© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | OphauB2|1360 |
| Gene name | |
| Location | Contig_134:32208..34014 |
| Strand | - |
| Gene length (bp) | 1806 |
| Transcript length (bp) | 1704 |
| Coding sequence length (bp) | 1704 |
| Protein length (aa) | 568 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02112 | PDEase_II | cAMP phosphodiesterases class-II | 3.4E-44 | 99 | 380 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32782|PDE1_CANAX | 3',5'-cyclic-nucleotide phosphodiesterase OS=Candida albicans GN=PDE1 PE=3 SV=2 | 12 | 388 | 3.0E-20 |
| sp|P36599|PDE1_SCHPO | 3',5'-cyclic-nucleotide phosphodiesterase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgs2 PE=3 SV=1 | 17 | 175 | 1.0E-16 |
| sp|P22434|PDE1_YEAST | 3',5'-cyclic-nucleotide phosphodiesterase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDE1 PE=1 SV=2 | 11 | 166 | 5.0E-15 |
| sp|Q8ZD92|CPDP_YERPE | Probable 3',5'-cyclic-nucleotide phosphodiesterase OS=Yersinia pestis GN=cpdP PE=3 SV=1 | 12 | 192 | 2.0E-13 |
| sp|Q56686|CPDP_ALIFS | 3',5'-cyclic-nucleotide phosphodiesterase OS=Aliivibrio fischeri GN=cpdP PE=3 SV=1 | 12 | 175 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P32782|PDE1_CANAX | 3',5'-cyclic-nucleotide phosphodiesterase OS=Candida albicans GN=PDE1 PE=3 SV=2 | 12 | 388 | 3.0E-20 |
| sp|P36599|PDE1_SCHPO | 3',5'-cyclic-nucleotide phosphodiesterase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgs2 PE=3 SV=1 | 17 | 175 | 1.0E-16 |
| sp|P22434|PDE1_YEAST | 3',5'-cyclic-nucleotide phosphodiesterase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDE1 PE=1 SV=2 | 11 | 166 | 5.0E-15 |
| sp|Q8ZD92|CPDP_YERPE | Probable 3',5'-cyclic-nucleotide phosphodiesterase OS=Yersinia pestis GN=cpdP PE=3 SV=1 | 12 | 192 | 2.0E-13 |
| sp|Q56686|CPDP_ALIFS | 3',5'-cyclic-nucleotide phosphodiesterase OS=Aliivibrio fischeri GN=cpdP PE=3 SV=1 | 12 | 175 | 3.0E-10 |
| sp|P36599|PDE1_SCHPO | 3',5'-cyclic-nucleotide phosphodiesterase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgs2 PE=3 SV=1 | 293 | 383 | 5.0E-09 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004115 | 3',5'-cyclic-AMP phosphodiesterase activity | Yes |
| GO:0006198 | cAMP catabolic process | Yes |
| GO:1901565 | organonitrogen compound catabolic process | No |
| GO:0009214 | cyclic nucleotide catabolic process | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0009259 | ribonucleotide metabolic process | No |
| GO:0009154 | purine ribonucleotide catabolic process | No |
| GO:0034655 | nucleobase-containing compound catabolic process | No |
