Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|1937
Gene name
Location	Contig_157:31386..33058
Strand	+
Gene length (bp)	1672
Transcript length (bp)	1614
Coding sequence length (bp)	1614
Protein length (aa)	538

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00890	FAD_binding_2	FAD binding domain	8.2E-40	11	505
PF01266	DAO	FAD dependent oxidoreductase	5.5E-12	11	271
PF12831	FAD_oxidored	FAD dependent oxidoreductase	7.7E-07	11	53
PF13450	NAD_binding_8	NAD(P)-binding Rossmann-like domain	3.1E-05	14	67
PF03486	HI0933_like	HI0933-like protein	7.0E-06	11	80

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q59327\|OASD_COMTE	3-oxo-5-alpha-steroid 4-dehydrogenase OS=Comamonas testosteroni PE=1 SV=1	26	500	1.0E-65
sp\|P83223\|FRDA_SHEON	Fumarate reductase flavoprotein subunit OS=Shewanella oneidensis (strain MR-1) GN=SO_0970 PE=1 SV=2	11	533	3.0E-19
sp\|Q07WU7\|FRDA_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2	24	533	3.0E-13
sp\|P0C278\|FRDA_SHEFR	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1	24	533	4.0E-13
sp\|Q9Z4P0\|FRD2_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=ifcA PE=1 SV=1	261	533	2.0E-12

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q59327\|OASD_COMTE	3-oxo-5-alpha-steroid 4-dehydrogenase OS=Comamonas testosteroni PE=1 SV=1	26	500	1.0E-65
sp\|P83223\|FRDA_SHEON	Fumarate reductase flavoprotein subunit OS=Shewanella oneidensis (strain MR-1) GN=SO_0970 PE=1 SV=2	11	533	3.0E-19
sp\|Q07WU7\|FRDA_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=fccA PE=1 SV=2	24	533	3.0E-13
sp\|P0C278\|FRDA_SHEFR	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina GN=fccA PE=1 SV=1	24	533	4.0E-13
sp\|Q9Z4P0\|FRD2_SHEFN	Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina (strain NCIMB 400) GN=ifcA PE=1 SV=1	261	533	2.0E-12
sp\|Q7D5C1\|3O1D2_MYCTO	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=kstD PE=1 SV=1	11	511	2.0E-09
sp\|P71864\|3O1D1_MYCTU	3-oxosteroid 1-dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=kstD PE=1 SV=3	11	511	3.0E-09
sp\|Q8CVD0\|URDA_SHEON	Urocanate reductase OS=Shewanella oneidensis (strain MR-1) GN=urdA PE=1 SV=1	264	533	2.0E-08
