Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1846
Gene name
LocationContig_152:16333..18069
Strand-
Gene length (bp)1736
Transcript length (bp)1674
Coding sequence length (bp)1674
Protein length (aa) 558

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10329 DUF2417 Region of unknown function (DUF2417) 6.6E-85 62 289

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13912|YDW6_SCHPO Uncharacterized protein C23C11.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23C11.06c PE=4 SV=1 61 556 8.0E-90
sp|A6ZRW8|YNL5_YEAS7 Uncharacterized vacuolar membrane protein SCY_4679 OS=Saccharomyces cerevisiae (strain YJM789) GN=SCY_4679 PE=3 SV=1 106 554 9.0E-31
sp|P53925|YNL5_YEAST Uncharacterized vacuolar membrane protein YNL115C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL115C PE=1 SV=1 106 554 1.0E-30

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

Domain # Start End Length
1 98 120 22
2 135 154 19
3 161 183 22
4 188 207 19
5 236 258 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1846
MPLFSRSKDNPDDGRDGHDGRSSSPLSQQHQQQQQQQQQQQQHRQQRRHPADDADDYAPPDEHTRLLPNRVDSGR
AMLNPDDPAVSPYNLWSIRILRYLTLFFTAVTLAWWVVLLVTVFATPPGLHTRGSAFFPLSYASLALANMLFTLI
FFGVPSKAVRVLAIVLAFLLLLDVILILSVQQTRYEEGWVGTTSVVWTLLMSLWTLLTDRTVQWGKREEEERLTG
RAETRRTLTEWLAVLLSTIAYVVMAIAVLLMTLTIILRALDAGVGPPGKLYRVDGGKYRIHLYCHGNKTDRHGDE
LPTVLIEGGERPVEQHLWGFAQNAIGNGSISRYCFADRPGFAWSDTAPSPLSAGFAVDVLGEALAEAGEQGPWVL
LSAGVGSIYSRVFSSRHGHEVSGLLLIDPLHEDLLDEAIGRPGRGFLLWLRGVISPLGIDRLSGAIFRGRTSKDR
IYGRAAQQTGKFIFAKLQENLVANSFTKRDAQSSRQIQNKDTPLVLVSSGIEVQGSSEWADKQRDLSRLTEKLLS
WDIVNKAPHQVWLTQDGRDQIEKRLRQLVYAQ*
Coding >OphauB2|1846
ATGCCGCTCTTCTCCCGGAGCAAAGACAACCCCGACGATGGCCGTGATGGCCATGATGGTCGCAGCTCGTCGCCC
CTTTCCCAGCAACATCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCATCGACAACAGCGGCGGCATCCG
GCCGACGATGCTGACGACTATGCTCCCCCAGACGAACATACGCGCCTTCTTCCAAACCGCGTCGACTCGGGCCGT
GCTATGCTCAACCCCGATGATCCGGCCGTGTCGCCTTACAACCTCTGGAGCATCCGCATCCTGCGCTACTTGACT
CTCTTCTTCACCGCCGTCACGCTGGCCTGGTGGGTTGTGCTGCTTGTAACCGTCTTTGCCACACCGCCTGGCCTT
CACACTCGTGGCAGCGCTTTTTTCCCCCTCAGTTATGCGAGCCTGGCTCTTGCCAACATGCTCTTCACCCTCATA
TTCTTTGGCGTCCCATCCAAGGCAGTAAGAGTGCTAGCCATTGTGCTCGCTTTCTTGTTACTGCTCGACGTTATT
CTCATACTTAGCGTTCAGCAGACGCGCTATGAAGAGGGATGGGTCGGCACGACGAGCGTCGTCTGGACTCTGCTT
ATGAGCCTCTGGACTCTTCTTACTGATCGAACCGTCCAATGGGGCAAGCGCGAGGAGGAGGAAAGGCTGACAGGT
