© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1945 |
| Gene name | |
| Location | Contig_158:3616..5122 |
| Strand | - |
| Gene length (bp) | 1506 |
| Transcript length (bp) | 1440 |
| Coding sequence length (bp) | 1440 |
| Protein length (aa) | 480 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08743 | Nse4_C | Nse4 C-terminal | 1.5E-30 | 372 | 461 |
| PF15412 | Nse4-Nse3_bdg | Binding domain of Nse4/EID3 to Nse3-MAGE | 8.3E-18 | 172 | 224 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A6QPC8|EID3_BOVIN | EP300-interacting inhibitor of differentiation 3 OS=Bos taurus GN=EID3 PE=2 SV=1 | 79 | 461 | 8.0E-22 |
| sp|Q9NXX6|NSE4A_HUMAN | Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN=NSMCE4A PE=1 SV=2 | 121 | 461 | 9.0E-22 |
| sp|Q6BDR8|NSE4_SCHPO | Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse4 PE=1 SV=1 | 120 | 478 | 8.0E-21 |
| sp|A5LFW4|EID3_MACFA | EP300-interacting inhibitor of differentiation 3 OS=Macaca fascicularis GN=EID3 PE=2 SV=1 | 118 | 463 | 9.0E-20 |
| sp|Q8N140|EID3_HUMAN | EP300-interacting inhibitor of differentiation 3 OS=Homo sapiens GN=EID3 PE=1 SV=1 | 118 | 463 | 3.0E-19 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|A6QPC8|EID3_BOVIN | EP300-interacting inhibitor of differentiation 3 OS=Bos taurus GN=EID3 PE=2 SV=1 | 79 | 461 | 8.0E-22 |
| sp|Q9NXX6|NSE4A_HUMAN | Non-structural maintenance of chromosomes element 4 homolog A OS=Homo sapiens GN=NSMCE4A PE=1 SV=2 | 121 | 461 | 9.0E-22 |
| sp|Q6BDR8|NSE4_SCHPO | Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nse4 PE=1 SV=1 | 120 | 478 | 8.0E-21 |
| sp|A5LFW4|EID3_MACFA | EP300-interacting inhibitor of differentiation 3 OS=Macaca fascicularis GN=EID3 PE=2 SV=1 | 118 | 463 | 9.0E-20 |
| sp|Q8N140|EID3_HUMAN | EP300-interacting inhibitor of differentiation 3 OS=Homo sapiens GN=EID3 PE=1 SV=1 | 118 | 463 | 3.0E-19 |
| sp|Q3V124|EID3_MOUSE | EP300-interacting inhibitor of differentiation 3 OS=Mus musculus GN=Eid3 PE=1 SV=1 | 118 | 463 | 8.0E-19 |
| sp|P43124|NSE4_YEAST | Non-structural maintenance of chromosome element 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSE4 PE=1 SV=1 | 255 | 461 | 8.0E-16 |
| sp|Q4V8G2|EID3_RAT | EP300-interacting inhibitor of differentiation 3 OS=Rattus norvegicus GN=Eid3 PE=2 SV=2 | 373 | 463 | 3.0E-13 |
| sp|Q2TBI1|NSE4A_BOVIN | Non-structural maintenance of chromosomes element 4 homolog A OS=Bos taurus GN=NSMCE4A PE=2 SV=1 | 378 | 461 | 5.0E-12 |
| sp|Q9C689|NSE4A_ARATH | Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana GN=NSE4A PE=2 SV=1 | 117 | 465 | 2.0E-11 |
