Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1839
Gene name
LocationContig_151:45894..47787
Strand+
Gene length (bp)1893
Transcript length (bp)1494
Coding sequence length (bp)1494
Protein length (aa) 498

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02535 Zip ZIP Zinc transporter 2.0E-12 164 264
PF02535 Zip ZIP Zinc transporter 4.6E-13 390 493

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 154 497 1.0E-26
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 106 497 2.0E-24
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 275 497 1.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 147 497 7.0E-21
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 165 497 2.0E-17
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Swissprot ID Swissprot Description Start End E-value
sp|O94639|ZRT1_SCHPO Zinc-regulated transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=zrt1 PE=1 SV=1 154 497 1.0E-26
sp|P32804|ZRT1_YEAST Zinc-regulated transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT1 PE=1 SV=1 106 497 2.0E-24
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 275 497 1.0E-22
sp|Q9SLG3|ZIP3_ARATH Zinc transporter 3 OS=Arabidopsis thaliana GN=ZIP3 PE=2 SV=1 147 497 7.0E-21
sp|Q8S3W4|ZIP8_ARATH Probable zinc transporter 8 OS=Arabidopsis thaliana GN=ZIP8 PE=2 SV=1 165 497 2.0E-17
sp|Q38856|IRT1_ARATH Fe(2+) transport protein 1 OS=Arabidopsis thaliana GN=IRT1 PE=1 SV=2 153 497 1.0E-16
sp|O81850|IRT2_ARATH Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1 165 497 2.0E-16
sp|O23039|ZIP5_ARATH Zinc transporter 5 OS=Arabidopsis thaliana GN=ZIP5 PE=2 SV=1 135 497 3.0E-14
sp|Q6L8G0|ZIP5_ORYSJ Zinc transporter 5 OS=Oryza sativa subsp. japonica GN=ZIP5 PE=2 SV=1 165 497 8.0E-13
sp|A3BI11|ZIP8_ORYSJ Zinc transporter 8 OS=Oryza sativa subsp. japonica GN=ZIP8 PE=2 SV=1 268 497 2.0E-11
sp|Q9FIS2|ZIP12_ARATH Probable zinc transporter 12 OS=Arabidopsis thaliana GN=ZIP12 PE=3 SV=1 150 497 3.0E-11
sp|Q6L8G1|IRT2_ORYSJ Fe(2+) transport protein 2 OS=Oryza sativa subsp. japonica GN=IRT2 PE=2 SV=1 172 497 6.0E-11
sp|Q75HB1|IRT1_ORYSJ Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1 142 497 1.0E-10
sp|Q12436|ZRT2_YEAST Zinc-regulated transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZRT2 PE=1 SV=1 161 266 1.0E-09
sp|O82643|ZIP9_ARATH Zinc transporter 9 OS=Arabidopsis thaliana GN=ZIP9 PE=2 SV=1 286 497 2.0E-09