| GO:0009166 | nucleotide catabolic process | No |
| GO:0009187 | cyclic nucleotide metabolic process | No |
| GO:0046700 | heterocycle catabolic process | No |
| GO:0009150 | purine ribonucleotide metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:1901361 | organic cyclic compound catabolic process | No |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0019693 | ribose phosphate metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046058 | cAMP metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:1901292 | nucleoside phosphate catabolic process | No |
| GO:0072523 | purine-containing compound catabolic process | No |
| GO:0009261 | ribonucleotide catabolic process | No |
| GO:1901136 | carbohydrate derivative catabolic process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0004112 | cyclic-nucleotide phosphodiesterase activity | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0046434 | organophosphate catabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:0019439 | aromatic compound catabolic process | No |
| GO:0072521 | purine-containing compound metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0006163 | purine nucleotide metabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0006195 | purine nucleotide catabolic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0044248 | cellular catabolic process | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0044270 | cellular nitrogen compound catabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008081 | phosphoric diester hydrolase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >OphauB2|1360 MGHADHHDAPVLHVVVLGAGGGPQESNITAMLVRSVSQHWAKGSVVAVDAGIHLSAIARLIGESSSPRSSPQSQD DDVPPRLAHGPLQGLPLPCRSVEANAAHVVRTLVDTYLITHPHLDHISGLVVNTAGLSASRPKKIAGLPSTIQAL KNHIFNNIIWPNLSDENNGAGLLTYLRLVEGGSPALGHGSSRGYVEVCDGLLVKAWSVSHGHCIERHAHRGSASA ASASFSCPSPRYGSHDGSAATQPQPPHGRASMLGSGAATGASGAGGASPQIYGAGSMMEQERYCVYDSSAYFIQD HQHRREVLIFGDVEPDSISLHPRNLAVWQEAAPKIAAGLLTAIFIECSYDDSQSNDRLFGHLKPVFVIQELHVLA AEVEAARVAAVAAAAAAAAATADSGSASDTASTRKRKRTSLGAGSGAENRRPSVPIRRQSAAATVHFQDPFAPKP LGQPSCPSPNKLPSFATPPPPPPQAAPGAAAPANGTVQVATPTKEDEVAHVEPAAIETPAMRPLQGLKVVIIHVK EKLTDEEPAIGERIMEQLNEHERTAQLGCEFVVSYPGQSFYL* |
