Protein ID | OphauB2|173 |
Gene name | |
Location | Contig_10:21678..24030 |
Strand | - |
Gene length (bp) | 2352 |
Transcript length (bp) | 2352 |
Coding sequence length (bp) | 2352 |
Protein length (aa) | 784 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12708 | Pectate_lyase_3 | Pectate lyase superfamily protein | 2.7E-84 | 67 | 291 |
PF12708 | Pectate_lyase_3 | Pectate lyase superfamily protein | 2.2E-09 | 417 | 474 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P49426|EXG1_COCCA | Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum GN=EXG1 PE=1 SV=1 | 45 | 781 | 0.0E+00 |
sp|D4B0V1|E13B_ARTBC | Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02077 PE=1 SV=1 | 383 | 781 | 1.0E-158 |
sp|D4B0V1|E13B_ARTBC | Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02077 PE=1 SV=1 | 24 | 392 | 7.0E-136 |
sp|P53626|E13B_TRIHA | Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum GN=bgn13.1 PE=1 SV=1 | 80 | 758 | 5.0E-71 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 24 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|173 MGLSTVLAASILALRLFSLPVAASPALSAPAAQDNGVSPNTAGTWWMSQVKRQGTVAYANVGGYKVFRNVKDFGA KGDGSSDDTAAINAAITEGNRCGDNCDSSTVTPALVYFPPGQYAVSKPIVAYYYTQLVGDAVNVPTIKAMPGFKG IAVIDSNPYKDGGENWFTNQNNFFRQIRNFKIDLTGLPKSTGTGLHWQVAQATSLQNIEFNMIKDQSEDNKQQGI FMENGSGGFMTDLTFNGGGLGAFFGNQQFTTRNLKFNGCRTGIQMQWNWLWTFHDMSIQGCKLGINMTQAEGAAQ TVGSIIMLDSTIANTEVGVATIYNPQQTGTNGTLVLDNVDMSSNVPVAVQNGANRQTILNGNARIGSWVQGRSYQ GASGSAGQGPRPTIAKPAALMEKGKFFARSKPQYNNVPASKFVSVKSKGAKGDGRSDDTEVIQSIFDSIGPDEIV YFDHGAYVVTDTIRVPKNVRVVGEIWPLIMAGGNDNFKDENNPKPVFQVGQSGDVGNVEMQDLMFETLGPQPGAI LMEFNVAGQSKGSAGLWDVHFRVGGSAGTQLQSDRCAKTPNSRTEPNPQCMGAFMLLHITPSASPYLENTWFWVA DHELDLPDHSQINIFNGRGVLIESTKGAWLWGTSSEHSVLSNYQLNKAQNVLMASIQSETAYFQGNPDARVPYRT NTAFADPDFSQCKGPKCARTWGLRINDSKDVFVYGGGLYSFFDNYTQQCVNSNDCQDNMINIDNSHVEMFGISTK ASISMVTLNGKTAAIDSDNRNMFCAAIAVFEAS* |
Coding | >OphauB2|173 ATGGGGCTGTCGACTGTTCTCGCAGCCTCCATCCTGGCTTTGCGCCTCTTTTCTCTACCGGTAGCTGCGTCGCCC GCCTTGTCAGCACCAGCCGCTCAAGACAATGGCGTGAGCCCAAACACTGCTGGAACTTGGTGGATGTCCCAGGTT AAGCGACAAGGCACCGTTGCCTATGCCAATGTGGGCGGCTACAAGGTCTTTCGCAACGTCAAGGACTTTGGCGCC AAGGGTGACGGCTCCAGCGACGATACAGCTGCCATTAATGCCGCCATTACGGAAGGAAACCGTTGCGGCGACAAT TGCGACTCGAGTACCGTGACGCCTGCTCTCGTTTACTTTCCACCCGGCCAATATGCTGTTTCGAAGCCCATTGTC