Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1702
Gene name
LocationContig_149:13487..16059
Strand+
Gene length (bp)2572
Transcript length (bp)2394
Coding sequence length (bp)2394
Protein length (aa) 798

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05786 Cnd2 Condensin complex subunit 2 1.8E-265 21 787

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7R3|CND2_SCHPO Condensin complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cnd2 PE=1 SV=1 28 786 2.0E-110
sp|P38170|CND2_YEAST Condensin complex subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRN1 PE=1 SV=3 91 796 4.0E-81
sp|Q564K3|CND2_ARATH Condensin complex subunit 2 OS=Arabidopsis thaliana GN=CAPH PE=1 SV=1 109 298 4.0E-32
sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1 102 274 2.0E-15
sp|Q564K3|CND2_ARATH Condensin complex subunit 2 OS=Arabidopsis thaliana GN=CAPH PE=1 SV=1 503 785 2.0E-13
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9Y7R3|CND2_SCHPO Condensin complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cnd2 PE=1 SV=1 28 786 2.0E-110
sp|P38170|CND2_YEAST Condensin complex subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BRN1 PE=1 SV=3 91 796 4.0E-81
sp|Q564K3|CND2_ARATH Condensin complex subunit 2 OS=Arabidopsis thaliana GN=CAPH PE=1 SV=1 109 298 4.0E-32
sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1 102 274 2.0E-15
sp|Q564K3|CND2_ARATH Condensin complex subunit 2 OS=Arabidopsis thaliana GN=CAPH PE=1 SV=1 503 785 2.0E-13
sp|Q15003|CND2_HUMAN Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3 25 286 3.0E-13
sp|Q8C156|CND2_MOUSE Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=1 SV=1 27 286 5.0E-13
sp|O13067|CND2_XENLA Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1 493 788 1.0E-12
sp|Q8C156|CND2_MOUSE Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=1 SV=1 493 785 3.0E-12
sp|Q15003|CND2_HUMAN Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3 458 787 1.0E-08
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GO

GO Term Description Terminal node
GO:0007076 mitotic chromosome condensation Yes
GO:0000796 condensin complex Yes
GO:0051276 chromosome organization No
GO:0032991 protein-containing complex No