| Coding | >OphauB2|1360 ATGGGCCATGCCGACCACCATGACGCCCCCGTCTTGCACGTTGTTGTGCTGGGCGCTGGCGGCGGCCCTCAGGAA TCCAACATAACCGCCATGCTGGTGCGCTCCGTCTCCCAGCACTGGGCCAAGGGTTCCGTTGTCGCCGTCGATGCC GGCATCCACCTGTCCGCCATTGCCCGCTTGATAGGAGAATCGTCATCCCCGCGCTCTTCGCCTCAGTCGCAAGAC GACGACGTGCCGCCCCGATTAGCCCACGGGCCTTTGCAAGGCTTGCCATTGCCTTGCCGCTCCGTCGAGGCCAAT GCAGCCCACGTTGTGCGCACGCTTGTCGACACCTATCTCATTACCCATCCTCACCTCGACCACATCTCGGGCCTC GTGGTCAACACAGCTGGCCTGTCGGCCTCGCGTCCCAAGAAGATTGCCGGCCTGCCCTCTACCATTCAAGCACTC AAGAACCACATCTTCAACAACATCATTTGGCCTAATCTTAGCGACGAGAACAACGGCGCCGGCCTGTTGACGTAT CTGCGTCTTGTCGAGGGCGGCAGTCCGGCTCTCGGCCATGGCTCTAGCAGGGGCTACGTCGAAGTATGTGACGGC TTGCTCGTCAAGGCCTGGAGCGTCAGCCACGGCCACTGCATCGAGCGACATGCCCATCGTGGCTCTGCCTCGGCT GCCTCGGCCTCGTTTTCCTGTCCATCGCCGCGCTACGGCAGCCACGATGGGTCTGCTGCCACTCAGCCCCAGCCG CCTCATGGGCGTGCCTCGATGCTCGGGAGTGGAGCTGCCACTGGTGCGTCGGGTGCTGGCGGAGCATCTCCGCAA ATCTATGGCGCCGGCTCCATGATGGAACAGGAGCGCTACTGCGTCTACGACTCCAGCGCCTATTTTATCCAGGAC CACCAGCACCGCCGCGAAGTGCTCATTTTTGGCGATGTTGAGCCGGATAGCATCTCGCTGCATCCGCGAAATTTA GCCGTCTGGCAAGAAGCGGCGCCCAAGATTGCTGCTGGTCTGCTTACTGCCATTTTTATTGAATGCAGCTACGAC GACTCTCAGAGCAACGACCGCTTGTTTGGTCATTTGAAACCCGTCTTTGTCATTCAGGAGCTGCATGTGCTGGCT GCAGAAGTCGAGGCAGCTCGTGTTGCTGCTGTTGCTGCTGCCGCTGCTGCCGCCGCCGCCACAGCTGACTCGGGT AGCGCCTCTGATACAGCATCGACGCGCAAACGCAAGCGCACCAGTTTAGGAGCTGGCAGTGGCGCGGAAAATAGA CGCCCGTCGGTGCCTATTCGCAGGCAAAGCGCCGCAGCCACGGTGCACTTTCAGGACCCCTTTGCGCCCAAGCCT CTTGGTCAGCCGTCTTGTCCGTCGCCCAACAAGCTGCCGTCGTTTGCCACGCCGCCTCCGCCACCTCCCCAGGCC GCTCCAGGGGCAGCGGCGCCAGCCAATGGGACGGTGCAAGTCGCCACGCCAACAAAGGAAGACGAGGTGGCGCAT GTGGAGCCTGCGGCTATTGAAACACCAGCCATGCGTCCGCTGCAGGGTCTCAAGGTGGTGATTATACACGTCAAG GAAAAGCTGACGGACGAGGAGCCGGCAATTGGCGAGCGCATCATGGAGCAACTAAACGAACACGAACGGACGGCG CAGCTTGGATGCGAGTTTGTCGTGTCGTATCCGGGACAGAGTTTCTATCTCTGA |
| Transcript | >OphauB2|1360 ATGGGCCATGCCGACCACCATGACGCCCCCGTCTTGCACGTTGTTGTGCTGGGCGCTGGCGGCGGCCCTCAGGAA TCCAACATAACCGCCATGCTGGTGCGCTCCGTCTCCCAGCACTGGGCCAAGGGTTCCGTTGTCGCCGTCGATGCC GGCATCCACCTGTCCGCCATTGCCCGCTTGATAGGAGAATCGTCATCCCCGCGCTCTTCGCCTCAGTCGCAAGAC GACGACGTGCCGCCCCGATTAGCCCACGGGCCTTTGCAAGGCTTGCCATTGCCTTGCCGCTCCGTCGAGGCCAAT GCAGCCCACGTTGTGCGCACGCTTGTCGACACCTATCTCATTACCCATCCTCACCTCGACCACATCTCGGGCCTC GTGGTCAACACAGCTGGCCTGTCGGCCTCGCGTCCCAAGAAGATTGCCGGCCTGCCCTCTACCATTCAAGCACTC AAGAACCACATCTTCAACAACATCATTTGGCCTAATCTTAGCGACGAGAACAACGGCGCCGGCCTGTTGACGTAT CTGCGTCTTGTCGAGGGCGGCAGTCCGGCTCTCGGCCATGGCTCTAGCAGGGGCTACGTCGAAGTATGTGACGGC TTGCTCGTCAAGGCCTGGAGCGTCAGCCACGGCCACTGCATCGAGCGACATGCCCATCGTGGCTCTGCCTCGGCT GCCTCGGCCTCGTTTTCCTGTCCATCGCCGCGCTACGGCAGCCACGATGGGTCTGCTGCCACTCAGCCCCAGCCG CCTCATGGGCGTGCCTCGATGCTCGGGAGTGGAGCTGCCACTGGTGCGTCGGGTGCTGGCGGAGCATCTCCGCAA ATCTATGGCGCCGGCTCCATGATGGAACAGGAGCGCTACTGCGTCTACGACTCCAGCGCCTATTTTATCCAGGAC CACCAGCACCGCCGCGAAGTGCTCATTTTTGGCGATGTTGAGCCGGATAGCATCTCGCTGCATCCGCGAAATTTA GCCGTCTGGCAAGAAGCGGCGCCCAAGATTGCTGCTGGTCTGCTTACTGCCATTTTTATTGAATGCAGCTACGAC