CGCGCCGAGACTAGACGAACACTGACGGAGTGGCTTGCCGTCCTGCTTTCAACCATTGCCTACGTCGTAATGGCC
ATTGCAGTGCTTCTCATGACACTCACTATAATATTACGTGCCCTTGATGCTGGTGTTGGGCCTCCCGGAAAGCTG
TATCGAGTCGATGGCGGAAAGTACCGCATTCACCTTTACTGCCACGGCAACAAGACTGACAGGCATGGTGATGAA
CTGCCAACTGTTCTCATTGAGGGTGGCGAGCGACCCGTAGAACAACACCTATGGGGATTTGCTCAAAACGCAATT
GGTAATGGCTCCATCTCACGCTACTGCTTCGCCGATCGCCCTGGGTTTGCTTGGTCAGATACAGCGCCCTCGCCG
CTCTCGGCTGGCTTCGCAGTCGACGTACTGGGCGAGGCGCTGGCAGAAGCGGGAGAGCAAGGACCATGGGTGCTG
CTCAGTGCTGGCGTCGGATCCATTTACTCTCGCGTATTCTCGTCGAGGCACGGGCACGAAGTGAGTGGACTGTTG
CTCATTGATCCTCTGCACGAAGATTTGCTCGATGAGGCAATTGGGAGGCCTGGGCGAGGCTTTTTGCTTTGGCTT
CGGGGCGTCATCTCGCCACTGGGTATAGACCGACTCTCCGGCGCCATCTTCCGCGGCCGCACTAGCAAGGACCGA
ATATATGGAAGAGCAGCGCAGCAGACAGGAAAATTCATCTTTGCCAAACTGCAAGAGAACCTCGTGGCCAATTCC
TTTACCAAACGCGACGCACAGAGTAGCCGGCAGATTCAGAACAAAGATACGCCCCTTGTCCTTGTCAGCTCTGGC
ATCGAGGTGCAAGGAAGCAGCGAATGGGCCGACAAGCAACGCGATCTATCTAGGCTGACTGAAAAGCTCTTGAGC
TGGGACATTGTTAACAAGGCACCGCATCAAGTATGGCTGACGCAGGACGGGAGAGACCAGATTGAGAAAAGGCTG
CGCCAGCTCGTTTACGCGCAATGA
Transcript >OphauB2|1846
ATGCCGCTCTTCTCCCGGAGCAAAGACAACCCCGACGATGGCCGTGATGGCCATGATGGTCGCAGCTCGTCGCCC
CTTTCCCAGCAACATCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCATCGACAACAGCGGCGGCATCCG
GCCGACGATGCTGACGACTATGCTCCCCCAGACGAACATACGCGCCTTCTTCCAAACCGCGTCGACTCGGGCCGT
GCTATGCTCAACCCCGATGATCCGGCCGTGTCGCCTTACAACCTCTGGAGCATCCGCATCCTGCGCTACTTGACT
CTCTTCTTCACCGCCGTCACGCTGGCCTGGTGGGTTGTGCTGCTTGTAACCGTCTTTGCCACACCGCCTGGCCTT
CACACTCGTGGCAGCGCTTTTTTCCCCCTCAGTTATGCGAGCCTGGCTCTTGCCAACATGCTCTTCACCCTCATA
TTCTTTGGCGTCCCATCCAAGGCAGTAAGAGTGCTAGCCATTGTGCTCGCTTTCTTGTTACTGCTCGACGTTATT
CTCATACTTAGCGTTCAGCAGACGCGCTATGAAGAGGGATGGGTCGGCACGACGAGCGTCGTCTGGACTCTGCTT
ATGAGCCTCTGGACTCTTCTTACTGATCGAACCGTCCAATGGGGCAAGCGCGAGGAGGAGGAAAGGCTGACAGGT
CGCGCCGAGACTAGACGAACACTGACGGAGTGGCTTGCCGTCCTGCTTTCAACCATTGCCTACGTCGTAATGGCC
ATTGCAGTGCTTCTCATGACACTCACTATAATATTACGTGCCCTTGATGCTGGTGTTGGGCCTCCCGGAAAGCTG
TATCGAGTCGATGGCGGAAAGTACCGCATTCACCTTTACTGCCACGGCAACAAGACTGACAGGCATGGTGATGAA
CTGCCAACTGTTCTCATTGAGGGTGGCGAGCGACCCGTAGAACAACACCTATGGGGATTTGCTCAAAACGCAATT
GGTAATGGCTCCATCTCACGCTACTGCTTCGCCGATCGCCCTGGGTTTGCTTGGTCAGATACAGCGCCCTCGCCG
CTCTCGGCTGGCTTCGCAGTCGACGTACTGGGCGAGGCGCTGGCAGAAGCGGGAGAGCAAGGACCATGGGTGCTG
CTCAGTGCTGGCGTCGGATCCATTTACTCTCGCGTATTCTCGTCGAGGCACGGGCACGAAGTGAGTGGACTGTTG
CTCATTGATCCTCTGCACGAAGATTTGCTCGATGAGGCAATTGGGAGGCCTGGGCGAGGCTTTTTGCTTTGGCTT