| sp|F4JET1|NSE4B_ARATH | Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana GN=NSE4B PE=2 SV=1 | 114 | 464 | 2.0E-11 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 56 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1945 MPRRASQNGTGSDEDASRIATASQSLSPERVSSTTRVVSGSKRKRPSTTDDAWRRRQRTKDGDQDDQDQDDQDQD DRDDDDDDDDDDDDQDDQDDQDDSHVQDVSEDEDIYDPDQPLEERRNVQKGYRDLLRDLTENGDEYLNKDSKGLR ETILKADALSKKLRQTAEATIDSRLLVSTSDLSYRKALRLTRGSLSQGIDVDEFVSKCITYMRIGGGIADDCAPE LSSTQRQRRRAVSRGMGGDDDDVGDDGDMMNWPHLGRFACMSHIRRPALAGFLLGPLSVEKKPRKITKRSAPFRP DSLRETRPQELDVRELATKENDLTAICSKVMLRLNDVQQKAQETVADLIEDGMDDEEKIRIMHQHGLRSTGGIDL MRFVVNPKSFAQTVENMFYVSFLIRDGRIEIEFDDFELPALAPVDPEADNEGLSRHGAAKHQAVLSIDMKTWRDI TVTLGLTEPMIEHRKDVSGAGPGARGWYS* |
| Coding | >OphauB2|1945 ATGCCTCGACGCGCCAGCCAAAATGGCACTGGCTCCGATGAAGACGCATCCCGGATTGCCACGGCCTCACAGTCA TTATCCCCAGAACGAGTTTCTTCTACAACGCGCGTGGTTTCTGGGTCCAAAAGAAAGCGCCCGAGTACTACTGAC GACGCGTGGCGCCGACGGCAGAGGACCAAAGACGGGGACCAAGATGATCAAGACCAAGATGATCAAGACCAAGAT GACCGAGACGATGACGACGACGATGACGACGATGACGACGACCAAGACGACCAAGACGACCAAGACGACAGCCAC GTGCAAGACGTCTCGGAAGATGAAGACATCTACGACCCCGATCAGCCGCTCGAGGAGCGCCGCAACGTGCAAAAG GGCTATAGAGACTTGCTGCGGGACTTGACAGAAAATGGCGATGAGTACCTCAACAAGGACTCCAAAGGCCTGCGA GAAACCATCCTCAAGGCTGACGCCCTCTCCAAGAAGCTGAGACAGACAGCTGAGGCGACAATTGACTCGCGCCTC CTCGTCAGCACATCGGATCTCTCATATCGCAAGGCATTGCGCTTGACCCGCGGCAGTCTGTCTCAAGGCATCGAC GTGGACGAGTTTGTCTCCAAGTGCATAACTTATATGCGAATTGGTGGTGGAATTGCCGATGACTGCGCCCCCGAG CTCTCGAGTACCCAAAGACAGCGGCGACGAGCTGTCTCTCGAGGCATGGGCGGCGATGATGACGATGTCGGCGAT GACGGAGACATGATGAATTGGCCCCATCTCGGCCGCTTTGCTTGTATGTCGCACATACGCCGGCCAGCTTTGGCG GGATTCCTTCTCGGGCCGCTTTCTGTCGAGAAGAAGCCTCGAAAAATCACAAAGCGGAGTGCCCCATTTCGGCCC GATAGCCTCAGGGAAACGCGTCCACAGGAGCTCGATGTAAGAGAGCTGGCGACCAAAGAAAACGACTTGACTGCC ATCTGCTCCAAGGTCATGTTGCGCCTGAATGATGTGCAACAGAAAGCGCAGGAGACGGTTGCCGACTTGATCGAA GACGGCATGGACGACGAGGAAAAGATACGCATTATGCACCAGCACGGCCTACGCAGCACGGGGGGCATCGATCTA ATGCGCTTTGTCGTCAACCCCAAGTCATTTGCGCAGACAGTCGAGAACATGTTCTACGTCAGCTTCCTTATTCGT GATGGCAGGATAGAGATTGAATTCGACGACTTTGAGCTGCCTGCACTAGCACCCGTTGATCCAGAAGCAGACAAC GAGGGCCTTTCTCGGCATGGAGCTGCCAAGCACCAAGCTGTGTTATCTATAGACATGAAGACATGGCGCGACATC ACTGTAACCCTTGGTCTTACAGAGCCCATGATTGAGCACAGAAAAGACGTGTCGGGTGCAGGTCCTGGGGCCCGC GGGTGGTATAGCTGA |
| Transcript | >OphauB2|1945 ATGCCTCGACGCGCCAGCCAAAATGGCACTGGCTCCGATGAAGACGCATCCCGGATTGCCACGGCCTCACAGTCA TTATCCCCAGAACGAGTTTCTTCTACAACGCGCGTGGTTTCTGGGTCCAAAAGAAAGCGCCCGAGTACTACTGAC GACGCGTGGCGCCGACGGCAGAGGACCAAAGACGGGGACCAAGATGATCAAGACCAAGATGATCAAGACCAAGAT GACCGAGACGATGACGACGACGATGACGACGATGACGACGACCAAGACGACCAAGACGACCAAGACGACAGCCAC GTGCAAGACGTCTCGGAAGATGAAGACATCTACGACCCCGATCAGCCGCTCGAGGAGCGCCGCAACGTGCAAAAG