GO:0071840 cellular component organization or biogenesis No
GO:0009987 cellular process No
GO:0022402 cell cycle process No
GO:0008150 biological_process No
GO:0006996 organelle organization No
GO:0016043 cellular component organization No
GO:0005575 cellular_component No
GO:0030261 chromosome condensation No
GO:0044815 DNA packaging complex No
GO:1903047 mitotic cell cycle process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1702
MPRVAQVPRAASARSVTGAQATASPAKSPVKIPLNDDAQERGQRMTCRKALHDKQIKQIRAAATPRKTAAQDGSE
SEACLAASATPRGGLDDDDDGLGASVTPMKRVPILANFEEWMKMATDNKINATNSWNFALIDYFHDMSLLKEGDG
VNFQKASCTLDGCVKIYTNRVDSVATETGKLLSGLADSNSSKNKGRHGDAESDQEGDEELDQEGNVKKKSKNKHS
RGSEATLAPSFSALQLKRFELEFTVDPLFKKASADFDEGGAKGLLLNHLMIDSQGRIVFDSSDDCADVAAPGKQD
GHAAGDEAEHDDHAGEADEADEPQAEPQAESQAEPQTQAQARQVEGNSSQTQHGMAPRIDLRCLGRKFFAHLAQL
DELDVCPSLKHFDLGDPLGSLKIPLLKAADDADRSGLFIDEDDAAKFDNQDDHGLGLGSFDMEDNETAFGQGGEA
WARETAVVGTHERQEQEIEAQGEYVVAMAQATRRDSLHQDMLGFFDQALHKNWTSAQHWRIRKIKEGNKAPAEAR
RRRDKEAFEIDFGAPLQAQQADMVLTPAASASAICLPKKDWTCKSRNLVPDDKHFASSSLISLFLKPKARLTRRR
HCLSHAPDAMDEAFWAKRQHSPPDDDAAPPPGDYDANFFHDDGLPFAASHDNDHGDLPPDPDAQAAVSQTLFPLA
QPAAMGAFGSTLVTQTRRIRPDYVQYARKAKKVDVRRLKQELWKGMDFAGPASLDKSLRFTDVMDSLQAVYPKPV
MDDISTSYCFISLLHLANEEGLVIEHTPDLTELHIKRDSTALVDPAH*
Coding >OphauB2|1702
ATGCCTCGTGTTGCTCAGGTTCCCCGTGCCGCCAGCGCGAGGTCAGTCACTGGCGCGCAGGCCACGGCATCGCCC
GCCAAGTCGCCCGTCAAGATTCCGCTCAACGACGACGCGCAAGAACGCGGGCAGAGAATGACGTGTCGCAAGGCG
CTCCACGACAAGCAAATCAAGCAGATTCGCGCGGCCGCCACGCCCCGCAAGACAGCGGCACAAGATGGTTCGGAA
AGCGAAGCATGCCTTGCTGCGTCGGCGACGCCCCGCGGTGGTCTTGACGACGACGACGACGGCCTTGGCGCCTCA
GTGACGCCCATGAAGCGCGTGCCCATTCTGGCAAACTTTGAGGAGTGGATGAAGATGGCGACGGACAACAAGATC
AATGCCACCAACTCGTGGAACTTTGCCCTCATTGACTACTTTCACGACATGTCGCTGCTCAAGGAGGGCGATGGC
GTCAACTTTCAAAAGGCCAGCTGCACCCTGGACGGATGTGTCAAGATATACACAAACCGCGTCGACAGCGTTGCC
ACGGAAACGGGCAAGCTCCTGAGCGGGCTTGCCGACAGCAACTCGAGCAAGAACAAGGGGCGCCACGGCGACGCC
GAGAGCGACCAAGAGGGTGACGAGGAGCTTGACCAAGAGGGCAACGTCAAGAAGAAGTCCAAGAACAAGCACTCG
CGAGGGTCCGAGGCGACGCTGGCACCGTCGTTTAGCGCACTGCAGCTAAAGAGATTTGAGCTCGAGTTCACCGTC
GACCCGCTCTTCAAGAAGGCATCGGCCGACTTTGACGAAGGCGGTGCCAAGGGACTGCTGCTCAACCACCTCATG
ATTGACTCGCAGGGGCGCATTGTGTTTGACAGTAGCGACGATTGCGCCGACGTGGCGGCGCCTGGCAAGCAAGAC
GGGCACGCGGCTGGCGACGAGGCTGAGCATGACGACCATGCCGGCGAGGCTGACGAGGCTGACGAGCCCCAGGCC