CGGGGCGTCATCTCGCCACTGGGTATAGACCGACTCTCCGGCGCCATCTTCCGCGGCCGCACTAGCAAGGACCGA
ATATATGGAAGAGCAGCGCAGCAGACAGGAAAATTCATCTTTGCCAAACTGCAAGAGAACCTCGTGGCCAATTCC
TTTACCAAACGCGACGCACAGAGTAGCCGGCAGATTCAGAACAAAGATACGCCCCTTGTCCTTGTCAGCTCTGGC
ATCGAGGTGCAAGGAAGCAGCGAATGGGCCGACAAGCAACGCGATCTATCTAGGCTGACTGAAAAGCTCTTGAGC
TGGGACATTGTTAACAAGGCACCGCATCAAGTATGGCTGACGCAGGACGGGAGAGACCAGATTGAGAAAAGGCTG
CGCCAGCTCGTTTACGCGCAATGA
Gene >OphauB2|1846
ATGCCGCTCTTCTCCCGGAGCAAAGACAACCCCGACGATGGCCGTGATGGCCATGATGGTCGCAGCTCGTCGCCC
CTTTCCCAGCAACATCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAACAGCATCGACAACAGCGGCGGCATCCG
GCCGACGATGCTGACGACTATGCTCCCCCAGACGAACATACGCGCCTTCTTCCAAACCGCGTCGACTCGGGCCGT
GCTATGCTCAACCCCGATGATCCGGCCGTGTCGCCTTACAACCTCTGGAGCATCCGCATCCTGCGCTACTTGACT
CTCTTCTTCACCGCCGTCACGCTGGCCTGGTGGGTTGTGCTGCTTGTAACCGTCTTTGCCACACCGCCTGGCCTT
CACACTCGTGGCAGCGCTTTTTTCCCCCTCAGTTATGCGAGCCTGGCTCTTGCCAACATGCTCTTCACCCTCATA
TTCTTTGGCGTCCCATCCAAGGCAGTAAGAGTGCTAGCCATTGTGCTCGCTGTAAGTCCAAAGACACGCCACGGA
AACCTGCCGTGACTCGGGGCTAACAGCTTGCTCAACAGTTCTTGTTACTGCTCGACGTTATTCTCATACTTAGCG
TTCAGCAGACGCGCTATGAAGAGGGATGGGTCGGCACGACGAGCGTCGTCTGGACTCTGCTTATGAGCCTCTGGA
CTCTTCTTACTGATCGAACCGTCCAATGGGGCAAGCGCGAGGAGGAGGAAAGGCTGACAGGTCGCGCCGAGACTA
GACGAACACTGACGGAGTGGCTTGCCGTCCTGCTTTCAACCATTGCCTACGTCGTAATGGCCATTGCAGTGCTTC
TCATGACACTCACTATAATATTACGTGCCCTTGATGCTGGTGTTGGGCCTCCCGGAAAGCTGTATCGAGTCGATG
GCGGAAAGTACCGCATTCACCTTTACTGCCACGGCAACAAGACTGACAGGCATGGTGATGAACTGCCAACTGTTC
TCATTGAGGGTGGCGAGCGACCCGTAGAACAACACCTATGGGGATTTGCTCAAAACGCAATTGGTAATGGCTCCA
TCTCACGCTACTGCTTCGCCGATCGCCCTGGGTTTGCTTGGTCAGATACAGCGCCCTCGCCGCTCTCGGCTGGCT
TCGCAGTCGACGTACTGGGCGAGGCGCTGGCAGAAGCGGGAGAGCAAGGACCATGGGTGCTGCTCAGTGCTGGCG
TCGGATCCATTTACTCTCGCGTATTCTCGTCGAGGCACGGGCACGAAGTGAGTGGACTGTTGCTCATTGATCCTC
TGCACGAAGATTTGCTCGATGAGGCAATTGGGAGGCCTGGGCGAGGCTTTTTGCTTTGGCTTCGGGGCGTCATCT
CGCCACTGGGTATAGACCGACTCTCCGGCGCCATCTTCCGCGGCCGCACTAGCAAGGACCGAATATATGGAAGAG
CAGCGCAGCAGACAGGAAAATTCATCTTTGCCAAACTGCAAGAGAACCTCGTGGCCAATTCCTTTACCAAACGCG
ACGCACAGAGTAGCCGGCAGATTCAGAACAAAGATACGCCCCTTGTCCTTGTCAGCTCTGGCATCGAGGTGCAAG
GAAGCAGCGAATGGGCCGACAAGCAACGCGATCTATCTAGGCTGACTGAAAAGCTCTTGAGCTGGGACATTGTTA
ACAAGGCACCGCATCAAGTATGGCTGACGCAGGACGGGAGAGACCAGATTGAGAAAAGGCTGCGCCAGCTCGTTT
ACGCGCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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