Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|1392
Gene name
Location	Contig_136:34640..35163
Strand	-
Gene length (bp)	523
Transcript length (bp)	459
Coding sequence length (bp)	459
Protein length (aa)	153

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16541	AltA1	Alternaria alternata allergen 1	6.2E-16	29	132

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|1392 MRAFALGSLVALMTVPSAAQAPQREEIKISEFYVREDESEGDRVVHNVGFKLTGRDATDLSCSTTNPVFPRPTQA ATCGNSKYRFSLHPGTDNSDFALMIYHEMGTGVSLWGQGNVPSICRAGGAGQDDYVCNQVGGPTTIVIDSTLPPV DH*
Coding	>OphauB2\|1392 ATGCGCGCCTTTGCCCTTGGCAGCCTCGTTGCCCTGATGACGGTCCCTTCGGCCGCGCAAGCTCCGCAGCGTGAG GAAATCAAAATCTCCGAATTTTATGTGCGCGAGGACGAGTCCGAAGGCGACAGGGTGGTGCACAATGTCGGCTTC AAGCTCACTGGGCGCGACGCGACCGACTTGTCGTGCTCCACGACGAACCCAGTGTTTCCCCGTCCGACTCAAGCG GCCACGTGTGGCAATTCCAAGTATCGTTTCTCGCTGCACCCGGGCACCGACAACTCGGACTTTGCCCTCATGATC TACCACGAGATGGGCACGGGTGTCAGCCTATGGGGCCAGGGCAATGTGCCCTCGATATGCCGCGCAGGCGGTGCT GGGCAGGACGACTATGTCTGCAACCAGGTCGGCGGACCAACCACCATTGTTATTGACAGCACGCTTCCCCCAGTT GACCACTAG
Transcript	>OphauB2\|1392 ATGCGCGCCTTTGCCCTTGGCAGCCTCGTTGCCCTGATGACGGTCCCTTCGGCCGCGCAAGCTCCGCAGCGTGAG GAAATCAAAATCTCCGAATTTTATGTGCGCGAGGACGAGTCCGAAGGCGACAGGGTGGTGCACAATGTCGGCTTC AAGCTCACTGGGCGCGACGCGACCGACTTGTCGTGCTCCACGACGAACCCAGTGTTTCCCCGTCCGACTCAAGCG GCCACGTGTGGCAATTCCAAGTATCGTTTCTCGCTGCACCCGGGCACCGACAACTCGGACTTTGCCCTCATGATC TACCACGAGATGGGCACGGGTGTCAGCCTATGGGGCCAGGGCAATGTGCCCTCGATATGCCGCGCAGGCGGTGCT GGGCAGGACGACTATGTCTGCAACCAGGTCGGCGGACCAACCACCATTGTTATTGACAGCACGCTTCCCCCAGTT GACCACTAG
Gene	>OphauB2\|1392 ATGCGCGCCTTTGCCCTTGGCAGCCTCGTTGCCCTGATGACGGTCCCTTCGGCCGCGCAAGCTCCGCAGCGTGAG GAAATCAAAATCTCCGAATTTTATGTGCGCGAGGACGAGTCCGAAGGCGACAGGGTGGTGCACAATGTCGGCTTC AAGCTCACTGGGCGCGACGCGACCGACTTGTCGTGCTCCACGACGAACCCAGTGTTTCCCCGTCCGACTCAAGCG GCCACGTGTGGCAATTCCAAGTATCGTTTCTCGCTGCACCCGGGCACCGACAACTCGGACTTTGCCCTCATGATC TACCACGAGATGGGCACGGGGTAAGTCTTGAGTATCGTGCTTTTTGTTTGCGCGTGGAAACATGCTAACACTGGT GCCTTTTAGTGTCAGCCTATGGGGCCAGGGCAATGTGCCCTCGATATGCCGCGCAGGCGGTGCTGGGCAGGACGA CTATGTCTGCAACCAGGTCGGCGGACCAACCACCATTGTTATTGACAGCACGCTTCCCCCAGTTGACCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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