GCTTATTACTATACGCAGCTGGTTGGCGATGCTGTCAATGTTCCCACCATTAAAGCCATGCCTGGCTTCAAGGGC ATTGCTGTCATTGACTCGAACCCTTACAAGGATGGTGGAGAAAACTGGTTTACCAACCAAAACAACTTTTTCCGT CAGATTCGCAACTTCAAGATCGATCTCACCGGCCTGCCCAAGTCTACTGGCACCGGTCTCCATTGGCAGGTTGCT CAAGCCACATCGCTGCAGAATATCGAGTTCAACATGATTAAGGATCAGAGCGAGGATAATAAGCAGCAAGGCATC TTCATGGAAAACGGCTCTGGTGGCTTCATGACAGACTTGACCTTCAATGGCGGCGGTCTCGGCGCCTTTTTTGGT AACCAGCAATTCACTACCCGCAACCTCAAGTTTAATGGCTGCCGCACTGGAATTCAGATGCAGTGGAATTGGCTC TGGACCTTTCACGACATGTCTATTCAAGGCTGCAAACTCGGCATCAACATGACGCAGGCTGAGGGCGCAGCTCAG ACTGTCGGTTCCATCATCATGCTGGACAGCACCATTGCCAATACAGAAGTGGGTGTTGCCACTATTTATAACCCA CAGCAGACTGGAACCAATGGCACCTTGGTCCTTGACAATGTCGACATGTCCTCCAATGTTCCTGTTGCCGTTCAG AATGGTGCCAATAGGCAGACGATTCTCAACGGCAACGCGCGCATTGGCTCATGGGTTCAAGGCCGCTCTTACCAA GGTGCTTCGGGCTCGGCTGGCCAGGGACCCAGGCCGACGATTGCTAAGCCTGCTGCCCTGATGGAAAAGGGCAAA TTCTTTGCTCGCAGCAAGCCTCAGTATAACAATGTGCCTGCTTCCAAGTTTGTTTCGGTCAAGTCCAAGGGCGCC AAGGGTGACGGCAGAAGTGACGACACTGAAGTCATTCAGTCCATTTTTGACAGCATCGGCCCCGACGAGATTGTC TACTTTGATCACGGCGCCTATGTTGTTACCGATACTATTCGGGTTCCCAAGAATGTTCGAGTTGTTGGTGAAATC TGGCCACTAATCATGGCGGGAGGCAACGACAACTTCAAGGACGAAAACAACCCCAAGCCCGTCTTCCAGGTGGGC CAAAGTGGCGATGTCGGTAATGTTGAAATGCAGGATCTCATGTTTGAGACGCTGGGCCCGCAGCCTGGTGCGATT CTTATGGAATTCAACGTTGCTGGCCAGTCCAAGGGCTCTGCCGGCCTGTGGGATGTCCACTTTCGTGTCGGCGGC TCGGCCGGCACCCAGTTGCAGTCTGACAGGTGTGCTAAGACGCCCAACTCTCGGACTGAACCCAACCCCCAGTGC ATGGGTGCGTTTATGCTGCTGCATATCACGCCTTCTGCTAGCCCATATCTGGAAAACACTTGGTTCTGGGTTGCC GACCACGAGCTTGACCTTCCTGATCACAGCCAAATCAATATTTTTAATGGCCGTGGTGTCTTGATTGAGAGCACA AAGGGCGCCTGGCTTTGGGGCACGTCGTCTGAGCATAGCGTCTTGTCCAACTACCAGCTCAACAAGGCCCAGAAT GTGCTCATGGCATCGATTCAATCTGAAACGGCCTATTTCCAGGGCAATCCTGATGCTCGTGTGCCCTATAGGACA AACACTGCATTTGCGGATCCCGATTTCTCGCAGTGCAAGGGGCCCAAGTGTGCGCGTACCTGGGGCTTGCGCATC AATGATTCCAAGGATGTCTTTGTCTATGGAGGCGGTCTTTACAGCTTTTTTGATAATTACACGCAGCAGTGCGTC AATTCCAATGATTGCCAGGACAACATGATCAACATTGATAACTCGCATGTCGAAATGTTTGGCATCAGCACCAAG GCCAGCATTTCCATGGTGACACTTAATGGCAAGACGGCCGCGATTGACTCGGACAACCGCAACATGTTCTGCGCC GCCATTGCAGTTTTCGAGGCGTCTTAG |