sp\|O13755\|OSM1_SCHPO	Fumarate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=osm1 PE=3 SV=1	264	535	1.0E-06
sp\|A0R4S9\|3O1D_MYCS2	3-oxosteroid 1-dehydrogenase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=ksdD PE=1 SV=1	11	164	1.0E-06

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GO

GO Term	Description	Terminal node
GO:0016491	oxidoreductase activity	Yes
GO:0003824	catalytic activity	No
GO:0003674	molecular_function	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 30	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	12	29	17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|1937 MANDTQTKKPDVIIVGGGLAGMCAAVAAAEEGASVTVLDCAFGGGASSISGGVVYAGGGTRYQAEAGYHDTPENM FCYLRHEAQDVVGEAVLRKFCNESVSNLEWLERHGARFSATMPPFRTGYPAGGYHLYYSGDEKAYPAAFLAKPAP RGHRTVGRGLGGMEMTGAALWGAIFDSALALGVRLEPASRVHRLLLDGQGRVKGVGYGCLEDSAAWLVASYKWLT QSANYYRTMFPSLSKVLSHVANVIWEHGAVQRSLEAPAVILAAGGFIMNREMTRTFIPWACETAPLGTAGDDGQG IRLGQSVGGRVSHMDRMSAWRFIYPPEALSEGIVVSRQGERIMAEDSYGAFLTEAMMTRAEGHGFLILDSLQWDK FKRQIKVQTRGLWRVFMNYIRLWHHQSAPTIEGLASKFSIQPSKLRESIEAHNTAIIKGEADVMQKLNYRCVIAS PPFYGIDISVRPSGFMMVVALTLGGLDVDGETGLVLDEAGKTISGLYAAGRNAVGICSNRYVSGLSLADCVFSGR RAGHHAVQTLAM*
Coding	>OphauB2\|1937 ATGGCAAACGACACGCAGACCAAGAAGCCAGACGTCATCATTGTCGGAGGCGGCCTTGCGGGCATGTGCGCCGCC GTGGCGGCTGCTGAAGAGGGCGCATCCGTCACGGTTCTAGATTGCGCCTTTGGAGGAGGCGCATCGTCCATTTCC GGGGGCGTGGTGTACGCAGGAGGCGGGACAAGGTATCAAGCCGAGGCGGGATATCACGACACTCCCGAAAACATG TTTTGCTATCTGAGGCATGAAGCCCAAGACGTTGTTGGCGAAGCTGTGCTGAGAAAGTTTTGCAACGAGAGCGTT TCTAACCTGGAGTGGTTGGAGCGACACGGGGCGAGATTCTCGGCAACTATGCCGCCGTTTAGGACGGGGTATCCT GCGGGAGGATACCATCTCTATTACTCGGGCGATGAAAAGGCGTATCCTGCGGCCTTCTTGGCCAAGCCGGCGCCA CGGGGCCATCGAACCGTGGGTCGAGGGCTTGGCGGCATGGAAATGACGGGAGCGGCTCTCTGGGGCGCTATTTTC GATTCGGCATTGGCGTTGGGTGTCAGGCTCGAGCCAGCAAGCAGGGTGCACAGGTTGTTGCTTGACGGCCAGGGG CGGGTAAAGGGAGTGGGCTATGGGTGCCTCGAGGACTCTGCTGCATGGCTTGTCGCGTCGTACAAGTGGCTGACG CAGAGTGCCAACTATTATCGAACCATGTTTCCCTCCTTGTCCAAGGTGTTGAGCCATGTTGCCAATGTTATTTGG GAGCATGGTGCTGTGCAAAGGTCACTCGAGGCGCCTGCGGTTATTCTGGCGGCTGGCGGCTTCATCATGAATCGT GAAATGACGCGCACCTTTATCCCTTGGGCTTGCGAGACGGCGCCACTGGGAACGGCGGGCGATGACGGGCAAGGC ATCCGACTCGGCCAATCAGTCGGCGGACGCGTCTCGCACATGGACCGCATGTCTGCATGGAGATTTATCTATCCG CCCGAAGCCCTAAGCGAGGGCATCGTGGTATCTCGCCAGGGAGAGAGAATCATGGCCGAAGACTCGTACGGTGCG TTTTTAACAGAAGCCATGATGACGCGAGCCGAGGGACACGGCTTCCTGATTCTCGACTCGTTGCAGTGGGACAAA TTCAAGAGGCAAATCAAAGTCCAGACACGGGGCCTGTGGAGAGTGTTTATGAATTACATTAGGTTGTGGCATCAT CAAAGCGCACCAACCATTGAGGGGCTGGCAAGCAAGTTTTCAATACAGCCAAGCAAGCTGCGGGAAAGCATAGAA GCGCACAACACGGCCATTATCAAGGGCGAGGCAGATGTGATGCAAAAGCTGAATTATCGATGCGTCATTGCCTCG CCCCCCTTTTACGGCATTGATATATCTGTGAGGCCGAGCGGCTTCATGATGGTGGTGGCGCTGACTCTGGGCGGG CTGGATGTTGACGGGGAGACGGGCTTGGTGCTTGACGAGGCAGGCAAGACGATTTCAGGACTGTATGCTGCTGGG AGGAATGCGGTTGGAATCTGCTCGAATCGCTACGTGTCGGGCTTGTCTCTTGCAGATTGTGTGTTTTCGGGACGA AGAGCGGGACACCATGCTGTCCAGACACTGGCAATGTAG
Transcript	>OphauB2\|1937 ATGGCAAACGACACGCAGACCAAGAAGCCAGACGTCATCATTGTCGGAGGCGGCCTTGCGGGCATGTGCGCCGCC GTGGCGGCTGCTGAAGAGGGCGCATCCGTCACGGTTCTAGATTGCGCCTTTGGAGGAGGCGCATCGTCCATTTCC GGGGGCGTGGTGTACGCAGGAGGCGGGACAAGGTATCAAGCCGAGGCGGGATATCACGACACTCCCGAAAACATG TTTTGCTATCTGAGGCATGAAGCCCAAGACGTTGTTGGCGAAGCTGTGCTGAGAAAGTTTTGCAACGAGAGCGTT TCTAACCTGGAGTGGTTGGAGCGACACGGGGCGAGATTCTCGGCAACTATGCCGCCGTTTAGGACGGGGTATCCT GCGGGAGGATACCATCTCTATTACTCGGGCGATGAAAAGGCGTATCCTGCGGCCTTCTTGGCCAAGCCGGCGCCA CGGGGCCATCGAACCGTGGGTCGAGGGCTTGGCGGCATGGAAATGACGGGAGCGGCTCTCTGGGGCGCTATTTTC GATTCGGCATTGGCGTTGGGTGTCAGGCTCGAGCCAGCAAGCAGGGTGCACAGGTTGTTGCTTGACGGCCAGGGG CGGGTAAAGGGAGTGGGCTATGGGTGCCTCGAGGACTCTGCTGCATGGCTTGTCGCGTCGTACAAGTGGCTGACG CAGAGTGCCAACTATTATCGAACCATGTTTCCCTCCTTGTCCAAGGTGTTGAGCCATGTTGCCAATGTTATTTGG GAGCATGGTGCTGTGCAAAGGTCACTCGAGGCGCCTGCGGTTATTCTGGCGGCTGGCGGCTTCATCATGAATCGT GAAATGACGCGCACCTTTATCCCTTGGGCTTGCGAGACGGCGCCACTGGGAACGGCGGGCGATGACGGGCAAGGC ATCCGACTCGGCCAATCAGTCGGCGGACGCGTCTCGCACATGGACCGCATGTCTGCATGGAGATTTATCTATCCG CCCGAAGCCCTAAGCGAGGGCATCGTGGTATCTCGCCAGGGAGAGAGAATCATGGCCGAAGACTCGTACGGTGCG TTTTTAACAGAAGCCATGATGACGCGAGCCGAGGGACACGGCTTCCTGATTCTCGACTCGTTGCAGTGGGACAAA TTCAAGAGGCAAATCAAAGTCCAGACACGGGGCCTGTGGAGAGTGTTTATGAATTACATTAGGTTGTGGCATCAT CAAAGCGCACCAACCATTGAGGGGCTGGCAAGCAAGTTTTCAATACAGCCAAGCAAGCTGCGGGAAAGCATAGAA GCGCACAACACGGCCATTATCAAGGGCGAGGCAGATGTGATGCAAAAGCTGAATTATCGATGCGTCATTGCCTCG CCCCCCTTTTACGGCATTGATATATCTGTGAGGCCGAGCGGCTTCATGATGGTGGTGGCGCTGACTCTGGGCGGG CTGGATGTTGACGGGGAGACGGGCTTGGTGCTTGACGAGGCAGGCAAGACGATTTCAGGACTGTATGCTGCTGGG AGGAATGCGGTTGGAATCTGCTCGAATCGCTACGTGTCGGGCTTGTCTCTTGCAGATTGTGTGTTTTCGGGACGA AGAGCGGGACACCATGCTGTCCAGACACTGGCAATGTAG