GAGCCCCAGGCCGAGTCCCAGGCCGAGCCCCAGACCCAGGCCCAGGCCCGGCAGGTCGAGGGCAACAGCAGCCAG
ACGCAGCATGGCATGGCGCCTCGCATTGACCTGAGGTGCTTGGGCCGCAAATTCTTTGCCCACCTGGCCCAGCTT
GACGAGCTCGACGTGTGTCCCTCACTCAAGCACTTTGACCTGGGAGACCCCCTCGGCTCCCTCAAGATTCCCTTG
CTCAAGGCAGCCGACGACGCAGACAGGTCGGGCCTCTTTATCGACGAGGACGACGCGGCCAAGTTTGACAACCAA
GACGACCATGGGCTCGGCCTGGGCAGCTTCGACATGGAGGACAACGAGACGGCCTTTGGCCAGGGCGGCGAGGCC
TGGGCGCGGGAGACGGCCGTTGTCGGCACGCACGAGAGGCAGGAGCAAGAGATTGAGGCGCAGGGCGAATACGTG
GTGGCCATGGCGCAAGCCACGAGGCGCGACTCGCTGCACCAAGACATGCTGGGCTTCTTTGACCAGGCCTTGCAC
AAGAACTGGACGAGCGCGCAGCACTGGCGCATCCGCAAAATCAAGGAGGGCAACAAGGCTCCGGCCGAGGCGAGG
AGGCGCCGGGACAAGGAGGCTTTTGAAATCGACTTTGGCGCGCCGCTGCAGGCCCAGCAGGCCGACATGGTGCTG
ACGCCGGCAGCCTCGGCCTCGGCCATCTGCCTGCCCAAGAAGGACTGGACTTGCAAGTCGCGCAACCTGGTGCCC
GACGACAAGCACTTTGCCTCGTCCTCCCTCATCAGCCTCTTTCTCAAGCCCAAGGCCCGCCTCACGCGCCGTCGC
CACTGCCTCTCGCATGCCCCCGACGCCATGGACGAGGCCTTTTGGGCCAAGCGCCAGCACTCGCCCCCCGACGAC
GACGCTGCGCCCCCGCCCGGCGACTACGACGCAAACTTCTTCCACGACGACGGCCTGCCCTTTGCCGCCTCGCAC
GACAATGACCACGGCGACTTGCCCCCCGACCCAGACGCCCAAGCAGCCGTCAGCCAGACCCTCTTTCCCCTCGCC
CAGCCCGCCGCCATGGGCGCCTTTGGCTCAACCCTCGTGACGCAGACGCGCCGCATCAGACCCGACTATGTCCAG
TACGCCCGCAAGGCCAAAAAGGTGGATGTGCGCCGCCTCAAGCAAGAATTATGGAAGGGCATGGACTTTGCCGGC
CCTGCCAGCCTCGACAAGAGCCTCAGGTTTACAGACGTCATGGACTCTCTCCAGGCCGTCTACCCCAAGCCCGTC
ATGGACGACATTTCAACCTCGTACTGCTTCATTTCCTTGCTGCATCTCGCCAATGAAGAGGGCCTTGTCATTGAG
CACACCCCCGACCTGACCGAGCTGCACATCAAAAGGGACTCGACGGCACTTGTTGACCCCGCCCACTAG
Transcript >OphauB2|1702
ATGCCTCGTGTTGCTCAGGTTCCCCGTGCCGCCAGCGCGAGGTCAGTCACTGGCGCGCAGGCCACGGCATCGCCC
GCCAAGTCGCCCGTCAAGATTCCGCTCAACGACGACGCGCAAGAACGCGGGCAGAGAATGACGTGTCGCAAGGCG
CTCCACGACAAGCAAATCAAGCAGATTCGCGCGGCCGCCACGCCCCGCAAGACAGCGGCACAAGATGGTTCGGAA
AGCGAAGCATGCCTTGCTGCGTCGGCGACGCCCCGCGGTGGTCTTGACGACGACGACGACGGCCTTGGCGCCTCA
GTGACGCCCATGAAGCGCGTGCCCATTCTGGCAAACTTTGAGGAGTGGATGAAGATGGCGACGGACAACAAGATC
AATGCCACCAACTCGTGGAACTTTGCCCTCATTGACTACTTTCACGACATGTCGCTGCTCAAGGAGGGCGATGGC
GTCAACTTTCAAAAGGCCAGCTGCACCCTGGACGGATGTGTCAAGATATACACAAACCGCGTCGACAGCGTTGCC
ACGGAAACGGGCAAGCTCCTGAGCGGGCTTGCCGACAGCAACTCGAGCAAGAACAAGGGGCGCCACGGCGACGCC
GAGAGCGACCAAGAGGGTGACGAGGAGCTTGACCAAGAGGGCAACGTCAAGAAGAAGTCCAAGAACAAGCACTCG
CGAGGGTCCGAGGCGACGCTGGCACCGTCGTTTAGCGCACTGCAGCTAAAGAGATTTGAGCTCGAGTTCACCGTC
