© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1508 |
| Gene name | |
| Location | Contig_14:169061..170153 |
| Strand | - |
| Gene length (bp) | 1092 |
| Transcript length (bp) | 954 |
| Coding sequence length (bp) | 954 |
| Protein length (aa) | 318 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00106 | adh_short | short chain dehydrogenase | 5.6E-22 | 8 | 237 |
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 1.2E-14 | 75 | 252 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8MJY8|PGDH_MACFA | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1 | 5 | 289 | 5.0E-16 |
| sp|P15428|PGDH_HUMAN | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1 | 5 | 289 | 2.0E-15 |
| sp|Q8VCC1|PGDH_MOUSE | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=1 SV=1 | 5 | 289 | 3.0E-14 |
| sp|Q3T0C2|PGDH_BOVIN | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Bos taurus GN=HPGD PE=2 SV=1 | 5 | 289 | 4.0E-14 |
| sp|P70684|PGDH_CAVPO | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1 | 5 | 239 | 6.0E-13 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q8MJY8|PGDH_MACFA | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Macaca fascicularis GN=HPGD PE=2 SV=1 | 5 | 289 | 5.0E-16 |
| sp|P15428|PGDH_HUMAN | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Homo sapiens GN=HPGD PE=1 SV=1 | 5 | 289 | 2.0E-15 |
| sp|Q8VCC1|PGDH_MOUSE | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Mus musculus GN=Hpgd PE=1 SV=1 | 5 | 289 | 3.0E-14 |
| sp|Q3T0C2|PGDH_BOVIN | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Bos taurus GN=HPGD PE=2 SV=1 | 5 | 289 | 4.0E-14 |
| sp|P70684|PGDH_CAVPO | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Cavia porcellus GN=HPGD PE=2 SV=1 | 5 | 239 | 6.0E-13 |
| sp|O08699|PGDH_RAT | 15-hydroxyprostaglandin dehydrogenase [NAD(+)] OS=Rattus norvegicus GN=Hpgd PE=2 SV=2 | 5 | 288 | 1.0E-11 |
| sp|P00335|RIDH_ENTAE | Ribitol 2-dehydrogenase OS=Enterobacter aerogenes GN=rbtD PE=1 SV=1 | 1 | 260 | 9.0E-11 |
| sp|O80713|SDR3A_ARATH | Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1 | 5 | 283 | 2.0E-10 |
| sp|Q9BPX1|DHB14_HUMAN | 17-beta-hydroxysteroid dehydrogenase 14 OS=Homo sapiens GN=HSD17B14 PE=1 SV=1 | 58 | 235 | 2.0E-08 |
| sp|H9BFQ1|TPRL2_ERYCB | Tropinone reductase-like 2 OS=Erythroxylum coca PE=2 SV=1 | 5 | 233 | 2.0E-08 |
| sp|O42866|FABG_SCHPO | 3-oxoacyl-[acyl-carrier-protein] reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=oar2 PE=3 SV=1 | 99 | 276 | 3.0E-08 |
| sp|Q94K41|SDR3B_ARATH | Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1 | 5 | 282 | 4.0E-08 |
| sp|H9BFQ0|TPRL1_ERYCB | Tropinone reductase-like 1 OS=Erythroxylum coca PE=2 SV=1 | 5 | 233 | 5.0E-08 |
