© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1424 |
| Gene name | |
| Location | Contig_138:32355..34919 |
| Strand | + |
| Gene length (bp) | 2564 |
| Transcript length (bp) | 2148 |
| Coding sequence length (bp) | 2148 |
| Protein length (aa) | 716 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 3.2E-06 | 12 | 43 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P49412|PRIB_LENED | Protein priB OS=Lentinula edodes GN=priB PE=2 SV=1 | 12 | 435 | 9.0E-15 |
| sp|Q5B8L0|PRTT_EMENI | Transcriptional activator of proteases prtT OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prtT PE=3 SV=1 | 3 | 622 | 1.0E-08 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008270 | zinc ion binding | Yes |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0046914 | transition metal ion binding | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0008150 | biological_process | No |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0043167 | ion binding | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0046872 | metal ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0065007 | biological regulation | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1424 MEDASPRPKQAACLVCRRSKVKCEWTPPDRPCKRCVQLGSECVRPSFHAGRQKGIKNKRVGLDKALYQVEQAVSR ARAGDAHSAEEENALDRLRDLLAKTTDSREWPPPSDAPPSSRADTADSVHDDSPEAAPVSGFVQSNDDGLGVDDA ENPLELLARVSYIQPSRTCRRTESTRESERQQDFFTSARVSLDIGSDIDPISLGLVTDAEADGLFSFFHSKLAHT RWGLDSRIYTVSHVRSRSAFLCTSLMAAAALFMPDAAALSKRLSNHVKTLAHRVMVQRHRSVEIVLAFMVNIPWM FPGKHSTDDEACVYISLATSIAIDLSLHKIIVPLETLEQGSRLSLTRGDCLDTRAALAIDGLANIDPLSETGRLL LRGRERCWISLFVLERGMSLARGRPFMVPVTRLIKDCDNWHLSAQADPQDGHLVSMAVLRRNLEGLFDTVRSLCD GCQHSTTDGSLIAQSIQTTIERFFDQWLTEWGASIGIGPGQQLPPYVEILVTHTRLSTYGGVINHPTAPLQVGQF FRRAGLSSALNVMRAAIRGESQLASMPNNTAIMISFAACFALKLSAHTTTENSTLAPSVRKLIDETAGVLERIGT VTAHRNGLSLLYGQHLRSIVQKAAAAGTGTRREPRPCFHPDTEPAMTAMASVPPQATLMAPTQLLWSEPLQLSSM SDDQITRVLDQPGNEVESSFVGGLSWEDMHNFGWVHWPQF* |
| Coding | >OphauB2|1424 ATGGAAGATGCATCGCCGCGGCCCAAGCAGGCCGCCTGTCTGGTCTGTCGCCGCAGCAAAGTCAAGTGCGAGTGG ACGCCGCCCGACCGGCCATGTAAGCGCTGTGTCCAGCTGGGCAGCGAGTGCGTGCGCCCGAGCTTCCATGCCGGC CGACAAAAGGGCATAAAAAACAAGAGGGTCGGTCTCGACAAGGCGCTCTACCAGGTGGAGCAGGCGGTTTCACGT GCCCGCGCCGGCGACGCGCACAGTGCCGAGGAGGAGAATGCGCTCGACAGGCTGCGCGACTTGCTGGCCAAGACG ACTGACAGCCGAGAGTGGCCGCCGCCCTCTGACGCGCCCCCCAGCAGCCGCGCCGACACGGCCGACTCGGTCCAC GACGACTCGCCAGAAGCTGCCCCCGTGTCTGGCTTTGTCCAGAGCAACGACGATGGGCTTGGCGTCGACGATGCC GAGAACCCGCTCGAGCTGCTGGCTCGCGTCTCCTACATTCAGCCCTCGCGCACATGCCGCCGCACCGAGTCGACG CGCGAGTCAGAGCGCCAACAAGACTTTTTCACTTCAGCTCGCGTCAGCCTCGACATTGGCAGCGACATTGATCCC ATTTCGCTGGGGCTTGTAACCGACGCCGAGGCTGATGGTCTCTTCTCATTCTTCCACAGCAAACTGGCACATACG CGATGGGGCCTAGACTCGAGAATCTACACCGTCAGCCATGTGCGCTCGCGATCCGCCTTTCTCTGCACCTCGCTC ATGGCAGCCGCCGCTCTCTTCATGCCCGATGCAGCAGCCTTGTCGAAGCGACTCTCCAACCATGTCAAGACGTTG GCTCACCGCGTCATGGTCCAGCGGCACCGCTCCGTCGAAATCGTCTTGGCCTTCATGGTCAACATTCCATGGATG TTTCCCGGCAAGCATAGCACCGACGACGAGGCCTGCGTCTACATATCCCTCGCCACTAGCATCGCCATTGATTTA TCGCTCCACAAGATCATCGTGCCGCTTGAGACGCTCGAGCAGGGATCAAGGCTTAGTCTGACGAGGGGCGATTGC CTGGATACGAGAGCGGCTTTGGCCATTGACGGGCTTGCAAACATTGATCCCTTGTCTGAAACGGGTCGCCTACTG CTTCGCGGGCGGGAGCGGTGCTGGATATCCTTGTTTGTTCTGGAAAGAGGCATGTCGTTGGCTCGCGGCCGGCCA TTCATGGTGCCGGTAACGCGCCTCATCAAGGACTGTGACAATTGGCACCTCTCAGCCCAAGCCGACCCGCAAGAT GGGCACCTGGTCTCCATGGCGGTGCTACGACGAAATCTGGAAGGCTTATTCGACACGGTGCGGTCATTGTGCGAT GGATGTCAACATTCAACAACGGATGGGTCCTTGATTGCGCAATCCATCCAAACCACGATTGAGCGCTTCTTTGAC CAGTGGCTGACGGAATGGGGCGCGTCGATTGGCATCGGACCAGGACAACAGCTGCCCCCCTACGTTGAGATTCTC GTGACGCATACCAGACTGTCGACGTATGGAGGCGTCATCAACCACCCCACGGCTCCGCTCCAAGTGGGCCAGTTT TTCCGCAGGGCCGGTCTCTCATCAGCCCTCAACGTGATGCGGGCGGCGATTCGAGGCGAGTCGCAGCTTGCGTCC ATGCCCAACAATACTGCAATCATGATTTCCTTTGCGGCTTGCTTCGCCCTCAAGCTGAGCGCGCACACGACGACG GAGAACTCGACGCTGGCCCCGAGCGTCAGGAAACTGATTGACGAGACGGCGGGCGTGCTCGAGCGCATCGGGACC GTGACGGCGCATCGAAATGGCCTCTCCTTGCTCTATGGCCAGCACCTGCGCAGCATCGTGCAAAAGGCGGCAGCC GCGGGGACCGGGACAAGACGGGAACCTCGACCATGCTTTCACCCAGACACGGAGCCAGCAATGACGGCCATGGCG TCGGTGCCACCGCAGGCCACGCTCATGGCGCCAACGCAGCTGCTATGGTCGGAGCCGCTGCAGCTGTCGTCCATG TCGGACGACCAAATCACGCGTGTGCTGGACCAGCCGGGCAACGAGGTTGAGTCGTCGTTTGTCGGCGGTTTGTCA TGGGAGGACATGCATAATTTTGGATGGGTGCATTGGCCACAGTTTTGA |
| Transcript | >OphauB2|1424 ATGGAAGATGCATCGCCGCGGCCCAAGCAGGCCGCCTGTCTGGTCTGTCGCCGCAGCAAAGTCAAGTGCGAGTGG ACGCCGCCCGACCGGCCATGTAAGCGCTGTGTCCAGCTGGGCAGCGAGTGCGTGCGCCCGAGCTTCCATGCCGGC CGACAAAAGGGCATAAAAAACAAGAGGGTCGGTCTCGACAAGGCGCTCTACCAGGTGGAGCAGGCGGTTTCACGT GCCCGCGCCGGCGACGCGCACAGTGCCGAGGAGGAGAATGCGCTCGACAGGCTGCGCGACTTGCTGGCCAAGACG