Protein ID | OphauB2|1687 |
Gene name | |
Location | Contig_148:25978..26806 |
Strand | + |
Gene length (bp) | 828 |
Transcript length (bp) | 828 |
Coding sequence length (bp) | 828 |
Protein length (aa) | 276 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13821 | DUF4187 | Domain of unknown function (DUF4187) | 2.7E-18 | 224 | 274 |
PF01585 | G-patch | G-patch domain | 4.3E-07 | 75 | 118 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q6DGZ0|GPT11_DANRE | G patch domain-containing protein 11 OS=Danio rerio GN=gpatch11 PE=2 SV=1 | 9 | 275 | 7.0E-22 |
sp|Q6DF57|GPT11_XENTR | G patch domain-containing protein 11 OS=Xenopus tropicalis GN=gpatch11 PE=2 SV=1 | 9 | 275 | 5.0E-18 |
sp|Q3UFS4|GPT11_MOUSE | G patch domain-containing protein 11 OS=Mus musculus GN=Gpatch11 PE=1 SV=2 | 8 | 275 | 4.0E-17 |
sp|Q8N954|GPT11_HUMAN | G patch domain-containing protein 11 OS=Homo sapiens GN=GPATCH11 PE=1 SV=3 | 8 | 275 | 1.0E-16 |
sp|Q2KI19|GPT11_BOVIN | G patch domain-containing protein 11 OS=Bos taurus GN=GPATCH11 PE=2 SV=2 | 8 | 275 | 1.0E-16 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0097159 | organic cyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 68 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >OphauB2|1687 MAGTRDNADDQDYMNMSFADSDAKPETSLQRTRRLKLEALERGMVKSKAQHEQEVEAARKKGLATSLLHGPGAQQ SKGLAMMAKMGFTGGGLGKTADGTATREPITISIKDGRGGIGLDSDKKRQQVDDAAHQDSLRAKRARCDAHDYRQ RIGREQQEARRQAQFQAAQRLAQRLDQDGGNPPEQPVPLLYRRLVRQDHEAQDYATHYPTDSFHDDVELDHDAEL DAFDALSPSDRLSKALQYLRSKHYYCFWCKMAYPTHHLTGCPGVTEEHHD* |
Coding | >OphauB2|1687 ATGGCAGGCACGCGCGACAATGCAGACGACCAAGACTACATGAACATGTCGTTTGCCGACAGCGACGCCAAACCA GAAACGTCGCTGCAACGCACCCGGCGGCTCAAGCTCGAGGCGCTCGAGCGCGGCATGGTCAAGTCCAAGGCACAG CATGAGCAAGAAGTCGAGGCAGCGCGCAAAAAGGGCCTCGCGACCTCTCTTCTCCATGGGCCTGGGGCGCAACAG AGCAAGGGCCTGGCCATGATGGCCAAGATGGGCTTTACGGGCGGCGGGCTCGGCAAGACGGCAGATGGCACAGCG ACACGCGAACCCATAACCATCAGCATCAAGGACGGCCGCGGCGGCATTGGCCTCGACAGCGACAAGAAGCGGCAG CAAGTCGACGATGCTGCACATCAAGACTCTCTGCGCGCCAAGAGGGCCAGATGCGACGCCCACGACTATCGCCAG CGCATCGGCCGCGAGCAGCAAGAGGCGCGGCGCCAAGCACAGTTCCAGGCCGCCCAGAGACTGGCCCAGCGCCTC