sp|Q8W245|ZIP10_ARATH Probable zinc transporter 10 OS=Arabidopsis thaliana GN=ZIP10 PE=1 SV=2 396 497 4.0E-09
sp|O04089|ZIP4_ARATH Zinc transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ZIP4 PE=2 SV=1 395 497 3.0E-08
sp|Q0DHE3|ZIP9_ORYSJ Zinc transporter 9 OS=Oryza sativa subsp. japonica GN=ZIP9 PE=3 SV=3 394 497 6.0E-08
sp|Q8LE59|IRT3_ARATH Fe(2+) transport protein 3, chloroplastic OS=Arabidopsis thaliana GN=IRT3 PE=2 SV=3 395 497 1.0E-07
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GO

GO Term Description Terminal node
GO:0046873 metal ion transmembrane transporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016020 membrane Yes
GO:0030001 metal ion transport Yes
GO:0051179 localization No
GO:0006811 ion transport No
GO:0008324 cation transmembrane transporter activity No
GO:0005575 cellular_component No
GO:0006812 cation transport No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0015075 ion transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0110165 cellular anatomical entity No
GO:0006810 transport No
GO:0022857 transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0009987 cellular process No
GO:0051234 establishment of localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 169 191 22
2 198 220 22
3 235 257 22
4 301 323 22
5 400 422 22
6 429 451 22
7 471 493 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1839
MHPNVVKALVLFHSAVAAATVDLLPRQTAPPSATSAADVSAITDCHLHGSQLFCMAGDTEYRVRTTSTPTTDIPA
QFTGCHTHGPEMFCIGPDGEEVQVEPATDETPGEHGHDHHHEHENDSPSDDSHRHCHFHAGVEHCVGGGKEQEAH
QPQCGATRREYNVGLRVGLLFAIMASSALGVFGPIVLHRVLPQKLNLAFIILKQFGTGIILSTAFVHLYTHANLM
LTHKCLGEMGYEAITSAIVLAGLFLSFIVEYIGHRIVTAKMKSSALLTAEESSNVLLSSEVVSILVMEAGILFHS
LLIGLTLVVAGDSFFITLFIVILFHQVFEGIALGTRIATVGTTLPESSPAVCHYEGDGSAHVHPADKSVGNLPTS
EESAPSCSSATGPSSGLSIKKKLSLASLFAFVTPLGMAIGIGVLHKFNGNDRSTLLAIGTLDALSAGILIWVGVV
EMWAADWMVGGHGHKAELSDANFPTVCLGAFGLVAGMALMSFLGKWA*
Coding >OphauB2|1839
ATGCATCCCAACGTGGTCAAAGCCTTGGTGCTATTTCACAGCGCCGTTGCTGCTGCTACCGTCGACCTACTGCCA
CGACAGACGGCGCCTCCATCCGCCACCAGCGCTGCAGACGTTTCCGCCATCACCGACTGTCATCTGCATGGCTCG
CAACTCTTCTGTATGGCCGGTGATACCGAGTATCGGGTTCGAACAACCTCCACTCCGACGACAGACATTCCCGCC
CAATTTACAGGCTGCCACACCCATGGCCCTGAAATGTTCTGCATTGGCCCTGATGGCGAAGAAGTGCAAGTAGAG
CCGGCAACCGACGAAACCCCCGGTGAACATGGCCACGATCATCATCATGAGCATGAGAATGACAGCCCCTCTGAT
