Fungal Genomics

at Utrecht University

General Properties

Protein ID	OphauB2\|1351
Gene name
Location	Contig_134:2518..3463
Strand	-
Gene length (bp)	945
Transcript length (bp)	744
Coding sequence length (bp)	744
Protein length (aa)	248

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03980	Nnf1	Nnf1	7.9E-23	53	157

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P47149\|NNF1_YEAST	Kinetochore-associated protein NNF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NNF1 PE=1 SV=3	14	150	2.0E-09

GO

GO Term	Description	Terminal node
GO:0000818	nuclear MIS12/MIND complex	Yes
GO:0032991	protein-containing complex	No
GO:0000444	MIS12/MIND type complex	No
GO:0140513	nuclear protein-containing complex	No
GO:0005575	cellular_component	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 14	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>OphauB2\|1351 MPTPDPEPSAPLPGPRATRLAETFNHALLRTLQRVSNPSGFAACFATIDAPDVLRVVQEQMVKLLSDKCQKEFQR IMDSRDLVSKLNEFEALVAAAAARRAQAGDAPPPTPPHVLSAETIIAAHSHAALDPILSSTTLRLAQRRAQNARL VDCLAQQTAAMDALFARLDEAKADVVAAAQALDAANDGLSCVAIGHGVAGAAAAAAAHHGNAPGASAATDATASA AHSLDSPKDPPDAADTADTALS*
Coding	>OphauB2\|1351 ATGCCAACCCCCGACCCCGAACCCTCGGCCCCCCTCCCCGGCCCGCGCGCCACCCGCCTCGCCGAAACGTTTAAC CACGCCCTCTTGCGCACCCTGCAGCGCGTCAGCAATCCATCTGGCTTTGCTGCTTGTTTTGCCACGATTGATGCG CCAGATGTGCTGCGCGTGGTGCAGGAGCAAATGGTGAAGCTGCTGAGTGACAAGTGTCAGAAGGAATTTCAGCGC ATCATGGATAGTCGCGACCTTGTTTCCAAACTAAACGAATTCGAAGCCCTCGTTGCCGCCGCCGCCGCCCGCCGC GCCCAAGCCGGCGACGCTCCTCCTCCCACGCCCCCTCATGTCCTATCGGCCGAAACAATCATTGCCGCCCACTCC CACGCCGCCCTTGACCCAATCCTCTCCTCCACCACTCTGCGCCTCGCCCAGCGCCGCGCCCAAAACGCCCGTCTG GTGGATTGCCTCGCTCAGCAGACGGCTGCCATGGACGCCCTTTTTGCTCGCCTTGACGAGGCCAAGGCAGACGTG GTGGCTGCGGCGCAGGCTCTCGACGCGGCTAATGATGGCTTGTCTTGTGTGGCCATTGGTCATGGCGTGGCTGGC GCTGCTGCTGCTGCTGCTGCTCATCATGGCAATGCGCCTGGTGCTTCCGCCGCCACTGACGCGACCGCTTCAGCT GCTCACTCCCTCGATTCACCCAAAGACCCTCCCGATGCTGCAGACACTGCAGACACTGCCCTCTCATAG
Transcript	>OphauB2\|1351 ATGCCAACCCCCGACCCCGAACCCTCGGCCCCCCTCCCCGGCCCGCGCGCCACCCGCCTCGCCGAAACGTTTAAC CACGCCCTCTTGCGCACCCTGCAGCGCGTCAGCAATCCATCTGGCTTTGCTGCTTGTTTTGCCACGATTGATGCG CCAGATGTGCTGCGCGTGGTGCAGGAGCAAATGGTGAAGCTGCTGAGTGACAAGTGTCAGAAGGAATTTCAGCGC ATCATGGATAGTCGCGACCTTGTTTCCAAACTAAACGAATTCGAAGCCCTCGTTGCCGCCGCCGCCGCCCGCCGC GCCCAAGCCGGCGACGCTCCTCCTCCCACGCCCCCTCATGTCCTATCGGCCGAAACAATCATTGCCGCCCACTCC CACGCCGCCCTTGACCCAATCCTCTCCTCCACCACTCTGCGCCTCGCCCAGCGCCGCGCCCAAAACGCCCGTCTG GTGGATTGCCTCGCTCAGCAGACGGCTGCCATGGACGCCCTTTTTGCTCGCCTTGACGAGGCCAAGGCAGACGTG GTGGCTGCGGCGCAGGCTCTCGACGCGGCTAATGATGGCTTGTCTTGTGTGGCCATTGGTCATGGCGTGGCTGGC GCTGCTGCTGCTGCTGCTGCTCATCATGGCAATGCGCCTGGTGCTTCCGCCGCCACTGACGCGACCGCTTCAGCT GCTCACTCCCTCGATTCACCCAAAGACCCTCCCGATGCTGCAGACACTGCAGACACTGCCCTCTCATAG
Gene	>OphauB2\|1351 ATGCCAACCCCCGACCCCGAACCCTCGGCCCCCCTCCCCGGCCCGCGCGCCACCCGCCTCGCCGAAACGTTTAAC CACGCCCTCTTGCGCACCCTGCAGCGCGTCAGCAATCCATCTGGCTTTGCTGCTTGTTTTGCCACGATTGATGCG CCAGATGTGCTGCGCGTGGTGCAGGAGCAAATGGTGAAGCTGCTGAGTGACAAGTGTCAGGTTTGTGTTTTCTTC TTCTCTTTTTCTTTTATCCACTCTTTATAAAAAAAAAATACATATATACACACACACATATATATATATAACAAG AAAAAAAAAAAGGGAAAAAAAGGGCTAATAGACATGTAGAAGGAATTTCAGCGCATCATGGATAGTCGCGACCTT GTTTCCAAACTAAACGAATTCGAAGCCCTCGTTGCCGCCGCCGCCGCCCGCCGCGCCCAAGCCGGCGACGCTCCT CCTCCCACGCCGTACACCCATCTTCCCCCCCCCTCTCTCTACTCTCTTGCACAAAGCGGCTAATATAAACTCTTG ACTCATAGCCCTCATGTCCTATCGGCCGAAACAATCATTGCCGCCCACTCCCACGCCGCCCTTGACCCAATCCTC TCCTCCACCACTCTGCGCCTCGCCCAGCGCCGCGCCCAAAACGCCCGTCTGGTGGATTGCCTCGCTCAGCAGACG GCTGCCATGGACGCCCTTTTTGCTCGCCTTGACGAGGCCAAGGCAGACGTGGTGGCTGCGGCGCAGGCTCTCGAC GCGGCTAATGATGGCTTGTCTTGTGTGGCCATTGGTCATGGCGTGGCTGGCGCTGCTGCTGCTGCTGCTGCTCAT CATGGCAATGCGCCTGGTGCTTCCGCCGCCACTGACGCGACCGCTTCAGCTGCTCACTCCCTCGATTCACCCAAA GACCCTCCCGATGCTGCAGACACTGCAGACACTGCCCTCTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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