Protein ID | OphauB2|1878 |
Gene name | |
Location | Contig_154:19430..21250 |
Strand | + |
Gene length (bp) | 1820 |
Transcript length (bp) | 1593 |
Coding sequence length (bp) | 1593 |
Protein length (aa) | 531 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07478 | Dala_Dala_lig_C | D-ala D-ala ligase C-terminus | 1.3E-12 | 125 | 279 |
PF13649 | Methyltransf_25 | Methyltransferase domain | 3.5E-09 | 365 | 454 |
PF13847 | Methyltransf_31 | Methyltransferase domain | 2.3E-07 | 363 | 457 |
PF08241 | Methyltransf_11 | Methyltransferase domain | 1.1E-05 | 366 | 440 |
PF02655 | ATP-grasp_3 | ATP-grasp domain | 1.8E-05 | 104 | 277 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q12EL3|DDL_POLSJ | D-alanine--D-alanine ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ddl PE=3 SV=1 | 127 | 279 | 3.0E-07 |
sp|B1XT11|DDL_POLNS | D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) GN=ddl PE=3 SV=1 | 55 | 279 | 6.0E-07 |
sp|Q023Q5|DDL_SOLUE | D-alanine--D-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=ddl PE=3 SV=1 | 126 | 285 | 1.0E-06 |
sp|B3QMS4|DDL_CHLP8 | D-alanine--D-alanine ligase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ddl PE=3 SV=1 | 126 | 284 | 2.0E-06 |
sp|Q8PCJ8|DDLB_XANCP | D-alanine--D-alanine ligase B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ddlB PE=3 SV=1 | 56 | 279 | 4.0E-06 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q12EL3|DDL_POLSJ | D-alanine--D-alanine ligase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=ddl PE=3 SV=1 | 127 | 279 | 3.0E-07 |
sp|B1XT11|DDL_POLNS | D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. necessarius (strain STIR1) GN=ddl PE=3 SV=1 | 55 | 279 | 6.0E-07 |
sp|Q023Q5|DDL_SOLUE | D-alanine--D-alanine ligase OS=Solibacter usitatus (strain Ellin6076) GN=ddl PE=3 SV=1 | 126 | 285 | 1.0E-06 |
sp|B3QMS4|DDL_CHLP8 | D-alanine--D-alanine ligase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ddl PE=3 SV=1 | 126 | 284 | 2.0E-06 |
sp|Q8PCJ8|DDLB_XANCP | D-alanine--D-alanine ligase B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ddlB PE=3 SV=1 | 56 | 279 | 4.0E-06 |
sp|A4SV76|DDL_POLSQ | D-alanine--D-alanine ligase OS=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) GN=ddl PE=3 SV=1 | 55 | 279 | 9.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005524 | ATP binding | Yes |
GO:0008716 | D-alanine-D-alanine ligase activity | Yes |
GO:0008168 | methyltransferase activity | Yes |
GO:0046872 | metal ion binding | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0000166 | nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0032553 | ribonucleotide binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0043169 | cation binding | No |
GO:0017076 | purine nucleotide binding | No |
GO:0003824 | catalytic activity | No |
GO:0016879 | ligase activity, forming carbon-nitrogen bonds | No |
GO:0043168 | anion binding | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0036094 | small molecule binding | No |
GO:0016874 | ligase activity | No |
GO:0016741 | transferase activity, transferring one-carbon groups | No |
GO:0016881 | acid-amino acid ligase activity | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0016740 | transferase activity | No |
Orthofinder run ID | 4 |
Orthogroup | 7001 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps australis 1348a (Ghana) | OphauG2|6278 |
Ophiocordyceps australis map64 (Brazil) | OphauB2|1878 (this protein) |
Ophiocordyceps subramaniannii | Hirsu2|325 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|1878 MKICLINSSYEGANSPFEAASYDPLPDPSRYIPEGRHEFVSKFVTKANAKAEIDEICKEKYDLFFNYMWGLESDN VAGLDATLYLESKGIPILGQPSSFLSKTKLHLAKAAKLSGLRMPQNTPGKYPKIVKHATTCGSLGLDYDSVCHDE AAVKRRIAHLQQVDDTPLLVSDYITGAECSAMVIETGRDVVALTPLKYVFPPGTPPEQAFLTWHNKFEACEDGTI TYALVEGKEKASLQKAAVDAFKALKIKGGAWARVDMRLEDGTNDVYVLEVNSIPVVFYPRGNKLGDDLVVEETFP GAHLAFMDMLLATKMMQLGLHKKQTKHLASVYDKFAPSYDGVWRAAGLRKVQELMVRKFDFGGTVLDLACGTGAV GRVLHEAGIEAEITGIEVSEGMLQSSPDIHQHYKQPIIVGPMEEEIMTAGPHDHVVCFGALHFLQPVMFNAVLAK MFMLARKSVSFDIDDVPPSYIDFLRDNHGQLFINYNHVEEMEQFGVPKAWKLVHKSHEFLFTSPHAGHDIFGYAL RFERL* |