GACCAAGATGGCGGCAATCCGCCCGAGCAGCCAGTCCCGCTCCTCTACCGCCGCCTCGTGCGCCAGGACCACGAG GCCCAAGACTACGCCACACACTACCCGACAGACTCTTTCCACGACGATGTAGAGCTCGACCACGATGCAGAGCTC GACGCCTTTGATGCACTGAGCCCTAGCGACCGCTTATCCAAAGCTCTGCAGTACCTTCGCAGCAAACACTACTAC TGTTTCTGGTGCAAAATGGCCTATCCCACCCACCACCTCACCGGATGTCCTGGCGTTACAGAGGAGCATCATGAC TGA |
Transcript | >OphauB2|1687 ATGGCAGGCACGCGCGACAATGCAGACGACCAAGACTACATGAACATGTCGTTTGCCGACAGCGACGCCAAACCA GAAACGTCGCTGCAACGCACCCGGCGGCTCAAGCTCGAGGCGCTCGAGCGCGGCATGGTCAAGTCCAAGGCACAG CATGAGCAAGAAGTCGAGGCAGCGCGCAAAAAGGGCCTCGCGACCTCTCTTCTCCATGGGCCTGGGGCGCAACAG AGCAAGGGCCTGGCCATGATGGCCAAGATGGGCTTTACGGGCGGCGGGCTCGGCAAGACGGCAGATGGCACAGCG ACACGCGAACCCATAACCATCAGCATCAAGGACGGCCGCGGCGGCATTGGCCTCGACAGCGACAAGAAGCGGCAG CAAGTCGACGATGCTGCACATCAAGACTCTCTGCGCGCCAAGAGGGCCAGATGCGACGCCCACGACTATCGCCAG CGCATCGGCCGCGAGCAGCAAGAGGCGCGGCGCCAAGCACAGTTCCAGGCCGCCCAGAGACTGGCCCAGCGCCTC GACCAAGATGGCGGCAATCCGCCCGAGCAGCCAGTCCCGCTCCTCTACCGCCGCCTCGTGCGCCAGGACCACGAG GCCCAAGACTACGCCACACACTACCCGACAGACTCTTTCCACGACGATGTAGAGCTCGACCACGATGCAGAGCTC GACGCCTTTGATGCACTGAGCCCTAGCGACCGCTTATCCAAAGCTCTGCAGTACCTTCGCAGCAAACACTACTAC TGTTTCTGGTGCAAAATGGCCTATCCCACCCACCACCTCACCGGATGTCCTGGCGTTACAGAGGAGCATCATGAC TGA |
Gene | >OphauB2|1687 ATGGCAGGCACGCGCGACAATGCAGACGACCAAGACTACATGAACATGTCGTTTGCCGACAGCGACGCCAAACCA GAAACGTCGCTGCAACGCACCCGGCGGCTCAAGCTCGAGGCGCTCGAGCGCGGCATGGTCAAGTCCAAGGCACAG CATGAGCAAGAAGTCGAGGCAGCGCGCAAAAAGGGCCTCGCGACCTCTCTTCTCCATGGGCCTGGGGCGCAACAG AGCAAGGGCCTGGCCATGATGGCCAAGATGGGCTTTACGGGCGGCGGGCTCGGCAAGACGGCAGATGGCACAGCG ACACGCGAACCCATAACCATCAGCATCAAGGACGGCCGCGGCGGCATTGGCCTCGACAGCGACAAGAAGCGGCAG CAAGTCGACGATGCTGCACATCAAGACTCTCTGCGCGCCAAGAGGGCCAGATGCGACGCCCACGACTATCGCCAG CGCATCGGCCGCGAGCAGCAAGAGGCGCGGCGCCAAGCACAGTTCCAGGCCGCCCAGAGACTGGCCCAGCGCCTC GACCAAGATGGCGGCAATCCGCCCGAGCAGCCAGTCCCGCTCCTCTACCGCCGCCTCGTGCGCCAGGACCACGAG GCCCAAGACTACGCCACACACTACCCGACAGACTCTTTCCACGACGATGTAGAGCTCGACCACGATGCAGAGCTC GACGCCTTTGATGCACTGAGCCCTAGCGACCGCTTATCCAAAGCTCTGCAGTACCTTCGCAGCAAACACTACTAC TGTTTCTGGTGCAAAATGGCCTATCCCACCCACCACCTCACCGGATGTCCTGGCGTTACAGAGGAGCATCATGAC TGA |