Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|148
Gene name
Location	Contig_1:377984..379001
Strand	-
Gene length (bp)	1017
Transcript length (bp)	1017
Coding sequence length (bp)	1017
Protein length (aa)	339

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12706	Lactamase_B_2	Beta-lactamase superfamily domain	2.1E-14	66	295
PF13483	Lactamase_B_3	Beta-lactamase superfamily domain	3.8E-14	49	294

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|B5YIH1\|Y282_THEYD	UPF0173 metal-dependent hydrolase THEYE_A0282 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=THEYE_A0282 PE=3 SV=1	56	332	5.0E-08
sp\|O29003\|Y1265_ARCFU	UPF0173 metal-dependent hydrolase AF_1265 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_1265 PE=3 SV=1	50	333	1.0E-06
sp\|Q769K2\|NAPEP_RAT	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D OS=Rattus norvegicus GN=Napepld PE=1 SV=1	43	118	8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 12	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|148 MDAKHHLRFDPDNKPPLLKDQAGPQSGGRQPLGKVLCHPRGTSGVENATLTFIGTATTLIEWQGFRILTDPNFLH AGDHVHLGPGVNATRRTNPALNLHELPPVDCILLSHYHEDHFDRLVEDSLHRQFPIVTTPHAKQCLTAAEAKDEP FGQVTSLDVFESCMLHIGSGEQRAIRVTGMPGKHVPPGPLSAVNSVLKAIPPTNGWLVELGYPSTSQGLRVGYRI YISGDTLFVHELQEIPKHLGNHQIDLMLVHLGGTTIPGESMPLIMVTMDGKQGMQLVRLIDADVTIPIHFDDYDA FLSPLSDFEAEVDKAGYQHRVVYLDRGDSYRFTVGHEG*
Coding	>OphauB2\|148 ATGGACGCCAAACACCATTTGCGTTTTGATCCCGACAATAAGCCCCCCCTCCTCAAAGACCAGGCCGGGCCCCAA TCGGGAGGCAGGCAGCCATTGGGAAAGGTATTGTGTCATCCTCGCGGGACAAGTGGTGTCGAGAATGCCACCCTC ACCTTTATTGGCACCGCCACCACCTTGATCGAGTGGCAGGGCTTCCGCATCCTGACGGATCCAAACTTCCTCCAT GCTGGCGACCACGTCCACCTGGGGCCCGGCGTCAATGCGACGCGCAGGACCAATCCGGCATTGAACCTGCACGAG CTGCCGCCAGTCGACTGCATTCTGCTCTCGCATTATCACGAGGACCACTTTGACAGGCTGGTTGAGGACTCGCTG CATCGCCAGTTCCCCATAGTCACCACGCCGCATGCCAAGCAGTGCCTGACTGCAGCCGAGGCCAAGGACGAGCCG TTTGGCCAAGTGACAAGCCTCGACGTCTTTGAAAGCTGCATGTTGCATATTGGGTCGGGCGAGCAACGCGCCATC AGGGTAACGGGCATGCCAGGCAAACACGTTCCCCCCGGGCCGCTCTCTGCTGTCAACAGCGTGCTCAAGGCCATT CCGCCCACAAATGGGTGGCTGGTGGAGCTGGGCTATCCAAGCACCTCCCAAGGCTTGCGGGTTGGCTACCGCATC TACATATCTGGCGACACCTTGTTCGTCCATGAGCTCCAGGAGATCCCGAAACACCTTGGCAACCATCAAATCGAC CTGATGCTCGTCCACTTGGGCGGCACCACCATTCCGGGAGAGTCCATGCCCCTCATCATGGTGACAATGGATGGC AAGCAGGGCATGCAACTGGTCCGTCTCATTGACGCCGACGTGACGATTCCAATCCACTTTGACGACTACGACGCC TTTTTATCGCCCCTGTCCGACTTTGAAGCCGAGGTGGACAAGGCGGGCTATCAGCATCGAGTCGTCTATCTCGAT CGGGGAGACTCGTATCGCTTTACCGTTGGCCACGAGGGCTGA
