© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1604 |
| Gene name | |
| Location | Contig_143:53311..53902 |
| Strand | + |
| Gene length (bp) | 591 |
| Transcript length (bp) | 357 |
| Coding sequence length (bp) | 357 |
| Protein length (aa) | 119 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06212 | GRIM-19 | GRIM-19 protein | 4.6E-23 | 2 | 108 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0MQ88|NDUAD_PONPY | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pongo pygmaeus GN=NDUFA13 PE=2 SV=3 | 3 | 110 | 5.0E-16 |
| sp|Q9P0J0|NDUAD_HUMAN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens GN=NDUFA13 PE=1 SV=3 | 1 | 110 | 1.0E-15 |
| sp|Q0MQ89|NDUAD_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla GN=NDUFA13 PE=2 SV=3 | 1 | 110 | 1.0E-15 |
| sp|Q0MQ90|NDUAD_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pan troglodytes GN=NDUFA13 PE=2 SV=3 | 3 | 110 | 1.0E-15 |
| sp|Q95KV7|NDUAD_BOVIN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus GN=NDUFA13 PE=1 SV=3 | 3 | 110 | 2.0E-15 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q0MQ88|NDUAD_PONPY | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pongo pygmaeus GN=NDUFA13 PE=2 SV=3 | 3 | 110 | 5.0E-16 |
| sp|Q9P0J0|NDUAD_HUMAN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens GN=NDUFA13 PE=1 SV=3 | 1 | 110 | 1.0E-15 |
| sp|Q0MQ89|NDUAD_GORGO | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla GN=NDUFA13 PE=2 SV=3 | 1 | 110 | 1.0E-15 |
| sp|Q0MQ90|NDUAD_PANTR | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pan troglodytes GN=NDUFA13 PE=2 SV=3 | 3 | 110 | 1.0E-15 |
| sp|Q95KV7|NDUAD_BOVIN | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus GN=NDUFA13 PE=1 SV=3 | 3 | 110 | 2.0E-15 |
| sp|Q4R6H1|NDUAD_MACFA | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Macaca fascicularis GN=NDUFA13 PE=2 SV=1 | 3 | 110 | 3.0E-15 |
| sp|Q9ERS2|NDUAD_MOUSE | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Mus musculus GN=Ndufa13 PE=1 SV=3 | 3 | 110 | 4.0E-14 |
| sp|Q8RWA7|NDADA_ARATH | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-A OS=Arabidopsis thaliana GN=MEE4 PE=2 SV=1 | 3 | 109 | 1.0E-10 |
| sp|O49313|NDADB_ARATH | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-B OS=Arabidopsis thaliana GN=At2g33220 PE=2 SV=1 | 1 | 109 | 3.0E-10 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 43 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1604 MAQDMPPKGGYQPVQYKRNLPARGFRPGVLLLGMGGIMVYGWYKLIPGIREANELAREKMWARINLIPLLQAEED RDQVRRYWADQQRERDLLGENMRVYHSDRFVRPTLSISPPTTK* |
| Coding | >OphauB2|1604 ATGGCGCAGGACATGCCTCCCAAGGGGGGCTACCAGCCAGTACAGTACAAGAGAAACTTGCCAGCGAGGGGATTT AGACCTGGCGTATTGCTTCTAGGCATGGGTGGGATAATGGTGTATGGATGGTATAAGCTCATTCCCGGGATCCGC GAAGCCAATGAATTGGCAAGGGAGAAAATGTGGGCGAGGATTAATCTCATTCCCCTACTCCAGGCAGAAGAGGAT AGGGACCAGGTTCGGCGGTACTGGGCCGACCAGCAGCGTGAGCGAGACTTGCTGGGCGAGAATATGCGCGTCTAT CACAGTGATCGCTTTGTCCGCCCAACCCTCTCCATCTCACCACCTACAACTAAATAA |
| Transcript | >OphauB2|1604 ATGGCGCAGGACATGCCTCCCAAGGGGGGCTACCAGCCAGTACAGTACAAGAGAAACTTGCCAGCGAGGGGATTT AGACCTGGCGTATTGCTTCTAGGCATGGGTGGGATAATGGTGTATGGATGGTATAAGCTCATTCCCGGGATCCGC GAAGCCAATGAATTGGCAAGGGAGAAAATGTGGGCGAGGATTAATCTCATTCCCCTACTCCAGGCAGAAGAGGAT AGGGACCAGGTTCGGCGGTACTGGGCCGACCAGCAGCGTGAGCGAGACTTGCTGGGCGAGAATATGCGCGTCTAT CACAGTGATCGCTTTGTCCGCCCAACCCTCTCCATCTCACCACCTACAACTAAATAA |
| Gene | >OphauB2|1604 ATGGCGCAGGACATGCCTCCCAAGGGGGGCTACCAGCCAGTACAGTACAAGGTTAAACAACCCCCTCCCCCCCAG CGCGCGCCGGTTCAAGCTAAATGGGGGAGGGGGGGTTTTAGAGAAACTTGCCAGCGAGGGGATTTAGACCTGGCG TATTGCTTCTAGGCATGGGTGGGATAATGGTGTATGGATGGTATAAGCTCATTCCCGGGATCCGCGAAGCCAAGT ACGTCGTCTTTTTTTTTTTTCAGGAAAAAAGATGTTTTAGCAGAGTATGAGCTAACAAGCACCCGCGGGGGGATA GTGAATTGGCAAGGGAGAAAATGTGGGCGAGGATTAATCTCATTCCCCTACTCCAGGCAGAAGAGGATAGGGACC AGGTTCGGCGGTACTGGGCCGACCAGCAGCGTGAGCGAGACTTGCTGGGCGAGAATATGCGCGTCTATCACAGTG ATCGGTACGTGCAATTCTTTTTTTCTTGTTTTTTTTTGGTCCCTCCTTTGTTTGGCCTCGTTGCAAAAAAAAAAA AAAATACTAACTCTTACAAGCTTTGTCCGCCCAACCCTCTCCATCTCACCACCTACAACTAAATAA |