Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1878
Gene name
LocationContig_154:19430..21250
Strand+
Gene length (bp)1820
Transcript length (bp)1593
Coding sequence length (bp)1593
Protein length (aa) 531

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07478 Dala_Dala_lig_C D-ala D-ala ligase C-terminus 1.3E-12 125 279
PF13649 Methyltransf_25 Methyltransferase domain 3.5E-09 365 454
PF13847 Methyltransf_31 Methyltransferase domain 2.3E-07 363 457
PF08241 Methyltransf_11 Methyltransferase domain 1.1E-05 366 440
PF02655 ATP-grasp_3 ATP-grasp domain 1.8E-05 104 277

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q12EL3|DDL_POLSJ D-alanine--D-alanine ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ddl PE=3 SV=1 127 279 3.0E-07
sp|B1XT11|DDL_POLNS D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) GN=ddl PE=3 SV=1 55 279 6.0E-07
sp|Q023Q5|DDL_SOLUE D-alanine--D-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=ddl PE=3 SV=1 126 285 1.0E-06
sp|B3QMS4|DDL_CHLP8 D-alanine--D-alanine ligase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ddl PE=3 SV=1 126 284 2.0E-06
sp|Q8PCJ8|DDLB_XANCP D-alanine--D-alanine ligase B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ddlB PE=3 SV=1 56 279 4.0E-06
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Swissprot ID Swissprot Description Start End E-value
sp|Q12EL3|DDL_POLSJ D-alanine--D-alanine ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ddl PE=3 SV=1 127 279 3.0E-07
sp|B1XT11|DDL_POLNS D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) GN=ddl PE=3 SV=1 55 279 6.0E-07
sp|Q023Q5|DDL_SOLUE D-alanine--D-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=ddl PE=3 SV=1 126 285 1.0E-06
sp|B3QMS4|DDL_CHLP8 D-alanine--D-alanine ligase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ddl PE=3 SV=1 126 284 2.0E-06
sp|Q8PCJ8|DDLB_XANCP D-alanine--D-alanine ligase B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ddlB PE=3 SV=1 56 279 4.0E-06
sp|A4SV76|DDL_POLSQ D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=ddl PE=3 SV=1 55 279 9.0E-06
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GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0008716 D-alanine-D-alanine ligase activity Yes
GO:0008168 methyltransferase activity Yes
GO:0046872 metal ion binding Yes
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0000166 nucleotide binding No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0097367 carbohydrate derivative binding No
GO:0043169 cation binding No
GO:0017076 purine nucleotide binding No
GO:0003824 catalytic activity No
GO:0016879 ligase activity, forming carbon-nitrogen bonds No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0032555 purine ribonucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0016874 ligase activity No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0016881 acid-amino acid ligase activity No
GO:0030554 adenyl nucleotide binding No
GO:0016740 transferase activity No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup7001
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6278
Ophiocordyceps australis map64 (Brazil) OphauB2|1878 (this protein)
Ophiocordyceps subramaniannii Hirsu2|325

