Fungal Genomics

at Utrecht University

General Properties

Protein IDOphauB2|1411
Gene name
LocationContig_137:37081..37559
Strand+
Gene length (bp)478
Transcript length (bp)405
Coding sequence length (bp)405
Protein length (aa) 135

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09044 Kp4 Kp4 5.4E-32 4 122

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q90121|KP4T_UMV4 KP4 killer toxin OS=Ustilago maydis P4 virus GN=M2A PE=1 SV=1 1 122 3.0E-14

GO

GO Term Description Terminal node
GO:0005576 extracellular region Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >OphauB2|1411
MVSLALVASLIATASALGINCRGSGACNINDASLSDVLTQVRQIQARGQGGHYYSTGVQLACAQGKYASICAFYQ
SGASGTADRAAELLQGLINHKCTQCGSIPTQPGNDVSKGELTVNIVSRPCCHGTCQCPI*
Coding >OphauB2|1411
ATGGTGTCTCTTGCCTTGGTTGCTAGCCTCATCGCCACTGCGTCCGCGCTGGGCATCAATTGCCGCGGCTCAGGC
GCTTGCAATATCAATGATGCTAGTCTCTCAGATGTCTTGACCCAGGTGCGGCAGATACAAGCTCGAGGCCAGGGC
GGGCATTATTATAGTACTGGAGTTCAATTGGCTTGCGCACAGGGCAAATATGCTTCCATTTGTGCCTTTTATCAG
AGCGGGGCTAGTGGCACCGCAGATCGCGCTGCCGAGCTTCTTCAGGGCCTGATAAACCACAAGTGCACACAGTGT
GGCAGCATTCCGACACAGCCTGGCAATGATGTCAGCAAGGGCGAGTTGACGGTTAATATCGTGAGCCGGCCTTGC
TGTCACGGCACCTGCCAGTGTCCCATCTGA
Transcript >OphauB2|1411
ATGGTGTCTCTTGCCTTGGTTGCTAGCCTCATCGCCACTGCGTCCGCGCTGGGCATCAATTGCCGCGGCTCAGGC
GCTTGCAATATCAATGATGCTAGTCTCTCAGATGTCTTGACCCAGGTGCGGCAGATACAAGCTCGAGGCCAGGGC
GGGCATTATTATAGTACTGGAGTTCAATTGGCTTGCGCACAGGGCAAATATGCTTCCATTTGTGCCTTTTATCAG
AGCGGGGCTAGTGGCACCGCAGATCGCGCTGCCGAGCTTCTTCAGGGCCTGATAAACCACAAGTGCACACAGTGT
GGCAGCATTCCGACACAGCCTGGCAATGATGTCAGCAAGGGCGAGTTGACGGTTAATATCGTGAGCCGGCCTTGC
TGTCACGGCACCTGCCAGTGTCCCATCTGA
Gene >OphauB2|1411
ATGGTGTCTCTTGCCTTGGTTGCTAGCCTCATCGCCACTGCGTCCGCGCTGGGCATCAATTGCCGCGGCTCAGGC
GCTTGCAATATCAATGATGCTAGTCTCTCAGATGTCTTGACCCAGGTGCGGCAGATACAAGCTCGAGGCCAGGGC
GGGCATTATTATAGTACTGGAGGTAAGGCAGGAGATGCTTGAGGCGTGCTCGCTTGCGTTGCAGGGAGTTTATCT
TTGCTGATTCGCTTGGCCAGTTCAATTGGCTTGCGCACAGGGCAAATATGCTTCCATTTGTGCCTTTTATCAGAG
CGGGGCTAGTGGCACCGCAGATCGCGCTGCCGAGCTTCTTCAGGGCCTGATAAACCACAAGTGCACACAGTGTGG
CAGCATTCCGACACAGCCTGGCAATGATGTCAGCAAGGGCGAGTTGACGGTTAATATCGTGAGCCGGCCTTGCTG
TCACGGCACCTGCCAGTGTCCCATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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