Transcript	>OphauB2\|148 ATGGACGCCAAACACCATTTGCGTTTTGATCCCGACAATAAGCCCCCCCTCCTCAAAGACCAGGCCGGGCCCCAA TCGGGAGGCAGGCAGCCATTGGGAAAGGTATTGTGTCATCCTCGCGGGACAAGTGGTGTCGAGAATGCCACCCTC ACCTTTATTGGCACCGCCACCACCTTGATCGAGTGGCAGGGCTTCCGCATCCTGACGGATCCAAACTTCCTCCAT GCTGGCGACCACGTCCACCTGGGGCCCGGCGTCAATGCGACGCGCAGGACCAATCCGGCATTGAACCTGCACGAG CTGCCGCCAGTCGACTGCATTCTGCTCTCGCATTATCACGAGGACCACTTTGACAGGCTGGTTGAGGACTCGCTG CATCGCCAGTTCCCCATAGTCACCACGCCGCATGCCAAGCAGTGCCTGACTGCAGCCGAGGCCAAGGACGAGCCG TTTGGCCAAGTGACAAGCCTCGACGTCTTTGAAAGCTGCATGTTGCATATTGGGTCGGGCGAGCAACGCGCCATC AGGGTAACGGGCATGCCAGGCAAACACGTTCCCCCCGGGCCGCTCTCTGCTGTCAACAGCGTGCTCAAGGCCATT CCGCCCACAAATGGGTGGCTGGTGGAGCTGGGCTATCCAAGCACCTCCCAAGGCTTGCGGGTTGGCTACCGCATC TACATATCTGGCGACACCTTGTTCGTCCATGAGCTCCAGGAGATCCCGAAACACCTTGGCAACCATCAAATCGAC CTGATGCTCGTCCACTTGGGCGGCACCACCATTCCGGGAGAGTCCATGCCCCTCATCATGGTGACAATGGATGGC AAGCAGGGCATGCAACTGGTCCGTCTCATTGACGCCGACGTGACGATTCCAATCCACTTTGACGACTACGACGCC TTTTTATCGCCCCTGTCCGACTTTGAAGCCGAGGTGGACAAGGCGGGCTATCAGCATCGAGTCGTCTATCTCGAT CGGGGAGACTCGTATCGCTTTACCGTTGGCCACGAGGGCTGA
Gene	>OphauB2\|148 ATGGACGCCAAACACCATTTGCGTTTTGATCCCGACAATAAGCCCCCCCTCCTCAAAGACCAGGCCGGGCCCCAA TCGGGAGGCAGGCAGCCATTGGGAAAGGTATTGTGTCATCCTCGCGGGACAAGTGGTGTCGAGAATGCCACCCTC ACCTTTATTGGCACCGCCACCACCTTGATCGAGTGGCAGGGCTTCCGCATCCTGACGGATCCAAACTTCCTCCAT GCTGGCGACCACGTCCACCTGGGGCCCGGCGTCAATGCGACGCGCAGGACCAATCCGGCATTGAACCTGCACGAG CTGCCGCCAGTCGACTGCATTCTGCTCTCGCATTATCACGAGGACCACTTTGACAGGCTGGTTGAGGACTCGCTG CATCGCCAGTTCCCCATAGTCACCACGCCGCATGCCAAGCAGTGCCTGACTGCAGCCGAGGCCAAGGACGAGCCG TTTGGCCAAGTGACAAGCCTCGACGTCTTTGAAAGCTGCATGTTGCATATTGGGTCGGGCGAGCAACGCGCCATC AGGGTAACGGGCATGCCAGGCAAACACGTTCCCCCCGGGCCGCTCTCTGCTGTCAACAGCGTGCTCAAGGCCATT CCGCCCACAAATGGGTGGCTGGTGGAGCTGGGCTATCCAAGCACCTCCCAAGGCTTGCGGGTTGGCTACCGCATC TACATATCTGGCGACACCTTGTTCGTCCATGAGCTCCAGGAGATCCCGAAACACCTTGGCAACCATCAAATCGAC CTGATGCTCGTCCACTTGGGCGGCACCACCATTCCGGGAGAGTCCATGCCCCTCATCATGGTGACAATGGATGGC AAGCAGGGCATGCAACTGGTCCGTCTCATTGACGCCGACGTGACGATTCCAATCCACTTTGACGACTACGACGCC TTTTTATCGCCCCTGTCCGACTTTGAAGCCGAGGTGGACAAGGCGGGCTATCAGCATCGAGTCGTCTATCTCGAT CGGGGAGACTCGTATCGCTTTACCGTTGGCCACGAGGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail