Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1416
Gene name
LocationContig_137:47129..47760
Strand-
Gene length (bp)631
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19271 Nis1 Nis1 family 4.9E-36 16 128

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1416
MRFSLVAMASGLAALANARINGIAVPDTIRPGEGFNAIIKSSNYIQTVFDVAIVFGYHQGPDFPPSLGSLADSLC
LGAEQSNQLNDFKKWVFIPSSAPKGPGTVTASLMSLYGASHTPVLASYSVNVTFGDFTSNNYVTSQP*
Coding >OphauB2|1416
ATGCGCTTCTCCCTCGTCGCCATGGCGTCGGGCCTCGCTGCCCTGGCAAATGCTCGCATCAACGGCATTGCCGTC
CCAGACACGATTCGCCCCGGCGAGGGCTTCAATGCAATCATCAAGAGCTCAAATTACATACAGACAGTCTTTGAT
GTGGCCATTGTCTTTGGCTACCACCAGGGCCCCGACTTTCCCCCCTCGCTCGGTTCGCTCGCAGACTCTCTCTGC
CTCGGCGCAGAACAATCCAATCAGCTCAACGACTTTAAGAAATGGGTCTTTATCCCCTCGTCAGCTCCCAAGGGC
CCCGGCACCGTCACCGCCAGTCTCATGAGCCTCTACGGCGCCTCCCACACCCCCGTCCTCGCCAGCTACTCGGTA
AACGTCACCTTTGGCGACTTTACCAGCAACAACTACGTTACCAGCCAGCCATGA
Transcript >OphauB2|1416
ATGCGCTTCTCCCTCGTCGCCATGGCGTCGGGCCTCGCTGCCCTGGCAAATGCTCGCATCAACGGCATTGCCGTC
CCAGACACGATTCGCCCCGGCGAGGGCTTCAATGCAATCATCAAGAGCTCAAATTACATACAGACAGTCTTTGAT
GTGGCCATTGTCTTTGGCTACCACCAGGGCCCCGACTTTCCCCCCTCGCTCGGTTCGCTCGCAGACTCTCTCTGC
CTCGGCGCAGAACAATCCAATCAGCTCAACGACTTTAAGAAATGGGTCTTTATCCCCTCGTCAGCTCCCAAGGGC
CCCGGCACCGTCACCGCCAGTCTCATGAGCCTCTACGGCGCCTCCCACACCCCCGTCCTCGCCAGCTACTCGGTA
AACGTCACCTTTGGCGACTTTACCAGCAACAACTACGTTACCAGCCAGCCATGA
Gene >OphauB2|1416
ATGCGCTTCTCCCTCGTCGCCATGGCGTCGGGCCTCGCTGCCCTGGCAAATGCTCGCATCAACGGCATTGCCGTC
CCAGACACGATTCGCCCCGGCGAGGGCTTCAATGCAATCATCAAGAGCTCAAATTACATACAGACAGTCTTTGAT
GTGGCCATTGTCTTTGGCTACCACCAGGGCCCCGACTTTCCCCCCTCGCTCGGTTCGCTCGCAGACTCTCTCTGC
CTCGGCGCAGGTACTGCTCTCCTTGTTTTCTCTCTCTTTTTCTTGCACCCCTTCCATCTCGTGTAATATCTAGTC
TTTAATCTATTCTCTTCTCCCGCCTTGCCACTCTCTTCCATCTCTTTGCTCATTATATTCTTACATTTCCCTACA
TGTCCCTCTCTTCACCCTACTCTCCAATATATACAATAGCCACTGCTGACACAAAATGTCAGAACAATCCAATCA
GCTCAACGACTTTAAGAAATGGGTCTTTATCCCCTCGTCAGCTCCCAAGGGCCCCGGCACCGTCACCGCCAGTCT
CATGAGCCTCTACGGCGCCTCCCACACCCCCGTCCTCGCCAGCTACTCGGTAAACGTCACCTTTGGCGACTTTAC
CAGCAACAACTACGTTACCAGCCAGCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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