GACAGCCACCGCCATTGCCATTTCCACGCGGGCGTAGAACACTGCGTTGGCGGCGGCAAAGAACAAGAGGCCCAC
CAACCCCAGTGTGGCGCAACTAGGCGCGAGTACAATGTCGGCCTACGCGTTGGCCTTCTCTTCGCCATAATGGCA
TCTAGCGCTCTTGGTGTTTTTGGTCCCATTGTACTTCACCGGGTCCTGCCCCAAAAGCTCAACTTGGCCTTTATC
ATTCTCAAGCAGTTTGGCACTGGAATCATCCTGTCTACTGCTTTTGTTCACTTATACACTCATGCCAACTTGATG
CTCACCCACAAATGTCTTGGCGAAATGGGCTACGAGGCAATCACGTCGGCTATTGTCTTGGCTGGCCTATTTCTC
TCCTTTATCGTGGAATACATTGGCCACCGTATTGTCACGGCCAAGATGAAATCCTCTGCCCTTCTCACCGCCGAG
GAAAGCTCCAATGTCCTCTTATCTTCTGAAGTCGTCAGCATTCTCGTCATGGAGGCGGGAATTCTTTTCCACTCG
TTGCTCATTGGCTTGACTCTTGTCGTTGCAGGCGATTCTTTTTTCATCACTCTCTTCATCGTCATACTGTTTCAT
CAAGTTTTCGAAGGAATCGCCCTCGGAACACGTATAGCCACTGTGGGCACCACCTTGCCTGAATCGTCTCCGGCA
GTATGCCATTATGAAGGTGATGGCTCAGCCCATGTTCATCCTGCCGACAAGTCAGTGGGCAATTTGCCCACGTCA
GAAGAGTCAGCACCTTCTTGCTCATCTGCTACGGGGCCGTCCTCTGGCCTCTCAATCAAGAAGAAGCTCAGCCTT
GCCTCGCTATTTGCGTTTGTCACTCCTCTTGGAATGGCCATTGGAATCGGCGTTCTGCACAAGTTCAACGGCAAT
GATAGATCAACTCTTCTCGCCATTGGCACACTTGACGCCCTCTCAGCCGGTATACTCATCTGGGTGGGTGTCGTC
GAGATGTGGGCTGCCGATTGGATGGTTGGCGGCCATGGCCACAAGGCTGAGCTCTCCGATGCTAATTTTCCAACT
GTCTGCCTCGGTGCTTTTGGCCTCGTTGCAGGCATGGCGCTCATGAGCTTTCTTGGCAAGTGGGCATAA
Transcript >OphauB2|1839
ATGCATCCCAACGTGGTCAAAGCCTTGGTGCTATTTCACAGCGCCGTTGCTGCTGCTACCGTCGACCTACTGCCA
CGACAGACGGCGCCTCCATCCGCCACCAGCGCTGCAGACGTTTCCGCCATCACCGACTGTCATCTGCATGGCTCG
CAACTCTTCTGTATGGCCGGTGATACCGAGTATCGGGTTCGAACAACCTCCACTCCGACGACAGACATTCCCGCC
CAATTTACAGGCTGCCACACCCATGGCCCTGAAATGTTCTGCATTGGCCCTGATGGCGAAGAAGTGCAAGTAGAG
CCGGCAACCGACGAAACCCCCGGTGAACATGGCCACGATCATCATCATGAGCATGAGAATGACAGCCCCTCTGAT
GACAGCCACCGCCATTGCCATTTCCACGCGGGCGTAGAACACTGCGTTGGCGGCGGCAAAGAACAAGAGGCCCAC
CAACCCCAGTGTGGCGCAACTAGGCGCGAGTACAATGTCGGCCTACGCGTTGGCCTTCTCTTCGCCATAATGGCA
TCTAGCGCTCTTGGTGTTTTTGGTCCCATTGTACTTCACCGGGTCCTGCCCCAAAAGCTCAACTTGGCCTTTATC
ATTCTCAAGCAGTTTGGCACTGGAATCATCCTGTCTACTGCTTTTGTTCACTTATACACTCATGCCAACTTGATG
CTCACCCACAAATGTCTTGGCGAAATGGGCTACGAGGCAATCACGTCGGCTATTGTCTTGGCTGGCCTATTTCTC
TCCTTTATCGTGGAATACATTGGCCACCGTATTGTCACGGCCAAGATGAAATCCTCTGCCCTTCTCACCGCCGAG
GAAAGCTCCAATGTCCTCTTATCTTCTGAAGTCGTCAGCATTCTCGTCATGGAGGCGGGAATTCTTTTCCACTCG
TTGCTCATTGGCTTGACTCTTGTCGTTGCAGGCGATTCTTTTTTCATCACTCTCTTCATCGTCATACTGTTTCAT
CAAGTTTTCGAAGGAATCGCCCTCGGAACACGTATAGCCACTGTGGGCACCACCTTGCCTGAATCGTCTCCGGCA
GTATGCCATTATGAAGGTGATGGCTCAGCCCATGTTCATCCTGCCGACAAGTCAGTGGGCAATTTGCCCACGTCA
GAAGAGTCAGCACCTTCTTGCTCATCTGCTACGGGGCCGTCCTCTGGCCTCTCAATCAAGAAGAAGCTCAGCCTT