| sp|Q82IY9|PTLF_STRAW | 1-deoxy-11-beta-hydroxypentalenate dehydrogenase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=ptlF PE=1 SV=1 | 10 | 265 | 2.0E-07 |
| sp|Q9MYP6|DHB14_BOVIN | 17-beta-hydroxysteroid dehydrogenase 14 OS=Bos taurus GN=HSD17B14 PE=2 SV=1 | 1 | 276 | 4.0E-07 |
| sp|Q49WS9|Y1627_STAS1 | Uncharacterized oxidoreductase SSP1627 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1627 PE=3 SV=1 | 3 | 233 | 7.0E-07 |
| sp|P87017|AFLH_ASPPA | 5'-hydroxyaverantin dehydrogenase OS=Aspergillus parasiticus GN=adhA PE=1 SV=2 | 4 | 240 | 7.0E-07 |
| sp|P66782|Y1385_MYCBO | Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=fabG2 PE=3 SV=1 | 1 | 277 | 3.0E-06 |
| sp|P9WGR9|Y1350_MYCTU | Uncharacterized oxidoreductase Rv1350 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=fabG2 PE=1 SV=1 | 1 | 277 | 3.0E-06 |
| sp|P9WGR8|Y1350_MYCTO | Uncharacterized oxidoreductase MT1393 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=fabG2 PE=3 SV=1 | 1 | 277 | 3.0E-06 |
| sp|Q4L8Y1|Y0585_STAHJ | Uncharacterized oxidoreductase SH0585 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH0585 PE=3 SV=1 | 3 | 235 | 4.0E-06 |
| sp|Q94KL7|SILD_FORIN | Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1 | 1 | 246 | 4.0E-06 |
| sp|Q99RF5|Y2478_STAAM | Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=3 SV=1 | 8 | 237 | 6.0E-06 |
| sp|Q7A3L9|Y2266_STAAN | Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1 | 8 | 237 | 6.0E-06 |
| sp|Q08632|SDR1_PICAB | Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1 | 5 | 234 | 7.0E-06 |
| sp|Q7FAE1|MOMAS_ORYSJ | Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1 | 7 | 231 | 8.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 65 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1508 MASSVNGKYALVTGAGSGNNLEFTKLLLENGCSVMMADLKLNAEAVALLDTYAPHAGEDTNGGRTEINGHRRPTA HFHKTDVTSWPQLSALWEATLAAFPSINIVVPGAGVFEPPSVSFWQAPKSETNPDSVSRDAADSDPGHYRLIDVN LVAPIRLSQLAIGYWTQKKDRTPGDANLVLFGSIAARIAALATPLYIASKHAIVAFARSLGALRDTVGIRVGCVA PGPVATAIFEGFEKAAEDAEMIPIHQVADAMMQLVVNDAYGDGTILQVTPGKTYVVPLYNAPPIGEADLKMPGLG AINDQVIHNLRTKGLQV* |
| Coding | >OphauB2|1508 ATGGCATCCTCAGTAAATGGAAAATATGCCCTCGTCACCGGCGCTGGGTCAGGTAATAACCTCGAGTTCACCAAG CTCTTGCTTGAAAACGGCTGTTCTGTCATGATGGCCGACCTCAAGCTCAATGCCGAGGCCGTTGCACTACTCGAT ACCTACGCACCGCACGCTGGCGAGGATACAAATGGGGGTCGCACTGAAATCAATGGCCATAGACGCCCTACGGCG CATTTCCACAAGACCGATGTGACGTCATGGCCTCAGCTCTCGGCTCTATGGGAGGCAACGCTGGCCGCTTTCCCC TCCATCAACATTGTCGTTCCTGGAGCAGGAGTATTCGAACCACCCAGTGTCAGCTTTTGGCAAGCCCCCAAATCA GAGACAAATCCAGACTCCGTGTCGCGGGATGCCGCAGACAGTGACCCAGGCCATTACCGTCTTATTGACGTCAAT