Gene	>OphauB2\|1937 ATGGCAAACGACACGCAGACCAAGAAGCCAGACGTCATCATTGTCGGAGGCGGCCTTGCGGGCATGTGCGCCGCC GTGGCGGCTGCTGAAGAGGGCGCATCCGTCACGGTTCTAGATTGCGCCTTTGGAGGAGGCGCATCGTCCATTTCC GGGGGCGTGGTGTACGCAGGAGGCGGGACAAGGTATCAAGCCGAGGCGGGATATCACGACACTCCCGAAAACATG TTTTGCTATCTGAGGCATGAAGCCCAAGACGTTGTTGGCGAAGCTGTGCTGAGAAAGTTTTGCAACGAGAGCGTT TCTAACCTGGAGTGGTTGGAGCGACACGGGGCGAGATTCTCGGCAACTATGCCGCCGTTTAGGACGGGGTATCCT GCGGGAGGATACCATCTCTATTACTCGGGCGATGAAAAGGCGTATCCTGCGGCCTTCTTGGCCAAGCCGGCGCCA CGGGGCCATCGAACCGTGGGTCGAGGGCTTGGCGGCATGGAAATGACGGGAGCGGCTCTCTGGGGCGCTATTTTC GATTCGGCATTGGCGTTGGGTGTCAGGCTCGAGCCAGCAAGCAGGGTGCACAGGTTGTTGCTTGACGGCCAGGGG CGGGTAAAGGGAGTGGGCTATGGGTGCCTCGAGGACTCTGCTGCATGGCTTGTCGCGTCGTACAAGTGGCTGACG CAGAGTGCCAACTATTATCGAACCATGTTTCCCTCCTTGTCCAAGGTGTTGAGCCATGTTGCCAATGTTATTTGG GAGCATGGTGCTGTGCAAAGGTCACTCGAGGCGCCTGCGGTTATTCTGGCGGCTGGCGGCTTCATCAGTGAGTGC TTCACCAGTCTGATTCTGCCATGCTTTGCTCATGCTCATGGACGGCCAAGTGAATCGTGAAATGACGCGCACCTT TATCCCTTGGGCTTGCGAGACGGCGCCACTGGGAACGGCGGGCGATGACGGGCAAGGCATCCGACTCGGCCAATC AGTCGGCGGACGCGTCTCGCACATGGACCGCATGTCTGCATGGAGATTTATCTATCCGCCCGAAGCCCTAAGCGA GGGCATCGTGGTATCTCGCCAGGGAGAGAGAATCATGGCCGAAGACTCGTACGGTGCGTTTTTAACAGAAGCCAT GATGACGCGAGCCGAGGGACACGGCTTCCTGATTCTCGACTCGTTGCAGTGGGACAAATTCAAGAGGCAAATCAA AGTCCAGACACGGGGCCTGTGGAGAGTGTTTATGAATTACATTAGGTTGTGGCATCATCAAAGCGCACCAACCAT TGAGGGGCTGGCAAGCAAGTTTTCAATACAGCCAAGCAAGCTGCGGGAAAGCATAGAAGCGCACAACACGGCCAT TATCAAGGGCGAGGCAGATGTGATGCAAAAGCTGAATTATCGATGCGTCATTGCCTCGCCCCCCTTTTACGGCAT TGATATATCTGTGAGGCCGAGCGGCTTCATGATGGTGGTGGCGCTGACTCTGGGCGGGCTGGATGTTGACGGGGA GACGGGCTTGGTGCTTGACGAGGCAGGCAAGACGATTTCAGGACTGTATGCTGCTGGGAGGAATGCGGTTGGAAT CTGCTCGAATCGCTACGTGTCGGGCTTGTCTCTTGCAGATTGTGTGTTTTCGGGACGAAGAGCGGGACACCATGC TGTCCAGACACTGGCAATGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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