Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1427
Gene name
LocationContig_138:40208..41952
Strand+
Gene length (bp)1744
Transcript length (bp)1227
Coding sequence length (bp)1227
Protein length (aa) 409

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.5E-29 10 341

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 5 408 1.0E-64
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 10 404 3.0E-62
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 408 1.0E-60
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 5 404 9.0E-46
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 5 353 1.0E-42
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Swissprot ID Swissprot Description Start End E-value
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 5 408 1.0E-64
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 10 404 3.0E-62
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 5 408 1.0E-60
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 5 404 9.0E-46
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 5 353 1.0E-42
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 9 385 5.0E-34
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 9 260 8.0E-34
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 6 342 1.0E-31
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 1 349 1.0E-29
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 1 366 1.0E-27
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 9 364 1.0E-26
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 1 404 2.0E-22
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 13 404 6.0E-22
sp|O13879|YE1F_SCHPO Uncharacterized transporter C1B3.15C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1B3.15c PE=3 SV=1 9 342 7.0E-20
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 12 172 6.0E-19
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 5 401 2.0E-18
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 11 206 2.0E-17
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 6 404 3.0E-17
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 18 388 1.0E-16
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 11 391 2.0E-15
sp|P0CF20|YO163_YEAST Putative uncharacterized transporter YOL163W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL163W PE=5 SV=1 42 166 3.0E-15
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 1 185 3.0E-12
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 5 201 1.0E-11
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 28 319 2.0E-11
sp|P53241|VHT1_YEAST Vitamin H transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VHT1 PE=1 SV=1 18 373 2.0E-10
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 12 172 5.0E-07
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 1 201 7.0E-07
sp|Q9MZD1|S17A5_SHEEP Sialin OS=Ovis aries GN=SLC17A5 PE=2 SV=1 10 264 7.0E-07
sp|Q0K843|SAUU_CUPNH Probable sulfoacetate transporter SauU OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=sauU PE=2 SV=1 1 278 8.0E-06
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0044425 membrane part No
GO:0006810 transport No
GO:0051234 establishment of localization No
GO:0031224 intrinsic component of membrane No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 10 28 18
2 35 57 22
3 62 84 22
4 91 113 22
5 128 150 22
6 199 221 22
7 236 258 22
8 265 287 22
9 292 314 22
10 327 346 19
11 356 378 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1427
MTNLQYKQGLAVFYATYIASELPSNLVLKRVSPRIWLPCLAMAWGIVSMCLGFVRGFASFVAVRAVLGLTEGGLL
PGMVLYLSGLYTRGELALRIGLFYTAASLSGAFGGLLARGLSAIGPRGGLEGWRWIFIIEGLMTVVAGVIAIIFL
PNSPSTARYLTPTEREWASMRLAGVGNHHSKEESFSWSEVGRGIFNVQVWLSSTAYFAILSGLYSFGLFLPTIVN
EMHIASSANTAQLWTVIPYAVATPVTVLVSLLSDRLRLRGVLMLAILPIAIAGYAVIANVGGSSSRFAMTCLMAI
GLYAAVPCVLVWNSNNSAGHYKRATTSALQLAVANCGGFVATFVYPDSEAPSYHKGHTIILGLLCYAWAAVALNI
AWCAKMNRDKRNGKFEAFRGCGDDRDPDFIMVL*
Coding >OphauB2|1427
ATGACCAACCTGCAATACAAACAAGGCCTCGCCGTCTTTTACGCCACTTATATCGCAAGCGAGCTGCCCAGCAAC
CTCGTCCTCAAGCGCGTCTCGCCGCGTATATGGCTGCCATGTCTCGCCATGGCCTGGGGCATTGTCAGCATGTGT
CTGGGCTTTGTGCGCGGCTTTGCTAGCTTTGTCGCTGTCCGCGCCGTCTTGGGCTTGACTGAAGGCGGTCTTTTG
CCTGGCATGGTGCTCTATCTGTCGGGATTGTATACCCGTGGCGAGCTGGCGCTGCGCATCGGCCTCTTTTACACG
GCTGCTTCCCTCTCGGGGGCCTTTGGCGGCTTGCTGGCCCGTGGCTTATCTGCCATTGGTCCTCGCGGGGGGCTC
GAGGGCTGGCGCTGGATCTTCATCATTGAGGGCCTCATGACAGTTGTAGCTGGCGTAATAGCCATTATCTTTTTG
CCAAACAGTCCGTCCACGGCTCGCTATCTAACCCCTACTGAGCGAGAATGGGCTTCCATGCGTCTTGCGGGCGTG
GGCAACCACCACTCCAAGGAAGAATCATTCAGCTGGTCCGAGGTTGGCCGCGGCATCTTTAATGTCCAAGTCTGG
CTCTCTTCAACAGCTTACTTTGCCATTCTCTCTGGTCTCTATTCCTTTGGCCTCTTTTTGCCCACCATTGTCAAC
GAGATGCACATTGCTTCCAGCGCCAATACCGCCCAGCTATGGACTGTGATTCCTTATGCGGTTGCCACGCCCGTG
ACTGTCCTCGTTTCCCTCCTGTCAGACCGCCTCAGACTCCGCGGCGTGCTCATGCTGGCCATTCTGCCCATTGCA
ATTGCTGGATATGCCGTCATTGCCAATGTCGGCGGCTCCTCGTCGCGCTTCGCCATGACGTGCCTCATGGCTATT
GGGCTATACGCCGCGGTGCCTTGCGTCTTGGTCTGGAACTCCAACAACTCGGCCGGACACTACAAGCGGGCAACA
ACGTCGGCTCTGCAGTTGGCCGTGGCCAATTGTGGTGGTTTTGTCGCCACCTTTGTTTACCCCGACAGTGAGGCA
CCGTCATATCACAAAGGCCACACGATTATCCTAGGACTTTTATGCTACGCATGGGCTGCAGTGGCGTTGAATATT
GCCTGGTGTGCCAAGATGAACCGCGACAAGCGCAATGGCAAGTTTGAGGCCTTTCGAGGCTGCGGAGACGACAGG
GACCCAGATTTCATCATGGTTTTGTGA
Transcript >OphauB2|1427
ATGACCAACCTGCAATACAAACAAGGCCTCGCCGTCTTTTACGCCACTTATATCGCAAGCGAGCTGCCCAGCAAC
CTCGTCCTCAAGCGCGTCTCGCCGCGTATATGGCTGCCATGTCTCGCCATGGCCTGGGGCATTGTCAGCATGTGT
CTGGGCTTTGTGCGCGGCTTTGCTAGCTTTGTCGCTGTCCGCGCCGTCTTGGGCTTGACTGAAGGCGGTCTTTTG
CCTGGCATGGTGCTCTATCTGTCGGGATTGTATACCCGTGGCGAGCTGGCGCTGCGCATCGGCCTCTTTTACACG
GCTGCTTCCCTCTCGGGGGCCTTTGGCGGCTTGCTGGCCCGTGGCTTATCTGCCATTGGTCCTCGCGGGGGGCTC
GAGGGCTGGCGCTGGATCTTCATCATTGAGGGCCTCATGACAGTTGTAGCTGGCGTAATAGCCATTATCTTTTTG
CCAAACAGTCCGTCCACGGCTCGCTATCTAACCCCTACTGAGCGAGAATGGGCTTCCATGCGTCTTGCGGGCGTG
GGCAACCACCACTCCAAGGAAGAATCATTCAGCTGGTCCGAGGTTGGCCGCGGCATCTTTAATGTCCAAGTCTGG
CTCTCTTCAACAGCTTACTTTGCCATTCTCTCTGGTCTCTATTCCTTTGGCCTCTTTTTGCCCACCATTGTCAAC
GAGATGCACATTGCTTCCAGCGCCAATACCGCCCAGCTATGGACTGTGATTCCTTATGCGGTTGCCACGCCCGTG
ACTGTCCTCGTTTCCCTCCTGTCAGACCGCCTCAGACTCCGCGGCGTGCTCATGCTGGCCATTCTGCCCATTGCA
ATTGCTGGATATGCCGTCATTGCCAATGTCGGCGGCTCCTCGTCGCGCTTCGCCATGACGTGCCTCATGGCTATT
GGGCTATACGCCGCGGTGCCTTGCGTCTTGGTCTGGAACTCCAACAACTCGGCCGGACACTACAAGCGGGCAACA
ACGTCGGCTCTGCAGTTGGCCGTGGCCAATTGTGGTGGTTTTGTCGCCACCTTTGTTTACCCCGACAGTGAGGCA
CCGTCATATCACAAAGGCCACACGATTATCCTAGGACTTTTATGCTACGCATGGGCTGCAGTGGCGTTGAATATT
GCCTGGTGTGCCAAGATGAACCGCGACAAGCGCAATGGCAAGTTTGAGGCCTTTCGAGGCTGCGGAGACGACAGG
GACCCAGATTTCATCATGGTTTTGTGA
Gene >OphauB2|1427
ATGACCAACCTGCAATACAAACAAGGCCTCGCCGTCTTTTACGCCACTTATATCGCAAGGTACACACACACACTG
CTTCCTTACTAGACCCCCCGTCCACTCACACCTCTCCTTTTGCCACCCAGCGAGCTGCCCAGCAACCTCGTCCTC
AAGCGCGTCTCGCCGCGTATATGGCTGCCATGTCTCGCCATGGCCTGGGGCATTGTCAGCATGTGTCTGGGCTTT
GTGCGCGGCTTTGCTAGCTTTGTCGCTGTCCGCGCCGTCTTGGGCTTGACTGAAGGCGGTCTTTTGCCTGGCATG
GTGCTCTATCTGTCGGGATTGTATACCCGTGGCGAGCTGGCGCTGCGCATCGGCCTCTTTTACACGGCTGCTTCC
CTCTCGGGGGCCTTTGGCGGTGAGTCGTTGTGTTTTGCAGGCTGTTGAACGTCTTGCCCGATGCTGAGATGGACT
AACGCGGCATGCAAGGCTTGCTGGCCCGTGGCTTATCTGCCATTGGTCCTCGCGGGGGGCTCGAGGGCTGGCGCT
GGATCTTCATCATTGAGGGCCTCATGGTGAGTCTTGGCCATTGACGGTGTTGCTGGACCGAGGCTGATGCCATGA
CTCAAGACAGTTGTAGCTGGCGTAATAGCCATTATCTTTTTGCCAAACAGTCCGTCCACGGCTCGCTATCTAACC
CCTACTGAGCGAGAATGGGCTTCCATGCGTCTTGCGGGCGTGGGCAACCACCACTCCAAGTATTAATAGCACTAC
CCTAGTCTCTCCTTGGCCTGGACATTGTGACTGACTGCTAGCTCAAGGGAAGAATCATTCAGCTGGTCCGAGGTT
GGCCGCGGCATCTTTAATGTCCAAGTCTGGCTCTCTTCAACAGCTTACTTTGCCATTCTCTCTGGTCTCTATTCC
TTTGGCCTCTTTGTACGGACTCGCCCCCGTCTAGTATAAACCTCCCCTCAGTCTCTATGCTAACTCGTGTCCCGC
TAGTTGCCCACCATTGTCAACGAGATGCACATTGCTTCCAGCGCCAATACCGCCCAGCTATGGACTGTGATTCCT
TATGCGGTTGCCACGCCCGTGACTGGTTAGTGTTTCAATAGAGCCTAACCGCTTGTCTTTTTCACGACAACAATG
ACTCACCATGAGCAGTCCTCGTTTCCCTCCTGTCAGACCGCCTCAGACTCCGCGGCGTGCTCATGCTGGCCATTC
TGCCCATTGCAATTGCTGGATATGCCGTCATTGCCAATGTCGGCGGCTCCTCGTCGCGCTTCGCCATGACGTGCC
TCATGGCTATTGGGCTATACGCCGCGGTGCCTTGCGTCTTGGTCTGGAACTCCAACAACTCGGCCGGACACTACA
AGCGGGCAACAACGTCGGCTCTGCAGTTGGCCGTGGCCAATTGTGGTGGTTTTGTCGCCAGTTAGTTGCTCTTGT
TTTTCCCCCTGCTTTTTTCCTCCTCCACCTTGCTGCGGCTTACCACGGATGTAGCCTTTGTTTACCCCGACAGTG
AGGCACCGTCATATCACAAAGGCCACACGATTATCCTAGGACTTTTATGCTACGCATGGGCTGCGTATGTTGTGT
TGCCATTCTCCGTCTATTGCGTCATAGTACTAACATGGTGCGACTGAATAGAGTGGCGTTGAATATTGCCTGGTG
TGCCAAGATGAACCGCGACAAGCGCAATGGCAAGTTTGAGGCCTTTCGAGGCTGCGGAGACGACAGGGACCCAGA
TTTCATCATGGTTTTGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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