Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1817
Gene name
LocationContig_150:44019..45087
Strand+
Gene length (bp)1068
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04502 Saf4_Yju2 Saf4/Yju2 protein 4.2E-52 8 320

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O60141|CWC16_SCHPO Protein saf4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=saf4 PE=3 SV=2 1 213 2.0E-37
sp|Q5EA37|CC130_BOVIN Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1 6 244 4.0E-33
sp|Q7K0F0|CC130_DROME Coiled-coil domain-containing protein 130 homolog OS=Drosophila melanogaster GN=CG15084 PE=2 SV=1 7 231 2.0E-32
sp|P13994|CC130_HUMAN Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2 6 215 4.0E-32
sp|Q9D516|CC130_MOUSE Coiled-coil domain-containing protein 130 OS=Mus musculus GN=Ccdc130 PE=2 SV=1 7 213 9.0E-32
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Swissprot ID Swissprot Description Start End E-value
sp|O60141|CWC16_SCHPO Protein saf4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=saf4 PE=3 SV=2 1 213 2.0E-37
sp|Q5EA37|CC130_BOVIN Coiled-coil domain-containing protein 130 OS=Bos taurus GN=CCDC130 PE=2 SV=1 6 244 4.0E-33
sp|Q7K0F0|CC130_DROME Coiled-coil domain-containing protein 130 homolog OS=Drosophila melanogaster GN=CG15084 PE=2 SV=1 7 231 2.0E-32
sp|P13994|CC130_HUMAN Coiled-coil domain-containing protein 130 OS=Homo sapiens GN=CCDC130 PE=1 SV=2 6 215 4.0E-32
sp|Q9D516|CC130_MOUSE Coiled-coil domain-containing protein 130 OS=Mus musculus GN=Ccdc130 PE=2 SV=1 7 213 9.0E-32
sp|Q32PZ9|CC130_RAT Coiled-coil domain-containing protein 130 OS=Rattus norvegicus GN=Ccdc130 PE=2 SV=1 7 213 2.0E-31
sp|Q6DJK9|CC130_XENLA Coiled-coil domain-containing protein 130 OS=Xenopus laevis GN=ccdc130 PE=2 SV=1 7 231 1.0E-30
sp|Q66I85|CC130_DANRE Coiled-coil domain-containing protein 130 homolog OS=Danio rerio GN=ccdc130 PE=2 SV=1 6 244 4.0E-28
sp|Q54TR4|CC130_DICDI Coiled-coil domain-containing protein 130 homolog OS=Dictyostelium discoideum GN=DDB_G0281599 PE=3 SV=1 7 108 7.0E-21
sp|Q09651|CC130_CAEEL Coiled-coil domain-containing protein 130 homolog OS=Caenorhabditis elegans GN=ZK1307.9 PE=1 SV=1 9 213 4.0E-19
sp|Q9P7C5|CWF16_SCHPO Pre-mRNA-splicing factor cwf16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf16 PE=1 SV=2 6 107 6.0E-13
sp|Q54WR5|CCD94_DICDI Coiled-coil domain-containing protein 94 homolog OS=Dictyostelium discoideum GN=ccdc94 PE=3 SV=1 6 259 1.0E-12