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1878
MKICLINSSYEGANSPFEAASYDPLPDPSRYIPEGRHEFVSKFVTKANAKAEIDEICKEKYDLFFNYMWGLESDN
VAGLDATLYLESKGIPILGQPSSFLSKTKLHLAKAAKLSGLRMPQNTPGKYPKIVKHATTCGSLGLDYDSVCHDE
AAVKRRIAHLQQVDDTPLLVSDYITGAECSAMVIETGRDVVALTPLKYVFPPGTPPEQAFLTWHNKFEACEDGTI
TYALVEGKEKASLQKAAVDAFKALKIKGGAWARVDMRLEDGTNDVYVLEVNSIPVVFYPRGNKLGDDLVVEETFP
GAHLAFMDMLLATKMMQLGLHKKQTKHLASVYDKFAPSYDGVWRAAGLRKVQELMVRKFDFGGTVLDLACGTGAV
GRVLHEAGIEAEITGIEVSEGMLQSSPDIHQHYKQPIIVGPMEEEIMTAGPHDHVVCFGALHFLQPVMFNAVLAK
MFMLARKSVSFDIDDVPPSYIDFLRDNHGQLFINYNHVEEMEQFGVPKAWKLVHKSHEFLFTSPHAGHDIFGYAL
RFERL*
Coding >OphauB2|1878
ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTTATGACCCTCTG
CCGGATCCGAGTCGCTACATTCCCGAGGGGCGCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAG
GCTGAGATTGACGAGATTTGCAAGGAAAAGTATGACTTGTTTTTCAACTACATGTGGGGCCTCGAGTCGGACAAT
GTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGCCAGCCGTCCAGCTTTCTA
TCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCGCAAAATACGCCTGGCAAA
TACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGACTCCGTCTGCCACGACGAG
GCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTAGTTTCCGACTACATCACT
GGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACGCCGCTCAAGTACGTCTTC
CCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCCTGTGAGGATGGAACAATC
ACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGACGCCTTCAAGGCCCTCAAG
ATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGACGTCTATGTGCTCGAGGTC
AACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTGGTGGAAGAAACCTTTCCC
GGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGCCTGCACAAGAAGCAGACC
AAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGTGCTGCCGGCCTGCGCAAG
GTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCCTGTGGCACTGGGGCCGTT
GGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCAGAGGGCATGCTGCAGTCG
TCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAGGAAATCATGACTGCCGGC
CCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCAAG
ATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCCGC
GACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCATGG
AAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCTTG
CGTTTTGAGCGGCTTTAG
Transcript >OphauB2|1878
ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTTATGACCCTCTG
CCGGATCCGAGTCGCTACATTCCCGAGGGGCGCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAG
GCTGAGATTGACGAGATTTGCAAGGAAAAGTATGACTTGTTTTTCAACTACATGTGGGGCCTCGAGTCGGACAAT
GTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGCCAGCCGTCCAGCTTTCTA
TCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCGCAAAATACGCCTGGCAAA
TACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGACTCCGTCTGCCACGACGAG
GCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTAGTTTCCGACTACATCACT
GGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACGCCGCTCAAGTACGTCTTC
CCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCCTGTGAGGATGGAACAATC
ACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGACGCCTTCAAGGCCCTCAAG
ATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGACGTCTATGTGCTCGAGGTC
AACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTGGTGGAAGAAACCTTTCCC
GGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGCCTGCACAAGAAGCAGACC
AAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGTGCTGCCGGCCTGCGCAAG
GTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCCTGTGGCACTGGGGCCGTT
GGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCAGAGGGCATGCTGCAGTCG
TCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAGGAAATCATGACTGCCGGC
CCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCAAG
ATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCCGC
GACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCATGG
AAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCTTG
CGTTTTGAGCGGCTTTAG
Gene >OphauB2|1878
ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTGTGTCTGGCTGG
TGCCCGGTGTTTGTGGGCTGACTGATTTTCAGTATGACCCTCTGCCGGATCCGAGTCGCTACATTCCCGAGGGGC
GCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAGGCTGAGATTGACGAGATTTGCAAGGAAAAGT
ATGACTTGTTTTTCAACTACATGGTACGCTTGACTCTTTTCCATATTCTCCTCCTCTTGTACTCTATACGGCGCG
TCTACTCCATGATGCATCTACCCTCTACTACCTCTACTAATACTTACGACTGGTTGCTCATCTTTGCTGCAGTGG
GGCCTCGAGTCGGACAATGTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGC
CAGCCGTCCAGCTTTCTATCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCG
CAAAATACGCCTGGCAAATACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGAC
TCCGTCTGCCACGACGAGGCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTA
GTTTCCGACTACATCACTGGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACG
CCGCTCAAGTACGTCTTCCCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCC
TGTGAGGATGGAACAATCACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGAC
GCCTTCAAGGCCCTCAAGATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGAC
GTCTATGTGCTCGAGGTCAACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTG
GTGGAAGAAACCTTTCCCGGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGC
CTGCACAAGAAGCAGACCAAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGT
GCTGCCGGCCTGCGCAAGGTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCC
TGTGGCACTGGGGCCGTTGGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCA
GAGGGCATGCTGCAGTCGTCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAG
GAAATCATGGTGAGTCGAGTCGAGTCTCCAGACGCGTAGAGGCCGCCATTTGACATGTCCTTGTCCAGACTGCCG
GCCCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCA
AGATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCC
GCGACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCAT
GGAAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCT
TGCGTTTTGAGCGGCTTTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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