Transcript | >OphauB2|173 ATGGGGCTGTCGACTGTTCTCGCAGCCTCCATCCTGGCTTTGCGCCTCTTTTCTCTACCGGTAGCTGCGTCGCCC GCCTTGTCAGCACCAGCCGCTCAAGACAATGGCGTGAGCCCAAACACTGCTGGAACTTGGTGGATGTCCCAGGTT AAGCGACAAGGCACCGTTGCCTATGCCAATGTGGGCGGCTACAAGGTCTTTCGCAACGTCAAGGACTTTGGCGCC AAGGGTGACGGCTCCAGCGACGATACAGCTGCCATTAATGCCGCCATTACGGAAGGAAACCGTTGCGGCGACAAT TGCGACTCGAGTACCGTGACGCCTGCTCTCGTTTACTTTCCACCCGGCCAATATGCTGTTTCGAAGCCCATTGTC GCTTATTACTATACGCAGCTGGTTGGCGATGCTGTCAATGTTCCCACCATTAAAGCCATGCCTGGCTTCAAGGGC ATTGCTGTCATTGACTCGAACCCTTACAAGGATGGTGGAGAAAACTGGTTTACCAACCAAAACAACTTTTTCCGT CAGATTCGCAACTTCAAGATCGATCTCACCGGCCTGCCCAAGTCTACTGGCACCGGTCTCCATTGGCAGGTTGCT CAAGCCACATCGCTGCAGAATATCGAGTTCAACATGATTAAGGATCAGAGCGAGGATAATAAGCAGCAAGGCATC TTCATGGAAAACGGCTCTGGTGGCTTCATGACAGACTTGACCTTCAATGGCGGCGGTCTCGGCGCCTTTTTTGGT AACCAGCAATTCACTACCCGCAACCTCAAGTTTAATGGCTGCCGCACTGGAATTCAGATGCAGTGGAATTGGCTC TGGACCTTTCACGACATGTCTATTCAAGGCTGCAAACTCGGCATCAACATGACGCAGGCTGAGGGCGCAGCTCAG ACTGTCGGTTCCATCATCATGCTGGACAGCACCATTGCCAATACAGAAGTGGGTGTTGCCACTATTTATAACCCA CAGCAGACTGGAACCAATGGCACCTTGGTCCTTGACAATGTCGACATGTCCTCCAATGTTCCTGTTGCCGTTCAG AATGGTGCCAATAGGCAGACGATTCTCAACGGCAACGCGCGCATTGGCTCATGGGTTCAAGGCCGCTCTTACCAA GGTGCTTCGGGCTCGGCTGGCCAGGGACCCAGGCCGACGATTGCTAAGCCTGCTGCCCTGATGGAAAAGGGCAAA TTCTTTGCTCGCAGCAAGCCTCAGTATAACAATGTGCCTGCTTCCAAGTTTGTTTCGGTCAAGTCCAAGGGCGCC AAGGGTGACGGCAGAAGTGACGACACTGAAGTCATTCAGTCCATTTTTGACAGCATCGGCCCCGACGAGATTGTC TACTTTGATCACGGCGCCTATGTTGTTACCGATACTATTCGGGTTCCCAAGAATGTTCGAGTTGTTGGTGAAATC TGGCCACTAATCATGGCGGGAGGCAACGACAACTTCAAGGACGAAAACAACCCCAAGCCCGTCTTCCAGGTGGGC CAAAGTGGCGATGTCGGTAATGTTGAAATGCAGGATCTCATGTTTGAGACGCTGGGCCCGCAGCCTGGTGCGATT CTTATGGAATTCAACGTTGCTGGCCAGTCCAAGGGCTCTGCCGGCCTGTGGGATGTCCACTTTCGTGTCGGCGGC TCGGCCGGCACCCAGTTGCAGTCTGACAGGTGTGCTAAGACGCCCAACTCTCGGACTGAACCCAACCCCCAGTGC ATGGGTGCGTTTATGCTGCTGCATATCACGCCTTCTGCTAGCCCATATCTGGAAAACACTTGGTTCTGGGTTGCC GACCACGAGCTTGACCTTCCTGATCACAGCCAAATCAATATTTTTAATGGCCGTGGTGTCTTGATTGAGAGCACA AAGGGCGCCTGGCTTTGGGGCACGTCGTCTGAGCATAGCGTCTTGTCCAACTACCAGCTCAACAAGGCCCAGAAT GTGCTCATGGCATCGATTCAATCTGAAACGGCCTATTTCCAGGGCAATCCTGATGCTCGTGTGCCCTATAGGACA AACACTGCATTTGCGGATCCCGATTTCTCGCAGTGCAAGGGGCCCAAGTGTGCGCGTACCTGGGGCTTGCGCATC AATGATTCCAAGGATGTCTTTGTCTATGGAGGCGGTCTTTACAGCTTTTTTGATAATTACACGCAGCAGTGCGTC AATTCCAATGATTGCCAGGACAACATGATCAACATTGATAACTCGCATGTCGAAATGTTTGGCATCAGCACCAAG GCCAGCATTTCCATGGTGACACTTAATGGCAAGACGGCCGCGATTGACTCGGACAACCGCAACATGTTCTGCGCC GCCATTGCAGTTTTCGAGGCGTCTTAG |