GACCCGCTCTTCAAGAAGGCATCGGCCGACTTTGACGAAGGCGGTGCCAAGGGACTGCTGCTCAACCACCTCATG
ATTGACTCGCAGGGGCGCATTGTGTTTGACAGTAGCGACGATTGCGCCGACGTGGCGGCGCCTGGCAAGCAAGAC
GGGCACGCGGCTGGCGACGAGGCTGAGCATGACGACCATGCCGGCGAGGCTGACGAGGCTGACGAGCCCCAGGCC
GAGCCCCAGGCCGAGTCCCAGGCCGAGCCCCAGACCCAGGCCCAGGCCCGGCAGGTCGAGGGCAACAGCAGCCAG
ACGCAGCATGGCATGGCGCCTCGCATTGACCTGAGGTGCTTGGGCCGCAAATTCTTTGCCCACCTGGCCCAGCTT
GACGAGCTCGACGTGTGTCCCTCACTCAAGCACTTTGACCTGGGAGACCCCCTCGGCTCCCTCAAGATTCCCTTG
CTCAAGGCAGCCGACGACGCAGACAGGTCGGGCCTCTTTATCGACGAGGACGACGCGGCCAAGTTTGACAACCAA
GACGACCATGGGCTCGGCCTGGGCAGCTTCGACATGGAGGACAACGAGACGGCCTTTGGCCAGGGCGGCGAGGCC
TGGGCGCGGGAGACGGCCGTTGTCGGCACGCACGAGAGGCAGGAGCAAGAGATTGAGGCGCAGGGCGAATACGTG
GTGGCCATGGCGCAAGCCACGAGGCGCGACTCGCTGCACCAAGACATGCTGGGCTTCTTTGACCAGGCCTTGCAC
AAGAACTGGACGAGCGCGCAGCACTGGCGCATCCGCAAAATCAAGGAGGGCAACAAGGCTCCGGCCGAGGCGAGG
AGGCGCCGGGACAAGGAGGCTTTTGAAATCGACTTTGGCGCGCCGCTGCAGGCCCAGCAGGCCGACATGGTGCTG
ACGCCGGCAGCCTCGGCCTCGGCCATCTGCCTGCCCAAGAAGGACTGGACTTGCAAGTCGCGCAACCTGGTGCCC
GACGACAAGCACTTTGCCTCGTCCTCCCTCATCAGCCTCTTTCTCAAGCCCAAGGCCCGCCTCACGCGCCGTCGC
CACTGCCTCTCGCATGCCCCCGACGCCATGGACGAGGCCTTTTGGGCCAAGCGCCAGCACTCGCCCCCCGACGAC
GACGCTGCGCCCCCGCCCGGCGACTACGACGCAAACTTCTTCCACGACGACGGCCTGCCCTTTGCCGCCTCGCAC
GACAATGACCACGGCGACTTGCCCCCCGACCCAGACGCCCAAGCAGCCGTCAGCCAGACCCTCTTTCCCCTCGCC
CAGCCCGCCGCCATGGGCGCCTTTGGCTCAACCCTCGTGACGCAGACGCGCCGCATCAGACCCGACTATGTCCAG
TACGCCCGCAAGGCCAAAAAGGTGGATGTGCGCCGCCTCAAGCAAGAATTATGGAAGGGCATGGACTTTGCCGGC
CCTGCCAGCCTCGACAAGAGCCTCAGGTTTACAGACGTCATGGACTCTCTCCAGGCCGTCTACCCCAAGCCCGTC
ATGGACGACATTTCAACCTCGTACTGCTTCATTTCCTTGCTGCATCTCGCCAATGAAGAGGGCCTTGTCATTGAG
CACACCCCCGACCTGACCGAGCTGCACATCAAAAGGGACTCGACGGCACTTGTTGACCCCGCCCACTAG
Gene >OphauB2|1702
ATGCCTCGTGTTGCTCAGGTTCCCCGTGCCGCCAGCGCGAGGTCAGTCACTGGCGCGCAGGCCACGGCATCGCCC
GCCAAGTCGCCCGTCAAGTGAGTCTTGTCCCTCGTTCTCTTCTCCTAGTCGTGTTTTGGCATCATGTGGGTGGCT
CACGCAGCAAGATGCAGGATTCCGCTCAACGACGACGCGCAAGAACGCGGGCAGAGAATGACGTGTCGCAAGGCG
CTCCACGACAAGCAAATCAAGCAGATTCGCGCGGCCGCCACGCCCCGCAAGACAGCGGCACAAGATGGTTCGGAA
AGCGAAGCATGCCTTGCTGCGTCGGCGACGCCCCGCGGTGGTCTTGACGACGACGACGACGGCCTTGGCGCCTCA
GTGACGCCCATGAAGCGCGTGCCCATTCTGGCAAACTTTGAGGAGTGGATGAAGATGGCGACGGACAACAAGATC