ACTGACAGCCGAGAGTGGCCGCCGCCCTCTGACGCGCCCCCCAGCAGCCGCGCCGACACGGCCGACTCGGTCCAC GACGACTCGCCAGAAGCTGCCCCCGTGTCTGGCTTTGTCCAGAGCAACGACGATGGGCTTGGCGTCGACGATGCC GAGAACCCGCTCGAGCTGCTGGCTCGCGTCTCCTACATTCAGCCCTCGCGCACATGCCGCCGCACCGAGTCGACG CGCGAGTCAGAGCGCCAACAAGACTTTTTCACTTCAGCTCGCGTCAGCCTCGACATTGGCAGCGACATTGATCCC ATTTCGCTGGGGCTTGTAACCGACGCCGAGGCTGATGGTCTCTTCTCATTCTTCCACAGCAAACTGGCACATACG CGATGGGGCCTAGACTCGAGAATCTACACCGTCAGCCATGTGCGCTCGCGATCCGCCTTTCTCTGCACCTCGCTC ATGGCAGCCGCCGCTCTCTTCATGCCCGATGCAGCAGCCTTGTCGAAGCGACTCTCCAACCATGTCAAGACGTTG GCTCACCGCGTCATGGTCCAGCGGCACCGCTCCGTCGAAATCGTCTTGGCCTTCATGGTCAACATTCCATGGATG TTTCCCGGCAAGCATAGCACCGACGACGAGGCCTGCGTCTACATATCCCTCGCCACTAGCATCGCCATTGATTTA TCGCTCCACAAGATCATCGTGCCGCTTGAGACGCTCGAGCAGGGATCAAGGCTTAGTCTGACGAGGGGCGATTGC CTGGATACGAGAGCGGCTTTGGCCATTGACGGGCTTGCAAACATTGATCCCTTGTCTGAAACGGGTCGCCTACTG CTTCGCGGGCGGGAGCGGTGCTGGATATCCTTGTTTGTTCTGGAAAGAGGCATGTCGTTGGCTCGCGGCCGGCCA TTCATGGTGCCGGTAACGCGCCTCATCAAGGACTGTGACAATTGGCACCTCTCAGCCCAAGCCGACCCGCAAGAT GGGCACCTGGTCTCCATGGCGGTGCTACGACGAAATCTGGAAGGCTTATTCGACACGGTGCGGTCATTGTGCGAT GGATGTCAACATTCAACAACGGATGGGTCCTTGATTGCGCAATCCATCCAAACCACGATTGAGCGCTTCTTTGAC CAGTGGCTGACGGAATGGGGCGCGTCGATTGGCATCGGACCAGGACAACAGCTGCCCCCCTACGTTGAGATTCTC GTGACGCATACCAGACTGTCGACGTATGGAGGCGTCATCAACCACCCCACGGCTCCGCTCCAAGTGGGCCAGTTT TTCCGCAGGGCCGGTCTCTCATCAGCCCTCAACGTGATGCGGGCGGCGATTCGAGGCGAGTCGCAGCTTGCGTCC ATGCCCAACAATACTGCAATCATGATTTCCTTTGCGGCTTGCTTCGCCCTCAAGCTGAGCGCGCACACGACGACG GAGAACTCGACGCTGGCCCCGAGCGTCAGGAAACTGATTGACGAGACGGCGGGCGTGCTCGAGCGCATCGGGACC GTGACGGCGCATCGAAATGGCCTCTCCTTGCTCTATGGCCAGCACCTGCGCAGCATCGTGCAAAAGGCGGCAGCC GCGGGGACCGGGACAAGACGGGAACCTCGACCATGCTTTCACCCAGACACGGAGCCAGCAATGACGGCCATGGCG TCGGTGCCACCGCAGGCCACGCTCATGGCGCCAACGCAGCTGCTATGGTCGGAGCCGCTGCAGCTGTCGTCCATG TCGGACGACCAAATCACGCGTGTGCTGGACCAGCCGGGCAACGAGGTTGAGTCGTCGTTTGTCGGCGGTTTGTCA TGGGAGGACATGCATAATTTTGGATGGGTGCATTGGCCACAGTTTTGA |
| Gene | >OphauB2|1424 ATGGAAGATGCATCGCCGCGGCCCAAGCAGGCCGCCTGTCTGGTCTGTCGCCGCAGCAAAGTCAAGTGCGAGTGG ACGCCGCCCGACCGGCCATGTAAGCGCTGTGTCCAGCTGGGCAGCGAGTGCGTGCGCCCGAGCTTCCATGCCGGC CGACAAAAGGGCATAAAAAAGTCTGCAGCCGTCATGCTCCGCCCTGGCATCATCTACCCCCAGCCTAGCTGTCCC AGGCAAGAAGCTGACGCCTCGCACTACACAGCAAGAGGGTCGGTCTCGACAAGGCGCTCTACCAGGTGGAGCAGG CGGTTTCACGTGCCCGCGCCGGCGACGCGCACAGTGCCGAGGAGGAGAATGCGCTCGACAGGCTGCGCGACTTGC