GGCTATAGAGACTTGCTGCGGGACTTGACAGAAAATGGCGATGAGTACCTCAACAAGGACTCCAAAGGCCTGCGA GAAACCATCCTCAAGGCTGACGCCCTCTCCAAGAAGCTGAGACAGACAGCTGAGGCGACAATTGACTCGCGCCTC CTCGTCAGCACATCGGATCTCTCATATCGCAAGGCATTGCGCTTGACCCGCGGCAGTCTGTCTCAAGGCATCGAC GTGGACGAGTTTGTCTCCAAGTGCATAACTTATATGCGAATTGGTGGTGGAATTGCCGATGACTGCGCCCCCGAG CTCTCGAGTACCCAAAGACAGCGGCGACGAGCTGTCTCTCGAGGCATGGGCGGCGATGATGACGATGTCGGCGAT GACGGAGACATGATGAATTGGCCCCATCTCGGCCGCTTTGCTTGTATGTCGCACATACGCCGGCCAGCTTTGGCG GGATTCCTTCTCGGGCCGCTTTCTGTCGAGAAGAAGCCTCGAAAAATCACAAAGCGGAGTGCCCCATTTCGGCCC GATAGCCTCAGGGAAACGCGTCCACAGGAGCTCGATGTAAGAGAGCTGGCGACCAAAGAAAACGACTTGACTGCC ATCTGCTCCAAGGTCATGTTGCGCCTGAATGATGTGCAACAGAAAGCGCAGGAGACGGTTGCCGACTTGATCGAA GACGGCATGGACGACGAGGAAAAGATACGCATTATGCACCAGCACGGCCTACGCAGCACGGGGGGCATCGATCTA ATGCGCTTTGTCGTCAACCCCAAGTCATTTGCGCAGACAGTCGAGAACATGTTCTACGTCAGCTTCCTTATTCGT GATGGCAGGATAGAGATTGAATTCGACGACTTTGAGCTGCCTGCACTAGCACCCGTTGATCCAGAAGCAGACAAC GAGGGCCTTTCTCGGCATGGAGCTGCCAAGCACCAAGCTGTGTTATCTATAGACATGAAGACATGGCGCGACATC ACTGTAACCCTTGGTCTTACAGAGCCCATGATTGAGCACAGAAAAGACGTGTCGGGTGCAGGTCCTGGGGCCCGC GGGTGGTATAGCTGA |
| Gene | >OphauB2|1945 ATGCCTCGACGCGCCAGCCAAAATGGCACTGGCTCCGATGAAGACGCATCCCGGATTGCCACGGCCTCACAGTCA TTATCCCCAGAACGAGTTTCTTCTACAACGCGCGTGGTTTCTGGGTCCAAAAGAAAGCGCCCGAGTACTACTGAC GACGCGTGGCGCCGACGGCAGAGGACCAAAGACGGGGACCAAGATGATCAAGACCAAGATGATCAAGACCAAGAT GACCGAGACGATGACGACGACGATGACGACGATGACGACGACCAAGACGACCAAGACGACCAAGACGACAGCCAC GTGCAAGACGTCTCGGAAGATGAAGACATCTACGACCCCGATCAGCCGCTCGAGGAGCGCCGCAACGTGCAAAAG GGCTATAGAGACTTGCTGCGGGACTTGACAGAAAATGGCGATGAGTACCTCAACAAGGACTCCAAAGGCCTGCGA GAAACCATCCTCAAGGCTGACGCCCTCTCCAAGAAGCTGAGACAGACAGCTGAGGCGACAATTGACTCGCGCCTC CTCGTCAGCACATCGGATCTCTCATATCGCAAGGCATTGCGCTTGACCCGCGGCAGTCTGTCTCAAGGCATCGAC GTGGACGAGTTTGTCTCCAAGTGCATAACTTATATGCGAATTGGTGGTGGAATTGCCGATGACTGCGCCCCCGAG CTCTCGAGTACCCAAAGACAGCGGCGACGAGCTGTCTCTCGAGGCATGGGCGGCGATGATGACGATGTCGGCGAT GACGGAGACATGATGAATTGGCCCCATCTCGGCCGCTTTGCTTGTATGTCGCACATACGCCGGCCAGCTTTGGCG GGATTCCTTCTCGGGCCGCTTTCTGTCGAGAAGAAGCCTCGAAAAATCACAAAGCGGAGTGCCCCATTTCGGCCC GATAGCCTCAGGGAAACGCGTCCACAGGAGCTCGATGTAAGAGAGCTGGCGACCAAAGAAAACGACTTGACTGCC ATCTGCTCCAAGGTCATGTTGCGCCTGAATGATGTGCAACAGAAAGCGCAGGAGACGGTTGCCGACTTGATCGAA GACGGCATGGACGACGAGGAAAAGATACGCATTATGCACCAGCACGGCCTACGCAGCACGGGGGGCATCGATCTA ATGCGCTTTGTCGTCAACCCCAAGTCATTTGCGCAGACAGTCGAGAACATGTTCTACGTCAGCTTCCTTATTCGT GATGGCAGGATAGAGATTGAATTCGACGACTTTGAGCTGCCTGCACTAGGTGAGTCCATTTTTCACAGCCGTGGT TTGCTCATGTATTAGCCTGGCATTCTGACGCTCTCGACAGCACCCGTTGATCCAGAAGCAGACAACGAGGGCCTT TCTCGGCATGGAGCTGCCAAGCACCAAGCTGTGTTATCTATAGACATGAAGACATGGCGCGACATCACTGTAACC CTTGGTCTTACAGAGCCCATGATTGAGCACAGAAAAGACGTGTCGGGTGCAGGTCCTGGGGCCCGCGGGTGGTAT AGCTGA |