GACTCTCAGAGCAACGACCGCTTGTTTGGTCATTTGAAACCCGTCTTTGTCATTCAGGAGCTGCATGTGCTGGCT GCAGAAGTCGAGGCAGCTCGTGTTGCTGCTGTTGCTGCTGCCGCTGCTGCCGCCGCCGCCACAGCTGACTCGGGT AGCGCCTCTGATACAGCATCGACGCGCAAACGCAAGCGCACCAGTTTAGGAGCTGGCAGTGGCGCGGAAAATAGA CGCCCGTCGGTGCCTATTCGCAGGCAAAGCGCCGCAGCCACGGTGCACTTTCAGGACCCCTTTGCGCCCAAGCCT CTTGGTCAGCCGTCTTGTCCGTCGCCCAACAAGCTGCCGTCGTTTGCCACGCCGCCTCCGCCACCTCCCCAGGCC GCTCCAGGGGCAGCGGCGCCAGCCAATGGGACGGTGCAAGTCGCCACGCCAACAAAGGAAGACGAGGTGGCGCAT GTGGAGCCTGCGGCTATTGAAACACCAGCCATGCGTCCGCTGCAGGGTCTCAAGGTGGTGATTATACACGTCAAG GAAAAGCTGACGGACGAGGAGCCGGCAATTGGCGAGCGCATCATGGAGCAACTAAACGAACACGAACGGACGGCG CAGCTTGGATGCGAGTTTGTCGTGTCGTATCCGGGACAGAGTTTCTATCTCTGA |
| Gene | >OphauB2|1360 ATGGGCCATGCCGACCACCATGACGCCCCCGTCTTGCACGTTGTTGTGCTGGTGAGTAGCCTGCTGCTTTTTGCC TGCCTTGGAGGCCTGCCTTGACGGCCTGCCTTGACCGTCTGCCTCTTGTTGCCTCTTGGCTAACGAGCTTGTCTT TAGGGCGCTGGCGGCGGCCCTCAGGAATCCAACATAACCGCCATGCTGGTGCGCTCCGTCTCCCAGCACTGGGCC AAGGGTTCCGTTGTCGCCGTCGATGCCGGCATCCACCTGTCCGCCATTGCCCGCTTGATAGGAGAATCGTCATCC CCGCGCTCTTCGCCTCAGTCGCAAGACGACGACGTGCCGCCCCGATTAGCCCACGGGCCTTTGCAAGGCTTGCCA TTGCCTTGCCGCTCCGTCGAGGCCAATGCAGCCCACGTTGTGCGCACGCTTGTCGACACCTATCTCATTACCCAT CCTCACCTCGACCACATCTCGGGCCTCGTGGTCAACACAGCTGGCCTGTCGGCCTCGCGTCCCAAGAAGATTGCC GGCCTGCCCTCTACCATTCAAGCACTCAAGAACCACATCTTCAACAACATCATTTGGCCTAATCTTAGCGACGAG AACAACGGCGCCGGCCTGTTGACGTATCTGCGTCTTGTCGAGGGCGGCAGTCCGGCTCTCGGCCATGGCTCTAGC AGGGGCTACGTCGAAGTATGTGACGGCTTGCTCGTCAAGGCCTGGAGCGTCAGCCACGGCCACTGCATCGAGCGA CATGCCCATCGTGGCTCTGCCTCGGCTGCCTCGGCCTCGTTTTCCTGTCCATCGCCGCGCTACGGCAGCCACGAT GGGTCTGCTGCCACTCAGCCCCAGCCGCCTCATGGGCGTGCCTCGATGCTCGGGAGTGGAGCTGCCACTGGTGCG TCGGGTGCTGGCGGAGCATCTCCGCAAATCTATGGCGCCGGCTCCATGATGGAACAGGAGCGCTACTGCGTCTAC GACTCCAGCGCCTATTTTATCCAGGACCACCAGCACCGCCGCGAAGTGCTCATTTTTGGCGATGTTGAGCCGGAT AGCATCTCGCTGCATCCGCGAAATTTAGCCGTCTGGCAAGAAGCGGCGCCCAAGATTGCTGCTGGTCTGCTTACT GCCATTTTTATTGAATGCAGCTACGACGACTCTCAGAGCAACGACCGCTTGTTTGGTCATTTGAAACCCGTCTTT GTCATTCAGGAGCTGCATGTGCTGGCTGCAGAAGTCGAGGCAGCTCGTGTTGCTGCTGTTGCTGCTGCCGCTGCT GCCGCCGCCGCCACAGCTGACTCGGGTAGCGCCTCTGATACAGCATCGACGCGCAAACGCAAGCGCACCAGTTTA GGAGCTGGCAGTGGCGCGGAAAATAGACGCCCGTCGGTGCCTATTCGCAGGCAAAGCGCCGCAGCCACGGTGCAC TTTCAGGACCCCTTTGCGCCCAAGCCTCTTGGTCAGCCGTCTTGTCCGTCGCCCAACAAGCTGCCGTCGTTTGCC ACGCCGCCTCCGCCACCTCCCCAGGCCGCTCCAGGGGCAGCGGCGCCAGCCAATGGGACGGTGCAAGTCGCCACG CCAACAAAGGAAGACGAGGTGGCGCATGTGGAGCCTGCGGCTATTGAAACACCAGCCATGCGTCCGCTGCAGGGT CTCAAGGTGGTGATTATACACGTCAAGGAAAAGCTGACGGACGAGGAGCCGGCAATTGGCGAGCGCATCATGGAG CAACTAAACGAACACGAACGGACGGCGCAGCTTGGATGCGAGTTTGTCGTGTCGTATCCGGGACAGAGTTTCTAT CTCTGA |