Gene | >OphauB2|173 ATGGGGCTGTCGACTGTTCTCGCAGCCTCCATCCTGGCTTTGCGCCTCTTTTCTCTACCGGTAGCTGCGTCGCCC GCCTTGTCAGCACCAGCCGCTCAAGACAATGGCGTGAGCCCAAACACTGCTGGAACTTGGTGGATGTCCCAGGTT AAGCGACAAGGCACCGTTGCCTATGCCAATGTGGGCGGCTACAAGGTCTTTCGCAACGTCAAGGACTTTGGCGCC AAGGGTGACGGCTCCAGCGACGATACAGCTGCCATTAATGCCGCCATTACGGAAGGAAACCGTTGCGGCGACAAT TGCGACTCGAGTACCGTGACGCCTGCTCTCGTTTACTTTCCACCCGGCCAATATGCTGTTTCGAAGCCCATTGTC GCTTATTACTATACGCAGCTGGTTGGCGATGCTGTCAATGTTCCCACCATTAAAGCCATGCCTGGCTTCAAGGGC ATTGCTGTCATTGACTCGAACCCTTACAAGGATGGTGGAGAAAACTGGTTTACCAACCAAAACAACTTTTTCCGT CAGATTCGCAACTTCAAGATCGATCTCACCGGCCTGCCCAAGTCTACTGGCACCGGTCTCCATTGGCAGGTTGCT CAAGCCACATCGCTGCAGAATATCGAGTTCAACATGATTAAGGATCAGAGCGAGGATAATAAGCAGCAAGGCATC TTCATGGAAAACGGCTCTGGTGGCTTCATGACAGACTTGACCTTCAATGGCGGCGGTCTCGGCGCCTTTTTTGGT AACCAGCAATTCACTACCCGCAACCTCAAGTTTAATGGCTGCCGCACTGGAATTCAGATGCAGTGGAATTGGCTC TGGACCTTTCACGACATGTCTATTCAAGGCTGCAAACTCGGCATCAACATGACGCAGGCTGAGGGCGCAGCTCAG ACTGTCGGTTCCATCATCATGCTGGACAGCACCATTGCCAATACAGAAGTGGGTGTTGCCACTATTTATAACCCA CAGCAGACTGGAACCAATGGCACCTTGGTCCTTGACAATGTCGACATGTCCTCCAATGTTCCTGTTGCCGTTCAG AATGGTGCCAATAGGCAGACGATTCTCAACGGCAACGCGCGCATTGGCTCATGGGTTCAAGGCCGCTCTTACCAA GGTGCTTCGGGCTCGGCTGGCCAGGGACCCAGGCCGACGATTGCTAAGCCTGCTGCCCTGATGGAAAAGGGCAAA TTCTTTGCTCGCAGCAAGCCTCAGTATAACAATGTGCCTGCTTCCAAGTTTGTTTCGGTCAAGTCCAAGGGCGCC AAGGGTGACGGCAGAAGTGACGACACTGAAGTCATTCAGTCCATTTTTGACAGCATCGGCCCCGACGAGATTGTC TACTTTGATCACGGCGCCTATGTTGTTACCGATACTATTCGGGTTCCCAAGAATGTTCGAGTTGTTGGTGAAATC TGGCCACTAATCATGGCGGGAGGCAACGACAACTTCAAGGACGAAAACAACCCCAAGCCCGTCTTCCAGGTGGGC CAAAGTGGCGATGTCGGTAATGTTGAAATGCAGGATCTCATGTTTGAGACGCTGGGCCCGCAGCCTGGTGCGATT CTTATGGAATTCAACGTTGCTGGCCAGTCCAAGGGCTCTGCCGGCCTGTGGGATGTCCACTTTCGTGTCGGCGGC TCGGCCGGCACCCAGTTGCAGTCTGACAGGTGTGCTAAGACGCCCAACTCTCGGACTGAACCCAACCCCCAGTGC ATGGGTGCGTTTATGCTGCTGCATATCACGCCTTCTGCTAGCCCATATCTGGAAAACACTTGGTTCTGGGTTGCC GACCACGAGCTTGACCTTCCTGATCACAGCCAAATCAATATTTTTAATGGCCGTGGTGTCTTGATTGAGAGCACA AAGGGCGCCTGGCTTTGGGGCACGTCGTCTGAGCATAGCGTCTTGTCCAACTACCAGCTCAACAAGGCCCAGAAT GTGCTCATGGCATCGATTCAATCTGAAACGGCCTATTTCCAGGGCAATCCTGATGCTCGTGTGCCCTATAGGACA AACACTGCATTTGCGGATCCCGATTTCTCGCAGTGCAAGGGGCCCAAGTGTGCGCGTACCTGGGGCTTGCGCATC AATGATTCCAAGGATGTCTTTGTCTATGGAGGCGGTCTTTACAGCTTTTTTGATAATTACACGCAGCAGTGCGTC AATTCCAATGATTGCCAGGACAACATGATCAACATTGATAACTCGCATGTCGAAATGTTTGGCATCAGCACCAAG GCCAGCATTTCCATGGTGACACTTAATGGCAAGACGGCCGCGATTGACTCGGACAACCGCAACATGTTCTGCGCC GCCATTGCAGTTTTCGAGGCGTCTTAG |