CTCGTCGCTCCCATCCGGCTGAGCCAGCTGGCCATTGGATATTGGACGCAGAAAAAGGATCGCACGCCGGGCGAT GCCAATCTGGTCTTGTTTGGTAGCATTGCCGCCCGCATCGCAGCCCTTGCAACACCACTATACATTGCCTCCAAG CATGCCATAGTTGCATTTGCAAGGTCACTTGGTGCCTTGCGTGATACTGTGGGCATTCGCGTCGGCTGCGTGGCC CCGGGCCCAGTCGCAACCGCAATCTTTGAGGGCTTTGAAAAGGCAGCAGAGGATGCCGAAATGATCCCTATCCAC CAAGTGGCAGACGCCATGATGCAGCTAGTCGTCAATGACGCGTACGGCGACGGCACCATCCTTCAGGTAACTCCA GGCAAGACATATGTCGTTCCGCTATACAATGCACCTCCAATAGGTGAAGCAGATCTCAAAATGCCCGGCTTGGGG GCCATAAACGACCAGGTCATCCACAATCTTCGCACCAAAGGTCTGCAAGTGTAG |
| Transcript | >OphauB2|1508 ATGGCATCCTCAGTAAATGGAAAATATGCCCTCGTCACCGGCGCTGGGTCAGGTAATAACCTCGAGTTCACCAAG CTCTTGCTTGAAAACGGCTGTTCTGTCATGATGGCCGACCTCAAGCTCAATGCCGAGGCCGTTGCACTACTCGAT ACCTACGCACCGCACGCTGGCGAGGATACAAATGGGGGTCGCACTGAAATCAATGGCCATAGACGCCCTACGGCG CATTTCCACAAGACCGATGTGACGTCATGGCCTCAGCTCTCGGCTCTATGGGAGGCAACGCTGGCCGCTTTCCCC TCCATCAACATTGTCGTTCCTGGAGCAGGAGTATTCGAACCACCCAGTGTCAGCTTTTGGCAAGCCCCCAAATCA GAGACAAATCCAGACTCCGTGTCGCGGGATGCCGCAGACAGTGACCCAGGCCATTACCGTCTTATTGACGTCAAT CTCGTCGCTCCCATCCGGCTGAGCCAGCTGGCCATTGGATATTGGACGCAGAAAAAGGATCGCACGCCGGGCGAT GCCAATCTGGTCTTGTTTGGTAGCATTGCCGCCCGCATCGCAGCCCTTGCAACACCACTATACATTGCCTCCAAG CATGCCATAGTTGCATTTGCAAGGTCACTTGGTGCCTTGCGTGATACTGTGGGCATTCGCGTCGGCTGCGTGGCC CCGGGCCCAGTCGCAACCGCAATCTTTGAGGGCTTTGAAAAGGCAGCAGAGGATGCCGAAATGATCCCTATCCAC CAAGTGGCAGACGCCATGATGCAGCTAGTCGTCAATGACGCGTACGGCGACGGCACCATCCTTCAGGTAACTCCA GGCAAGACATATGTCGTTCCGCTATACAATGCACCTCCAATAGGTGAAGCAGATCTCAAAATGCCCGGCTTGGGG GCCATAAACGACCAGGTCATCCACAATCTTCGCACCAAAGGTCTGCAAGTGTAG |
| Gene | >OphauB2|1508 ATGGCATCCTCAGTAAATGGAAAATATGCCCTCGTCACCGGCGCTGGGTCAGGTAGCTCTCTCTATTCAACAACG GAAAAGGTCTCGTCATGGATTATTGACAAAGTCCATTCTTCTCGTTAGGTAATAACCTCGAGTTCACCAAGCTCT TGCTTGAAAACGGCTGTTCTGTCATGATGGCCGACCTCAAGCTCAATGCCGAGGCCGTTGCACTACTCGATACCT ACGCACCGCACGCTGGCGAGGATACAAATGGGGGTCGCACTGAAATCAATGGCCATAGACGCCCTACGGCGCATT TCCACAAGACCGATGTGACGTCATGGCCTCAGCTCTCGGCTCTATGGGAGGCAACGCTGGCCGCTTTCCCCTCCA TCAACATTGTCGTTCCTGGAGCAGGAGTATTCGAACCACCCAGTGTCAGCTTTTGGCAAGCCCCCAAATCAGAGA CAAATCCAGACTCCGTGTCGCGGGATGCCGCAGACAGTGACCCAGGCCATTACCGTCTTATTGACGTCAATCTCG TCGCTCCCATCCGGCTGAGCCAGCTGGCCATTGGATATTGGACGCAGAAAAAGGATCGCACGCCGGGCGATGCCA ATCTGGTCTTGTTTGGTAGCATTGCCGCCCGCATCGCAGCCCTTGCAACACCACTATACATTGCCTCCAAGCATG CCATAGTTGCATTTGCAAGGTCACTTGGTGCCTTGCGTGATACTGTGGGCATTCGCGTCGGCTGCGTGGCCCCGG GCCCAGTCGCAGTAAGATGATGACTTGAATACCGAGCAAACAATGCTCATGGGCGCTGACATTTCGACTCGTAAC CAGACCGCAATCTTTGAGGGCTTTGAAAAGGCAGCAGAGGATGCCGAAATGATCCCTATCCACCAAGTGGCAGAC GCCATGATGCAGCTAGTCGTCAATGACGCGTACGGCGACGGCACCATCCTTCAGGTAACTCCAGGCAAGACATAT GTCGTTCCGCTATACAATGCACCTCCAATAGGTGAAGCAGATCTCAAAATGCCCGGCTTGGGGGCCATAAACGAC CAGGTCATCCACAATCTTCGCACCAAAGGTCTGCAAGTGTAG |