sp|Q9D6J3|CCD94_MOUSE Coiled-coil domain-containing protein 94 OS=Mus musculus GN=Ccdc94 PE=1 SV=1 6 107 4.0E-11
sp|Q9BW85|CCD94_HUMAN Coiled-coil domain-containing protein 94 OS=Homo sapiens GN=CCDC94 PE=1 SV=1 6 107 1.0E-10
sp|P28320|CWC16_YEAST Protein CWC16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJU2 PE=1 SV=1 6 107 2.0E-07
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GO

GO Term Description Terminal node
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0090304 nucleic acid metabolic process No
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0043170 macromolecule metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0008150 biological_process No
GO:0006396 RNA processing No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0006807 nitrogen compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0006397 mRNA processing No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0008380 RNA splicing No
GO:0044238 primary metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0016071 mRNA metabolic process No
GO:0016070 RNA metabolic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6821
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6013
Ophiocordyceps australis map64 (Brazil) OphauB2|1817 (this protein)
Ophiocordyceps camponoti-floridani Ophcf2|01495
Ophiocordyceps kimflemingae Ophio5|3561

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1817
MQGFNMGRYHPPDPDATPSSRRRGSSKALQTPTVRFEMPFAIWCSSCSQPTLIGQGVRFNARKKRVGAYFSTPVY
RFSMRHGECGGEIEIETEPAKTDYVVVAGGRRRDYGGSDEASPCPEVDKQSAFSTLERTIAHRSALAASNSRIQA
LAAAQDATWSDPYAHNQRLRAALRPARRLRLMQQRRDAQMAQFAPQLVLLPPSEEDARQAALVDFGAAPRRLEEE
EEEQEEDEGVARQVWPDAPLAKPLFQRSARLAANSSPHASCLASAIASRTRLAHDPFVQSATARFAPVKKPRRQP
PHPDAATPKTEPSSLLVQYDSD*
Coding >OphauB2|1817
ATGCAAGGCTTCAACATGGGCCGCTACCACCCCCCCGACCCGGACGCTACTCCCTCGTCTCGCCGCCGCGGCAGC
AGCAAAGCCCTGCAAACGCCCACGGTGCGCTTTGAAATGCCCTTTGCCATTTGGTGCAGCAGCTGTAGCCAGCCC
ACCCTTATTGGACAGGGCGTGCGCTTCAATGCCCGCAAGAAGCGCGTGGGCGCATATTTTTCGACGCCCGTGTAT
AGGTTTAGCATGAGGCATGGAGAGTGTGGTGGCGAGATTGAGATTGAGACGGAGCCGGCCAAGACGGATTATGTG
GTTGTGGCTGGGGGGCGGCGGAGGGATTATGGGGGAAGTGATGAAGCGTCCCCTTGTCCCGAGGTGGACAAACAA
TCCGCCTTTTCCACCCTTGAGCGCACCATTGCCCACCGCTCCGCCCTGGCCGCTTCAAACTCGCGCATCCAGGCC
CTGGCCGCCGCCCAAGACGCCACCTGGTCCGACCCCTATGCGCACAACCAGCGTCTTCGTGCTGCGCTACGGCCG
GCTCGTCGTTTACGTTTGATGCAGCAGCGGCGCGATGCGCAAATGGCGCAGTTTGCGCCGCAGCTTGTCTTGCTG
CCGCCGAGCGAGGAGGATGCGCGGCAGGCGGCGCTGGTCGACTTTGGCGCTGCGCCGCGGCGGCTTGAGGAGGAG
GAGGAGGAGCAGGAAGAGGACGAGGGCGTGGCTCGACAGGTTTGGCCAGATGCGCCGCTTGCCAAGCCCCTTTTT