GCCTCGCTATTTGCGTTTGTCACTCCTCTTGGAATGGCCATTGGAATCGGCGTTCTGCACAAGTTCAACGGCAAT
GATAGATCAACTCTTCTCGCCATTGGCACACTTGACGCCCTCTCAGCCGGTATACTCATCTGGGTGGGTGTCGTC
GAGATGTGGGCTGCCGATTGGATGGTTGGCGGCCATGGCCACAAGGCTGAGCTCTCCGATGCTAATTTTCCAACT
GTCTGCCTCGGTGCTTTTGGCCTCGTTGCAGGCATGGCGCTCATGAGCTTTCTTGGCAAGTGGGCATAA
Gene >OphauB2|1839
ATGCATCCCAACGTGGTCAAAGCCTTGGTGCTATTTCACAGCGCCGTTGCTGCTGCTACCGTCGACCTACTGCCA
CGACAGACGGCGCCTCCATCCGCCACCAGCGCTGCAGACGTTTCCGCCATCACCGACTGTCATCTGCATGGCTCG
CAACTGTCAGTCCAACATACAACGCCTGCCTTCTCGTCTACATAGACTGACTGTGAACCTGTAACAGCTTCTGTA
TGGCCGGTGATACCGAGTATCGGGTTCGAACAACCTCCACTCCGACGACAGACATTCCCGCCCAATTTACAGGCT
GCCACACCCATGGCCCTGAAATGTAAGCTCTGGCTTGGAACTAGCCTCCCGGCTCTTTACTCTGACCCTGTTCCC
CATCTAGGTTCTGCATTGGCCCTGATGGCGAAGAAGTGCAAGTAGAGCCGGCAACCGACGAAACCCCCGGTGAAC
ATGGCCACGATCATCATCATGAGCATGAGAATGACAGCCCCTCTGATGACAGCCACCGCCATTGCCATTTCCACG
CGGGCGTAGAGTAAGACCCTTGTCCCCATTGCTTCCGACACATCCATGCCATTATTTGAAGTGTTCAAAACTCAT
TGAGGCCCAATAGACACTGCGTTGGCGGCGGCAAAGAACAAGAGGCCCACCAACCCCAGTGTGGCGCAACTAGGC
GCGAGTACAATGTCGGCCTACGCGTTGGCCTTCTCTTCGCCATAATGGCATCTAGCGCTCTTGGTAATTGTCTAT
CCATTCTTAGTATGCCCTGAGTATGCACTCACATGTCTCACCTTGACAGGTGTTTTTGGTCCCATTGTACTTCAC
CGGGTCCTGCCCCAAAAGCTCAACTTGGCCTTTATCATTCTCAAGCAGTTTGGCACTGGAATCATCCTGTCTACT
GCTTTTGTTCACGTAGGCCTTTGATGAATTGGAACACGGAAAAGCCTTCGTTTGATTTCACTGACGCCTTGCTTA
GTTATACACTCATGCCAACTTGATGCTCACCCACAAATGTCTTGGCGAAATGGGCTACGAGGCAATCACGTCGGC
TATTGTCTTGGCTGGCCTATTTCTCTCCTTTATCGTGGAATACATTGGCCACCGTATTGTCACGGCCAAGATGAA
ATCCTCTGCCCTTCTCACCGCCGAGGAAAGCTCCAATGTCCTCTTATCTTCTGAAGTCGTCAGCATTCTCGTCAT
GGAGGCGGGAATTCTTTTCCACTCGTTGCGTAAGCATTGCTATGGCTTAATCCCTCTTTTCCCTCCAAGGGGACC
AAGCCTCGACTGACATGGCGTCTTCTAGTCATTGGCTTGACTCTTGTCGTTGCAGGCGATTCTTTTTTCATCACT
CTCTTCATCGTCATACTGTTTCATCAAGTTTTCGAAGGAATCGCCCTCGGAACACGTATAGCCACTGTGGGCACC
ACCTTGCCTGAATCGTCTCCGGCAGTATGCCATTATGAAGGTGATGGCTCAGCCCATGTTCATCCTGCCGACAAG
TCAGTGGGCAATTTGCCCACGTCAGAAGAGTCAGCACCTTCTTGCTCATCTGCTACGGGGCCGTCCTCTGGCCTC
TCAATCAAGAAGAAGCTCAGCCTTGCCTCGCTATTTGCGTTTGTCACTCCTCTTGGAATGGCCATTGGAATCGGC
GTTCTGCACAAGTTCAACGGCAATGATAGATCAACTCTTCTCGCCATTGGCACACTTGACGCCCTCTCAGCCGGT
ATACTCATCTGGGTGGGTGTCGTCGAGATGTGGGCTGCCGATTGGATGGTTGGCGGCCATGGCCACAAGGCTGAG
CTCTCCGATGCTAATTTTCCAACTGTCTGCCTCGGTGCTTTTGGCCTCGTTGCAGGCATGGCGCTCATGAGCTTT
CTTGGCAAGTGGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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