AATGCCACCAACTCGTGGAACTTTGCCCTCATTGACTACTTTCACGACATGTCGCTGCTCAAGGAGGGCGATGGC
GTCAACTTTCAAAAGGCCAGCTGCACCCTGGACGGATGTGTCAAGATATACACAAACCGCGTCGACAGCGTTGCC
ACGGAAACGGGCAAGCTCCTGAGCGGGCTTGCCGACAGCAACTCGAGCAAGAACAAGGGGCGCCACGGCGACGCC
GAGAGCGACCAAGAGGGTGACGAGGAGCTTGACCAAGAGGGCAACGTCAAGAAGAAGTCCAAGAACAAGGTAGGC
AGGCCCAGAGCACTTGCAGCGGCAGGCTACTGACGCGAGGCAGCACTCGCGAGGGTCCGAGGCGACGCTGGCACC
GTCGTTTAGCGCACTGCAGCTAAAGAGATTTGAGCTCGAGTTCACCGTCGACCCGCTCTTCAAGAAGGCATCGGC
CGACTTTGACGAAGGCGGTGCCAAGGGACTGCTGCTCAACCACCTCATGATTGACTCGCAGGGGCGCATTGTGTT
TGACAGTAGCGACGATTGCGCCGACGTGGCGGCGCCTGGCAAGCAAGACGGGCACGCGGCTGGCGACGAGGCTGA
GCATGACGACCATGCCGGCGAGGCTGACGAGGCTGACGAGCCCCAGGCCGAGCCCCAGGCCGAGTCCCAGGCCGA
GCCCCAGACCCAGGCCCAGGCCCGGCAGGTCGAGGGCAACAGCAGCCAGACGCAGCATGGCATGGCGCCTCGCAT
TGACCTGAGGTGCTTGGGCCGCAAATTCTTTGCCCACCTGGCCCAGCTTGACGAGCTCGACGTGTGTCCCTCACT
CAAGCACTTTGACCTGGGAGACCCCCTCGGCTCCCTCAAGATTCCCTTGCTCAAGGCAGCCGACGACGCAGACAG
GTCGGGCCTCTTTATCGACGAGGACGACGCGGCCAAGTTTGACAACCAAGACGACCATGGGCTCGGCCTGGGCAG
CTTCGACATGGAGGACAACGAGACGGCCTTTGGCCAGGGCGGCGAGGCCTGGGCGCGGGAGACGGCCGTTGTCGG
CACGCACGAGAGGCAGGAGCAAGAGATTGAGGCGCAGGGCGAATACGTGGTGGCCATGGCGCAAGCCACGAGGCG
CGACTCGCTGCACCAAGACATGCTGGGCTTCTTTGACCAGGCCTTGCACAAGAACTGGACGAGCGCGCAGCACTG
GCGCATCCGCAAAATCAAGGAGGGCAACAAGGCTCCGGCCGAGGCGAGGAGGCGCCGGGACAAGGAGGCTTTTGA
AATCGACTTTGGCGCGCCGCTGCAGGCCCAGCAGGCCGACATGGTGCTGACGCCGGCAGCCTCGGCCTCGGCCAT
CTGCCTGCCCAAGAAGGACTGGACTTGCAAGTCGCGCAACCTGGTGCCCGACGACAAGCACTTTGCCTCGTCCTC
CCTCATCAGCCTCTTTCTCAAGCCCAAGGCCCGCCTCACGCGCCGTCGCCACTGCCTCTCGCATGCCCCCGACGC
CATGGACGAGGCCTTTTGGGCCAAGCGCCAGCACTCGCCCCCCGACGACGACGCTGCGCCCCCGCCCGGCGACTA
CGACGCAAACTTCTTCCACGACGACGGCCTGCCCTTTGCCGCCTCGCACGACAATGACCACGGCGACTTGCCCCC
CGACCCAGACGCCCAAGCAGCCGTCAGCCAGACCCTCTTTCCCCTCGCCCAGCCCGCCGCCATGGGCGCCTTTGG
CTCAACCCTCGTGACGCAGACGCGCCGCATCAGACCCGACTATGTCCAGTACGCCCGCAAGGCCAAAAAGGTGGA
TGTGCGCCGCCTCAAGCAAGAATTATGGAAGGGCATGGACTTTGCCGTGAGCACCCCGTCTCCCTGCTGCCCCTC
GCCGCTGACTTGCCTTCTCCCACAGGGCCCTGCCAGCCTCGACAAGAGCCTCAGGTTTACAGACGTCATGGACTC
TCTCCAGGCCGTCTACCCCAAGCCCGTCATGGACGACATTTCAACCTCGTACTGCTTCATTTCCTTGCTGCATCT
CGCCAATGAAGAGGGCCTTGTCATTGAGCACACCCCCGACCTGACCGAGCTGCACATCAAAAGGGACTCGACGGC
ACTTGTTGACCCCGCCCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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