CAAAGGTCTGCTCGACTGGCGGCTAATTCTTCGCCACATGCCTCTTGTCTTGCCTCGGCTATTGCTTCTAGGACG
CGTCTTGCTCATGACCCCTTTGTTCAGTCGGCCACTGCCCGCTTTGCGCCAGTCAAGAAGCCGCGCCGCCAGCCC
CCTCACCCCGACGCTGCAACGCCCAAAACTGAGCCGTCGTCTCTGCTCGTGCAGTACGACTCTGATTAG
Transcript >OphauB2|1817
ATGCAAGGCTTCAACATGGGCCGCTACCACCCCCCCGACCCGGACGCTACTCCCTCGTCTCGCCGCCGCGGCAGC
AGCAAAGCCCTGCAAACGCCCACGGTGCGCTTTGAAATGCCCTTTGCCATTTGGTGCAGCAGCTGTAGCCAGCCC
ACCCTTATTGGACAGGGCGTGCGCTTCAATGCCCGCAAGAAGCGCGTGGGCGCATATTTTTCGACGCCCGTGTAT
AGGTTTAGCATGAGGCATGGAGAGTGTGGTGGCGAGATTGAGATTGAGACGGAGCCGGCCAAGACGGATTATGTG
GTTGTGGCTGGGGGGCGGCGGAGGGATTATGGGGGAAGTGATGAAGCGTCCCCTTGTCCCGAGGTGGACAAACAA
TCCGCCTTTTCCACCCTTGAGCGCACCATTGCCCACCGCTCCGCCCTGGCCGCTTCAAACTCGCGCATCCAGGCC
CTGGCCGCCGCCCAAGACGCCACCTGGTCCGACCCCTATGCGCACAACCAGCGTCTTCGTGCTGCGCTACGGCCG
GCTCGTCGTTTACGTTTGATGCAGCAGCGGCGCGATGCGCAAATGGCGCAGTTTGCGCCGCAGCTTGTCTTGCTG
CCGCCGAGCGAGGAGGATGCGCGGCAGGCGGCGCTGGTCGACTTTGGCGCTGCGCCGCGGCGGCTTGAGGAGGAG
GAGGAGGAGCAGGAAGAGGACGAGGGCGTGGCTCGACAGGTTTGGCCAGATGCGCCGCTTGCCAAGCCCCTTTTT
CAAAGGTCTGCTCGACTGGCGGCTAATTCTTCGCCACATGCCTCTTGTCTTGCCTCGGCTATTGCTTCTAGGACG
CGTCTTGCTCATGACCCCTTTGTTCAGTCGGCCACTGCCCGCTTTGCGCCAGTCAAGAAGCCGCGCCGCCAGCCC
CCTCACCCCGACGCTGCAACGCCCAAAACTGAGCCGTCGTCTCTGCTCGTGCAGTACGACTCTGATTAG
Gene >OphauB2|1817
ATGCAAGGCTTCAACATGGGCCGCTACCACCCCCCCGACCCGGACGCTACTCCCTCGTCTCGCCGCCGCGGCAGC
AGCAAAGCCCTGCAAACGCCCACGGTGCGCTTTGAAATGCCCTTTGCCATTTGGTGCAGCAGCTGTAGCCAGCCC
ACCCTTATTGGACAGGGCGTGCGCTTCAATGCCCGCAAGAAGCGCGTGGGCGCATATTTTTCGACGCCCGTGTAT
AGGTTTAGCATGAGGCATGGAGAGTGTGGTGGCGAGATTGAGATTGAGACGGAGCCGGCCAAGACGGATTATGTG
GTTGTGGCTGGGGGGCGGCGGAGGGATTATGGGGGAAGTGGTGAGTTTTTTTTTTTTTTTTGACTGTGCTTGTTG
GCTTGGCTTCATGGGAGAGAGAGAGAGGCTTTTTGCTAATGATTTTTTATTTTTTTTTCAACAGATGAAGCGTCC
CCTTGTCCCGAGGTGGACAAACAATCCGCCTTTTCCACCCTTGAGCGCACCATTGCCCACCGCTCCGCCCTGGCC
GCTTCAAACTCGCGCATCCAGGCCCTGGCCGCCGCCCAAGACGCCACCTGGTCCGACCCCTATGCGCACAACCAG
CGTCTTCGTGCTGCGCTACGGCCGGCTCGTCGTTTACGTTTGATGCAGCAGCGGCGCGATGCGCAAATGGCGCAG
TTTGCGCCGCAGCTTGTCTTGCTGCCGCCGAGCGAGGAGGATGCGCGGCAGGCGGCGCTGGTCGACTTTGGCGCT
GCGCCGCGGCGGCTTGAGGAGGAGGAGGAGGAGCAGGAAGAGGACGAGGGCGTGGCTCGACAGGTTTGGCCAGAT
GCGCCGCTTGCCAAGCCCCTTTTTCAAAGGTCTGCTCGACTGGCGGCTAATTCTTCGCCACATGCCTCTTGTCTT
GCCTCGGCTATTGCTTCTAGGACGCGTCTTGCTCATGACCCCTTTGTTCAGTCGGCCACTGCCCGCTTTGCGCCA
GTCAAGAAGCCGCGCCGCCAGCCCCCTCACCCCGACGCTGCAACGCCCAAAACTGAGCCGTCGTCTCTGCTCGTG
CAGTACGACTCTGATTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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