGCGCATCACGGCAGCAAGGCGGCGCTCAACATGGCGGGGCGGCTGCTGAGTCTTGAT CTCGAGGCCGAGGGCATCGTCGTGTCCATGGTGCATCCAGGCTTCATGCGCACCGACATGACGGCGGGCGTGGGC TTTGACAAGTTCTGGGACCAGGGCCACGCCGTCACTGCCGACCAGGCGGCCTCGAGCCTGATTGCCTGGACAGAC GGGCTCGACATGAGCAAGACGGGCCAGCTGTGGGCGCCGCGAGGACCGCGTGATATTGGCACGGCCGAGGCCGTC ATGGGCGCCAATCTGCCGACGCCACTCCAGCTGCCGTGGTGA |
| Gene | >OphauB2|1952 ATGACGAGGTGGTCGGTGCTCATTGTTGGGGCTACACGAGGCCTAGGAGCGAGCCTGGTGAGGCAGTATGCGCAG CGCCAGGACACGGTGGTGTACGCAACAACCAGGTCCAACATTGTGCCGAGCAGCTTCGACGAGCATGTCAAGTGG CTGACGGGCGTGGACCTGATGGATGCCGGGGCGGGGGATGGTATTGTAAAGCAGCTAAACATGGGGGAAGCAGAG GCTCTCTCAGCCGTGGTGCGCCGCCTGTCTACTCATGGTGTCTACTCATGGTGTCTAGTCTAGCTACTGACGCCG TCTACCGAGGGCATGCGAGGCAGATCATCTCGGCCGGACACTTCACCAGCGAGGACCTGGGCACGGGCAAAGGGC CCAACTGGAGCGAGGAGCAGCGCATGTACACGACGAGTGCCGTGGCGCCCGTCTTCATCACCCACCGGCTGGTGC AGGCGGGCTTGGTCAGGCGGCAGGGCGGGCGCATTGTGCTGGTGTCGTCCGAGGCGGGCAGCATCGGGCTGCGAC ACGCAAACGAGGGCGGCGGCAACTACGCGCATCACGGCAGCAAGGCGGCGCTCAACATGGCGGGGCGGCTGCTGA GTCTTGATCTCGAGGCCGAGGGCATCGTCGTGTCCATGGTGCATCCAGGCTTCATGCGCACCGACATGACGGCGG GCGTGGGCTTTGACAAGTTCTGGGACCAGGGCCACGGTGAGCCGCCTCTTGTGCCCTGGCGTAGCAGCTACCCAG GCGCCTGTCCCACTGCTTGTCCCCCCCGCTGCTTGTCCCCCCGCTGCTAGCAGCCATGCTAACCGTGTACCTGGC GCGAGGCTAGCCGTCACTGCCGACCAGGCGGCCTCGAGCCTGATTGCCTGGACAGACGGGCTCGACATGAGCAAG ACGGGCCAGCTGTGGGCGCCGCGAGGACCGCGTAAGTTGGCCCTCGACGGCTCGAGGCCCTCCACTGACGGCAGC GCAGGTGATATTGGCACGGCCGAGGCCGTCATGGGCGCCAATCTGCCGACGCCACTCCAGCTGCCGTGGTGA |