Coding | >OphauB2|1878 ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTTATGACCCTCTG CCGGATCCGAGTCGCTACATTCCCGAGGGGCGCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAG GCTGAGATTGACGAGATTTGCAAGGAAAAGTATGACTTGTTTTTCAACTACATGTGGGGCCTCGAGTCGGACAAT GTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGCCAGCCGTCCAGCTTTCTA TCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCGCAAAATACGCCTGGCAAA TACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGACTCCGTCTGCCACGACGAG GCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTAGTTTCCGACTACATCACT GGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACGCCGCTCAAGTACGTCTTC CCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCCTGTGAGGATGGAACAATC ACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGACGCCTTCAAGGCCCTCAAG ATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGACGTCTATGTGCTCGAGGTC AACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTGGTGGAAGAAACCTTTCCC GGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGCCTGCACAAGAAGCAGACC AAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGTGCTGCCGGCCTGCGCAAG GTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCCTGTGGCACTGGGGCCGTT GGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCAGAGGGCATGCTGCAGTCG TCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAGGAAATCATGACTGCCGGC CCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCAAG ATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCCGC GACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCATGG AAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCTTG CGTTTTGAGCGGCTTTAG |
Transcript | >OphauB2|1878 ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTTATGACCCTCTG CCGGATCCGAGTCGCTACATTCCCGAGGGGCGCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAG GCTGAGATTGACGAGATTTGCAAGGAAAAGTATGACTTGTTTTTCAACTACATGTGGGGCCTCGAGTCGGACAAT GTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGCCAGCCGTCCAGCTTTCTA TCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCGCAAAATACGCCTGGCAAA TACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGACTCCGTCTGCCACGACGAG GCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTAGTTTCCGACTACATCACT GGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACGCCGCTCAAGTACGTCTTC CCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCCTGTGAGGATGGAACAATC ACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGACGCCTTCAAGGCCCTCAAG ATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGACGTCTATGTGCTCGAGGTC AACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTGGTGGAAGAAACCTTTCCC GGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGCCTGCACAAGAAGCAGACC AAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGTGCTGCCGGCCTGCGCAAG GTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCCTGTGGCACTGGGGCCGTT GGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCAGAGGGCATGCTGCAGTCG TCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAGGAAATCATGACTGCCGGC CCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCAAG ATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCCGC GACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCATGG AAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCTTG CGTTTTGAGCGGCTTTAG |
Gene | >OphauB2|1878 ATGAAAATTTGTCTCATAAACTCGTCCTATGAGGGCGCCAACTCGCCCTTTGAAGCGGCGAGTGTGTCTGGCTGG TGCCCGGTGTTTGTGGGCTGACTGATTTTCAGTATGACCCTCTGCCGGATCCGAGTCGCTACATTCCCGAGGGGC GCCATGAGTTTGTGTCCAAGTTTGTCACAAAGGCCAATGCCAAGGCTGAGATTGACGAGATTTGCAAGGAAAAGT ATGACTTGTTTTTCAACTACATGGTACGCTTGACTCTTTTCCATATTCTCCTCCTCTTGTACTCTATACGGCGCG TCTACTCCATGATGCATCTACCCTCTACTACCTCTACTAATACTTACGACTGGTTGCTCATCTTTGCTGCAGTGG GGCCTCGAGTCGGACAATGTTGCCGGCCTCGACGCCACCCTCTACCTAGAGAGCAAGGGCATCCCCATTCTGGGC CAGCCGTCCAGCTTTCTATCCAAGACCAAGCTGCATCTTGCCAAGGCGGCCAAGCTATCGGGACTGCGCATGCCG CAAAATACGCCTGGCAAATACCCCAAAATCGTCAAACATGCCACGACTTGCGGCTCGCTTGGACTCGACTACGAC TCCGTCTGCCACGACGAGGCGGCTGTCAAGCGACGGATAGCCCATCTCCAGCAGGTCGACGACACTCCTCTCCTA GTTTCCGACTACATCACTGGCGCCGAGTGCTCAGCCATGGTGATTGAGACGGGAAGAGACGTGGTGGCGCTGACG CCGCTCAAGTACGTCTTCCCCCCGGGCACTCCACCAGAACAGGCCTTTTTGACGTGGCACAACAAATTCGAGGCC TGTGAGGATGGAACAATCACCTATGCTCTAGTCGAGGGCAAGGAAAAGGCCAGTCTGCAAAAGGCAGCCGTTGAC GCCTTCAAGGCCCTCAAGATCAAGGGCGGGGCCTGGGCACGAGTCGACATGCGGCTTGAAGACGGCACAAACGAC GTCTATGTGCTCGAGGTCAACTCGATCCCCGTCGTCTTCTACCCCAGGGGGAACAAGCTGGGCGACGACTTGGTG GTGGAAGAAACCTTTCCCGGCGCCCATCTGGCCTTTATGGATATGCTGCTGGCAACCAAGATGATGCAGCTGGGC CTGCACAAGAAGCAGACCAAACACTTGGCCTCGGTCTATGACAAGTTTGCCCCTAGCTACGATGGAGTTTGGCGT GCTGCCGGCCTGCGCAAGGTGCAGGAGTTGATGGTGCGTAAGTTTGATTTTGGCGGAACGGTGCTGGACCTGGCC TGTGGCACTGGGGCCGTTGGCCGCGTCTTGCACGAGGCGGGCATCGAGGCCGAAATCACGGGTATTGAAGTCTCA GAGGGCATGCTGCAGTCGTCGCCCGACATTCACCAGCACTATAAGCAGCCCATCATTGTAGGTCCCATGGAAGAG GAAATCATGGTGAGTCGAGTCGAGTCTCCAGACGCGTAGAGGCCGCCATTTGACATGTCCTTGTCCAGACTGCCG GCCCACACGACCATGTTGTCTGCTTTGGAGCCCTCCACTTTCTTCAGCCCGTCATGTTTAACGCTGTGCTGGCCA AGATGTTTATGCTGGCGCGGAAATCCGTCTCGTTTGACATTGACGACGTTCCCCCGTCCTACATTGATTTCCTCC GCGACAATCATGGTCAGCTATTCATCAACTACAACCACGTGGAAGAAATGGAGCAGTTTGGAGTGCCCAAGGCAT GGAAGCTTGTCCACAAGTCGCATGAATTTCTCTTTACCTCGCCCCATGCTGGCCACGACATCTTTGGTTATGCCT TGCGTTTTGAGCGGCTTTAG |