TGGCCAAGACGACTGACAGCCGAGAGTGGCCGCCGCCCTCTGACGCGCCCCCCAGCAGCCGCGCCGACACGGCCG ACTCGGTCCACGACGACTCGCCAGAAGCTGCCCCCGTGTCTGGCTTTGTCCAGAGCAACGACGATGGGCTTGGCG TCGACGATGCCGAGAACCCGCTCGAGCTGCTGGCTCGCGTCTCCTACATTCAGCCCTCGCGCACATGCCGCCGCA CCGAGTCGACGCGCGAGTCAGAGCGCCAACAAGACTTTTTCACTTCAGCTCGCGTCAGCCTCGACATTGGCAGCG ACATTGATCCCATTTCGCTGGGGCTTGTAACCGACGCCGAGGCTGATGGTCTCTTCTCATTGTAAGCTTGCCACG AGGTAACCCAGTGCCACTCGCAAACGCTCATTTTTTTTCTCTTTTGGCTGCCCCAGCTTCCACAGCAAACTGGCA CATACGCGATGGGGCCTAGACTCGAGAATCTACACCGTCAGCCATGTGCGCTCGCGATCCGCCTTTCTCTGCACC TCGCTCATGGCAGCCGCCGCTCTCTTCATGCCCGATGCAGCAGCCTTGTCGAAGCGACTCTCCAACCATGTCAAG ACGTTGGCTCACCGCGTCATGGTCCAGCGGCACCGCTCCGTCGAAATCGTCTTGGCCTTCATGGTCAACATTCCA TGGATGTTTCCCGGCAAGCATAGCACCGACGACGAGGCCTGCGTCTACATATCCCTCGCCACTAGCATCGCCATT GATTTATCGCTCCACAAGATCATCGTGCCGCTTGAGACGCTCGAGCAGGGATCAAGGCTTAGTCTGACGAGGGGC GATTGCCTGGATACGAGAGCGGCTTTGGCCATTGACGGGCTTGCAAACATTGATCCCTTGTCTGAAACGGGTCGC CTACTGCTTCGCGGGCGGGAGCGGTGCTGGATATCCTTGTTTGTTCTGGAAAGAGGGTAGGCTGTTGGCTCTCGA GACTTGTCGCGCCGGGCTGACGAGGCCTTTGAAAAGCATGTCGTTGGCTCGCGGCCGGCCATTCATGGTGCCGGT AACGCGCCTCATCAAGGACTGTGACAATTGGCACCTCTCAGCCCAAGCCGACCCGCAAGATGGGCACCTGGTCTC CATGGCGGTGCTACGACGAAATCTGGTACGCCTTTTGCATTTTTACGACATGGCCCGTATTGCTGGCACGCACTT ACTAGTGGCACCAGGAAGGCTTATTCGACACGGTGCGGTCATTGTGCGATGGATGTCAACATTCAACAACGGATG GGTCCTTGATTGCGCAATCGTACGTATTACATCAAGACGGGCGCACCTTTTTTTTTTTTTTACTTTTACTCCCAG GGCGAAGAAGCTGCTGACGTGTGACGGGCAGCATCCAAACCACGATTGAGCGCTTCTTTGACCAGTGGCTGACGG AATGGGGCGCGTCGATTGGCATCGGACCAGGTCTGTTGCACTGCAAAAATGCGGCAGCCCAGGGCAGGACTGACG CTGGCACAGGACAACAGCTGCCCCCCTACGTTGAGATTCTCGTGACGCATACCAGACTGTCGACGTATGGAGGCG TCATCAACCACCCCACGGCTCCGCTCCAAGTGGGCCAGTTTTTCCGCAGGGCCGGTCTCTCATCAGCCCTCAACG TGATGCGGGCGGCGATTCGAGGCGAGTCGCAGCTTGCGTCCATGCCCAACAATACTGCAATCATGATTTCCTTTG CGGCTTGCTTCGCCCTCAAGCTGAGCGCGCACACGACGACGGAGAACTCGACGCTGGCCCCGAGCGTCAGGAAAC TGATTGACGAGACGGCGGGCGTGCTCGAGCGCATCGGGACCGTGACGGCGCATCGAAATGGCCTCTCCTTGCTCT ATGGCCAGCACCTGCGCAGCATCGTGCAAAAGGCGGCAGCCGCGGGGACCGGGACAAGACGGGAACCTCGACCAT GCTTTCACCCAGACACGGAGCCAGCAATGACGGCCATGGCGTCGGTGCCACCGCAGGCCACGCTCATGGCGCCAA CGCAGCTGCTATGGTCGGAGCCGCTGCAGCTGTCGTCCATGTCGGACGACCAAATCACGCGTGTGCTGGACCAGC CGGGCAACGAGGTTGAGTCGTCGTTTGTCGGCGGTTTGTCATGGGAGGACATGCATAATTTTGGATGGGTGCATT GGCCACAGTTTTGA |